RNA–Protein interactions for RNA: ENST00000640748.1

ERGIC3-220, Transcript of ERGIC and golgi 3, humanhuman

TSL 5 BASIC

Gene ERGIC3, Length 832 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-220ENST00000640748 BTG3Q14201 252 aaPredicted RBP13.2□□□□□ -0.3
ERGIC3-220ENST00000640748 SMAD2Q15796 467 aaKnown RBP13.2□□□□□ -0.3
ERGIC3-220ENST00000640748 KRT79Q5XKE5 535 aa13.2□□□□□ -0.3
ERGIC3-220ENST00000640748 RSPH3Q86UC2 560 aa13.2□□□□□ -0.3
ERGIC3-220ENST00000640748 MLKLQ8NB16 471 aa13.2□□□□□ -0.3
ERGIC3-220ENST00000640748 TRAPPC12Q8WVT3 735 aa13.2□□□□□ -0.3
ERGIC3-220ENST00000640748 HAS1Q92839 578 aa13.2□□□□□ -0.3
ERGIC3-220ENST00000640748 PLVAPQ9BX97 442 aa13.2□□□□□ -0.3
ERGIC3-220ENST00000640748 FAM49AQ9H0Q0 323 aaPredicted RBP13.2□□□□□ -0.3
ERGIC3-220ENST00000640748 TMX1Q9H3N1 280 aa13.2□□□□□ -0.3
ERGIC3-220ENST00000640748 JPH1Q9HDC5 661 aaPredicted RBP13.2□□□□□ -0.3
ERGIC3-220ENST00000640748 ALG13Q9NP73 1137 aaKnown RBP13.2□□□□□ -0.3
ERGIC3-220ENST00000640748 KCNMB3Q9NPA1 279 aa13.2□□□□□ -0.3
ERGIC3-220ENST00000640748 KCNH7Q9NS40 1196 aa13.2□□□□□ -0.3
ERGIC3-220ENST00000640748 PCDHA12Q9UN75 941 aa13.2□□□□□ -0.3
ERGIC3-220ENST00000640748 PLAGL2Q9UPG8 496 aa13.2□□□□□ -0.3
ERGIC3-220ENST00000640748 RWDD3Q9Y3V2 267 aa13.2□□□□□ -0.3
ERGIC3-220ENST00000640748 WDFY4Q6ZS81 3184 aa13.2□□□□□ -0.3
ERGIC3-220ENST00000640748 KAT6AQ92794 2004 aa13.2□□□□□ -0.3
ERGIC3-220ENST00000640748 IKBKBO14920 756 aa13.19□□□□□ -0.3
ERGIC3-220ENST00000640748 MAFGO15525 162 aa13.19□□□□□ -0.3
ERGIC3-220ENST00000640748 MBTPS2O43462 519 aa13.19□□□□□ -0.3
ERGIC3-220ENST00000640748 PLCG1P19174 1290 aa13.19□□□□□ -0.3
ERGIC3-220ENST00000640748 TMEM62Q0P6H9 643 aa13.19□□□□□ -0.3
ERGIC3-220ENST00000640748 ITGB3BPQ13352 177 aaPredicted RBP13.19□□□□□ -0.3
ERGIC3-220ENST00000640748 PLCB4Q15147 1175 aa13.19□□□□□ -0.3
ERGIC3-220ENST00000640748 CLUL1Q15846 466 aa13.19□□□□□ -0.3
ERGIC3-220ENST00000640748 PRR16Q569H4 304 aa13.19□□□□□ -0.3
ERGIC3-220ENST00000640748 CT47A1Q5JQC4 288 aaPredicted RBP13.19□□□□□ -0.3
ERGIC3-220ENST00000640748 CDK5RAP3Q96JB5 506 aa13.19□□□□□ -0.3
ERGIC3-220ENST00000640748 FAM20AQ96MK3 541 aa13.19□□□□□ -0.3
ERGIC3-220ENST00000640748 MXRA8Q9BRK3 442 aa13.19□□□□□ -0.3
ERGIC3-220ENST00000640748 MMTAG2Q9BU76 263 aaKnown RBP13.19□□□□□ -0.3
ERGIC3-220ENST00000640748 RMND1Q9NWS8 449 aa13.19□□□□□ -0.3
ERGIC3-220ENST00000640748 SLC9A2Q9UBY0 812 aa13.19□□□□□ -0.3
ERGIC3-220ENST00000640748 STK17AQ9UEE5 414 aa13.19□□□□□ -0.3
ERGIC3-220ENST00000640748 PCDHA2Q9Y5H9 948 aa13.19□□□□□ -0.3
ERGIC3-220ENST00000640748 STK24Q9Y6E0 443 aa13.19□□□□□ -0.3
ERGIC3-220ENST00000640748 IGSF9BQ9UPX0 1349 aa13.18□□□□□ -0.3
ERGIC3-220ENST00000640748 KDM3AQ9Y4C1 1321 aa13.18□□□□□ -0.3
ERGIC3-220ENST00000640748 RRN3P2A6NIE6 340 aa13.18□□□□□ -0.3
ERGIC3-220ENST00000640748 CSPG5O95196 566 aa13.18□□□□□ -0.3
ERGIC3-220ENST00000640748 ITGB1P05556 798 aa13.18□□□□□ -0.3
ERGIC3-220ENST00000640748 ARP10275 920 aa13.18□□□□□ -0.3
ERGIC3-220ENST00000640748 GATMP50440 423 aa13.18□□□□□ -0.3
ERGIC3-220ENST00000640748 ACTR2P61160 394 aa13.18□□□□□ -0.3
ERGIC3-220ENST00000640748 AMPD3Q01432 767 aa13.18□□□□□ -0.3
ERGIC3-220ENST00000640748 ADAM15Q13444 863 aa13.18□□□□□ -0.3
ERGIC3-220ENST00000640748 NAALADL2Q58DX5 795 aa13.18□□□□□ -0.3
ERGIC3-220ENST00000640748 SARM1Q6SZW1 724 aa13.18□□□□□ -0.3
ERGIC3-220ENST00000640748 ADGRD2Q7Z7M1 963 aa13.18□□□□□ -0.3
ERGIC3-220ENST00000640748 NPAS4Q8IUM7 802 aa13.18□□□□□ -0.3
ERGIC3-220ENST00000640748 CMTR2Q8IYT2 770 aaKnown RBP13.18□□□□□ -0.3
ERGIC3-220ENST00000640748 ETNPPLQ8TBG4 499 aa13.18□□□□□ -0.3
ERGIC3-220ENST00000640748 SPPL3Q8TCT6 385 aa13.18□□□□□ -0.3
ERGIC3-220ENST00000640748 SNX29Q8TEQ0 813 aa13.18□□□□□ -0.3
ERGIC3-220ENST00000640748 STAMQ92783 540 aa13.18□□□□□ -0.3
ERGIC3-220ENST00000640748 P2RX5Q93086 422 aa13.18□□□□□ -0.3
ERGIC3-220ENST00000640748 CCDC47Q96A33 483 aaKnown RBP13.18□□□□□ -0.3
ERGIC3-220ENST00000640748 PLIN2Q99541 437 aa13.18□□□□□ -0.3
ERGIC3-220ENST00000640748 KBTBD4Q9NVX7 518 aa13.18□□□□□ -0.3
ERGIC3-220ENST00000640748 PADI3Q9ULW8 664 aa13.18□□□□□ -0.3
ERGIC3-220ENST00000640748 FAM50BQ9Y247 325 aa13.18□□□□□ -0.3
ERGIC3-220ENST00000640748 TRPV2Q9Y5S1 764 aa13.18□□□□□ -0.3
ERGIC3-220ENST00000640748 SQORQ9Y6N5 450 aa13.18□□□□□ -0.3
ERGIC3-220ENST00000640748 NFASCO94856 1347 aa13.17□□□□□ -0.3
ERGIC3-220ENST00000640748 POTEMA6NI47 508 aa13.17□□□□□ -0.3
ERGIC3-220ENST00000640748 AP5Z1O43299 807 aa13.17□□□□□ -0.3
ERGIC3-220ENST00000640748 ATG7O95352 703 aa13.17□□□□□ -0.3
ERGIC3-220ENST00000640748 CCNE2O96020 404 aa13.17□□□□□ -0.3
ERGIC3-220ENST00000640748 RPN1P04843 607 aaKnown RBP13.17□□□□□ -0.3
ERGIC3-220ENST00000640748 RPLP2P05387 115 aaKnown RBP13.17□□□□□ -0.3
ERGIC3-220ENST00000640748 PTMAP06454 111 aaKnown RBP13.17□□□□□ -0.3
ERGIC3-220ENST00000640748 BMP6P22004 513 aa13.17□□□□□ -0.3
ERGIC3-220ENST00000640748 CASP1P29466 404 aa13.17□□□□□ -0.3
ERGIC3-220ENST00000640748 MYL5Q02045 173 aa13.17□□□□□ -0.3
ERGIC3-220ENST00000640748 SMAD4Q13485 552 aaKnown RBP13.17□□□□□ -0.3
ERGIC3-220ENST00000640748 CUL4BQ13620 913 aa13.17□□□□□ -0.3
ERGIC3-220ENST00000640748 HS1BP3Q53T59 392 aa13.17□□□□□ -0.3
ERGIC3-220ENST00000640748 IER5Q5VY09 327 aa13.17□□□□□ -0.3
ERGIC3-220ENST00000640748 PLPPR4Q7Z2D5 763 aa13.17□□□□□ -0.3
ERGIC3-220ENST00000640748 KLHL23Q8NBE8 558 aa13.17□□□□□ -0.3
ERGIC3-220ENST00000640748 MSLNLQ96KJ4 702 aa13.17□□□□□ -0.3
ERGIC3-220ENST00000640748 PNMA5Q96PV4 448 aa13.17□□□□□ -0.3
ERGIC3-220ENST00000640748 UIMC1Q96RL1 719 aa13.17□□□□□ -0.3
ERGIC3-220ENST00000640748 MTRQ99707 1265 aa13.17□□□□□ -0.3
ERGIC3-220ENST00000640748 CELF4Q9BZC1 486 aaKnown RBP13.17□□□□□ -0.3
ERGIC3-220ENST00000640748 TRIM5Q9C035 493 aa13.17□□□□□ -0.3
ERGIC3-220ENST00000640748 LRRC27Q9C0I9 530 aa13.17□□□□□ -0.3
ERGIC3-220ENST00000640748 NT5C3AQ9H0P0 336 aa13.17□□□□□ -0.3
ERGIC3-220ENST00000640748 BLZF1Q9H2G9 400 aa13.17□□□□□ -0.3
ERGIC3-220ENST00000640748 IGFLR1Q9H665 355 aa13.17□□□□□ -0.3
ERGIC3-220ENST00000640748 AGO4Q9HCK5 861 aaKnown RBP13.17□□□□□ -0.3
ERGIC3-220ENST00000640748 CLEC1BQ9P126 229 aa13.17□□□□□ -0.3
ERGIC3-220ENST00000640748 TRPC6Q9Y210 931 aa13.17□□□□□ -0.3
ERGIC3-220ENST00000640748 ZNF318Q5VUA4 2279 aa13.16□□□□□ -0.3
ERGIC3-220ENST00000640748 KIAA1671Q9BY89 1806 aa13.16□□□□□ -0.3
ERGIC3-220ENST00000640748 IGKV6D-21A0A0A0MT36 114 aa13.16□□□□□ -0.3
ERGIC3-220ENST00000640748 FAM86B1E9PN63 330 aa13.16□□□□□ -0.3
ERGIC3-220ENST00000640748 MEIS1O00470 390 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms