RNA–Protein interactions for RNA: ENST00000640900.1

SCARB2-225, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 531 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-225ENST00000640900 GPNMBQ14956 572 aa10.06□□□□□ -0.8
SCARB2-225ENST00000640900 AMHR2Q16671 573 aa10.06□□□□□ -0.8
SCARB2-225ENST00000640900 LRRC26Q2I0M4 334 aa10.06□□□□□ -0.8
SCARB2-225ENST00000640900 ODR4Q5SWX8 454 aa10.06□□□□□ -0.8
SCARB2-225ENST00000640900 MAEAQ7L5Y9 396 aa10.06□□□□□ -0.8
SCARB2-225ENST00000640900 KSR1Q8IVT5 923 aa10.06□□□□□ -0.8
SCARB2-225ENST00000640900 ADSSL1Q8N142 457 aa10.06□□□□□ -0.8
SCARB2-225ENST00000640900 GUF1Q8N442 669 aaKnown RBP10.06□□□□□ -0.8
SCARB2-225ENST00000640900 MYCT1Q8N699 235 aa10.06□□□□□ -0.8
SCARB2-225ENST00000640900 METTL13Q8N6R0 699 aa10.06□□□□□ -0.8
SCARB2-225ENST00000640900 MLKLQ8NB16 471 aa10.06□□□□□ -0.8
SCARB2-225ENST00000640900 CAGE1Q8TC20 777 aa10.06□□□□□ -0.8
SCARB2-225ENST00000640900 DNAJB3Q8WWF6 145 aa10.06□□□□□ -0.8
SCARB2-225ENST00000640900 VTI1AQ96AJ9 217 aa10.06□□□□□ -0.8
SCARB2-225ENST00000640900 HVCN1Q96D96 273 aa10.06□□□□□ -0.8
SCARB2-225ENST00000640900 MED15Q96RN5 788 aa10.06□□□□□ -0.8
SCARB2-225ENST00000640900 MAP7D2Q96T17 732 aa10.06□□□□□ -0.8
SCARB2-225ENST00000640900 FZD8Q9H461 694 aa10.06□□□□□ -0.8
SCARB2-225ENST00000640900 CDHR5Q9HBB8 845 aa10.06□□□□□ -0.8
SCARB2-225ENST00000640900 EXOC1Q9NV70 894 aa10.06□□□□□ -0.8
SCARB2-225ENST00000640900 UBE4BO95155 1302 aa10.06□□□□□ -0.8
SCARB2-225ENST00000640900 H0YCG3 227 aa10.05□□□□□ -0.8
SCARB2-225ENST00000640900 DARSP14868 501 aaKnown RBP10.05□□□□□ -0.8
SCARB2-225ENST00000640900 NMT1P30419 496 aaKnown RBP10.05□□□□□ -0.8
SCARB2-225ENST00000640900 ABCD1P33897 745 aa10.05□□□□□ -0.8
SCARB2-225ENST00000640900 PRCPP42785 496 aa10.05□□□□□ -0.8
SCARB2-225ENST00000640900 PSEN1P49768 467 aa10.05□□□□□ -0.8
SCARB2-225ENST00000640900 EFNA5P52803 228 aa10.05□□□□□ -0.8
SCARB2-225ENST00000640900 CRYBB1P53674 252 aaPredicted RBP10.05□□□□□ -0.8
SCARB2-225ENST00000640900 NLRP11P59045 1033 aaKnown RBP10.05□□□□□ -0.8
SCARB2-225ENST00000640900 MCCD1P59942 119 aaPredicted RBP10.05□□□□□ -0.8
SCARB2-225ENST00000640900 MRPS6P82932 125 aaKnown RBP10.05□□□□□ -0.8
SCARB2-225ENST00000640900 MBTD1Q05BQ5 628 aa10.05□□□□□ -0.8
SCARB2-225ENST00000640900 TFDP1Q14186 410 aa10.05□□□□□ -0.8
SCARB2-225ENST00000640900 PCBP1Q15365 356 aaKnown RBP eCLIP10.05□□□□□ -0.8
SCARB2-225ENST00000640900 ZCWPW2Q504Y3 356 aa10.05□□□□□ -0.8
SCARB2-225ENST00000640900 FAM47CQ5HY64 1035 aa10.05□□□□□ -0.8
SCARB2-225ENST00000640900 FAM43BQ6ZT52 329 aaPredicted RBP10.05□□□□□ -0.8
SCARB2-225ENST00000640900 HAUS6Q7Z4H7 955 aa10.05□□□□□ -0.8
SCARB2-225ENST00000640900 SRGAP1Q7Z6B7 1085 aa10.05□□□□□ -0.8
SCARB2-225ENST00000640900 RHPN2Q8IUC4 686 aa10.05□□□□□ -0.8
SCARB2-225ENST00000640900 MAP4K3Q8IVH8 894 aa10.05□□□□□ -0.8
SCARB2-225ENST00000640900 FAM178BQ8IXR5 827 aa10.05□□□□□ -0.8
SCARB2-225ENST00000640900 ZC3H3Q8IXZ2 948 aaKnown RBP10.05□□□□□ -0.8
SCARB2-225ENST00000640900 RNF149Q8NC42 400 aa10.05□□□□□ -0.8
SCARB2-225ENST00000640900 VWCEQ96DN2 955 aa10.05□□□□□ -0.8
SCARB2-225ENST00000640900 IFT74Q96LB3 600 aa10.05□□□□□ -0.8
SCARB2-225ENST00000640900 CELF4Q9BZC1 486 aaKnown RBP10.05□□□□□ -0.8
SCARB2-225ENST00000640900 KCTD10Q9H3F6 313 aa10.05□□□□□ -0.8
SCARB2-225ENST00000640900 MINDY3Q9H8M7 445 aa10.05□□□□□ -0.8
SCARB2-225ENST00000640900 MRPL44Q9H9J2 332 aaKnown RBP10.05□□□□□ -0.8
SCARB2-225ENST00000640900 SLC39A2Q9NP94 309 aa10.05□□□□□ -0.8
SCARB2-225ENST00000640900 GDAQ9Y2T3 454 aa10.05□□□□□ -0.8
SCARB2-225ENST00000640900 PHLPP2Q6ZVD8 1323 aa10.05□□□□□ -0.8
SCARB2-225ENST00000640900 ZMYM2Q9UBW7 1377 aa10.04□□□□□ -0.8
SCARB2-225ENST00000640900 ALPK3Q96L96 1907 aa10.04□□□□□ -0.8
SCARB2-225ENST00000640900 A0A087WZ62 844 aa10.04□□□□□ -0.8
SCARB2-225ENST00000640900 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.04□□□□□ -0.8
SCARB2-225ENST00000640900 SYCE3A1L190 88 aa10.04□□□□□ -0.8
SCARB2-225ENST00000640900 BIN1O00499 593 aa10.04□□□□□ -0.8
SCARB2-225ENST00000640900 ABLIM1O14639 778 aa10.04□□□□□ -0.8
SCARB2-225ENST00000640900 KIAA0355O15063 1070 aa10.04□□□□□ -0.8
SCARB2-225ENST00000640900 SLC16A4O15374 487 aa10.04□□□□□ -0.8
SCARB2-225ENST00000640900 TGFB1I1O43294 461 aa10.04□□□□□ -0.8
SCARB2-225ENST00000640900 EDN1P05305 212 aa10.04□□□□□ -0.8
SCARB2-225ENST00000640900 MYBP10242 640 aa10.04□□□□□ -0.8
SCARB2-225ENST00000640900 CKBP12277 381 aa10.04□□□□□ -0.8
SCARB2-225ENST00000640900 PROZP22891 400 aa10.04□□□□□ -0.8
SCARB2-225ENST00000640900 EIF4BP23588 611 aaKnown RBP10.04□□□□□ -0.8
SCARB2-225ENST00000640900 PPP1R2P41236 205 aa10.04□□□□□ -0.8
SCARB2-225ENST00000640900 SMTNP53814 917 aa10.04□□□□□ -0.8
SCARB2-225ENST00000640900 TYRO3Q06418 890 aa10.04□□□□□ -0.8
SCARB2-225ENST00000640900 KCNA1Q09470 495 aa10.04□□□□□ -0.8
SCARB2-225ENST00000640900 MBTPS1Q14703 1052 aa10.04□□□□□ -0.8
SCARB2-225ENST00000640900 NFIL3Q16649 462 aa10.04□□□□□ -0.8
SCARB2-225ENST00000640900 DPCR1Q3MIW9 517 aa10.04□□□□□ -0.8
SCARB2-225ENST00000640900 TRIM60Q495X7 471 aa10.04□□□□□ -0.8
SCARB2-225ENST00000640900 L1TD1Q5T7N2 865 aaKnown RBP10.04□□□□□ -0.8
SCARB2-225ENST00000640900 CENPPQ6IPU0 288 aa10.04□□□□□ -0.8
SCARB2-225ENST00000640900 RSPH3Q86UC2 560 aa10.04□□□□□ -0.8
SCARB2-225ENST00000640900 SMYD4Q8IYR2 804 aaPredicted RBP10.04□□□□□ -0.8
SCARB2-225ENST00000640900 TMEM40Q8WWA1 233 aa10.04□□□□□ -0.8
SCARB2-225ENST00000640900 CCDC47Q96A33 483 aaKnown RBP10.04□□□□□ -0.8
SCARB2-225ENST00000640900 FDXACB1Q9BRP7 624 aaPredicted RBP10.04□□□□□ -0.8
SCARB2-225ENST00000640900 KIFC3Q9BVG8 833 aa10.04□□□□□ -0.8
SCARB2-225ENST00000640900 NOC4LQ9BVI4 516 aaKnown RBP10.04□□□□□ -0.8
SCARB2-225ENST00000640900 FAM49AQ9H0Q0 323 aaPredicted RBP10.04□□□□□ -0.8
SCARB2-225ENST00000640900 C2orf40Q9H1Z8 148 aa10.04□□□□□ -0.8
SCARB2-225ENST00000640900 PTPRHQ9HD43 1115 aa10.04□□□□□ -0.8
SCARB2-225ENST00000640900 KMT5AQ9NQR1 393 aa10.04□□□□□ -0.8
SCARB2-225ENST00000640900 TBX20Q9UMR3 447 aa10.04□□□□□ -0.8
SCARB2-225ENST00000640900 AKT3Q9Y243 479 aa10.04□□□□□ -0.8
SCARB2-225ENST00000640900 TRPV2Q9Y5S1 764 aa10.04□□□□□ -0.8
SCARB2-225ENST00000640900 STYXL1Q9Y6J8 313 aa10.04□□□□□ -0.8
SCARB2-225ENST00000640900 DENND3A2RUS2 1198 aa10.03□□□□□ -0.8
SCARB2-225ENST00000640900 LRRIQ4A6NIV6 560 aa10.03□□□□□ -0.8
SCARB2-225ENST00000640900 DCDC2CA8MYV0 355 aa10.03□□□□□ -0.8
SCARB2-225ENST00000640900 ACKR2O00590 384 aa10.03□□□□□ -0.8
SCARB2-225ENST00000640900 SRGAP2CP0DJJ0 459 aa10.03□□□□□ -0.8
SCARB2-225ENST00000640900 ERCC5P28715 1186 aaPredicted RBP10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms