RNA–Protein interactions for RNA: ENST00000640499.1

VEGFA-231, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VEGFA, Length 1,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-231ENST00000640499 AXDND1Q5T1B0 1012 aaPredicted RBP29.57■■■□□ 2.32
VEGFA-231ENST00000640499 CDCA2Q69YH5 1023 aaPredicted RBP29.57■■■□□ 2.32
VEGFA-231ENST00000640499 ECHDC2Q86YB7 292 aa29.57■■■□□ 2.32
VEGFA-231ENST00000640499 MYO9BQ13459 2157 aa29.57■■■□□ 2.32
VEGFA-231ENST00000640499 ADGRA3Q8IWK6 1321 aa29.56■■■□□ 2.32
VEGFA-231ENST00000640499 NPHP3-ACAD11A0A0J9YXS1 232 aa29.56■■■□□ 2.32
VEGFA-231ENST00000640499 A0A0U1RQF3 1178 aa29.56■■■□□ 2.32
VEGFA-231ENST00000640499 HIP1RO75146 1068 aa29.56■■■□□ 2.32
VEGFA-231ENST00000640499 ATF7P17544 494 aaPredicted RBP29.56■■■□□ 2.32
VEGFA-231ENST00000640499 IBSPP21815 317 aaPredicted RBP29.56■■■□□ 2.32
VEGFA-231ENST00000640499 NAALADL2Q58DX5 795 aa29.56■■■□□ 2.32
VEGFA-231ENST00000640499 UBXN11Q5T124 520 aa29.56■■■□□ 2.32
VEGFA-231ENST00000640499 ZNF598Q86UK7 904 aaKnown RBP29.56■■■□□ 2.32
VEGFA-231ENST00000640499 TRAIPQ9BWF2 469 aa29.56■■■□□ 2.32
VEGFA-231ENST00000640499 PRDM12Q9H4Q4 367 aa29.56■■■□□ 2.32
VEGFA-231ENST00000640499 PIN4Q9Y237 131 aaKnown RBP29.56■■■□□ 2.32
VEGFA-231ENST00000640499 LRRIQ4A6NIV6 560 aa29.55■■■□□ 2.32
VEGFA-231ENST00000640499 TSPAN1O60635 241 aa29.55■■■□□ 2.32
VEGFA-231ENST00000640499 SSBP05455 408 aaKnown RBP eCLIP29.55■■■□□ 2.32
VEGFA-231ENST00000640499 GUCY2CP25092 1073 aa29.55■■■□□ 2.32
VEGFA-231ENST00000640499 MCM6Q14566 821 aa29.55■■■□□ 2.32
VEGFA-231ENST00000640499 ATL3Q6DD88 541 aa29.55■■■□□ 2.32
VEGFA-231ENST00000640499 MYLIPQ8WY64 445 aa29.55■■■□□ 2.32
VEGFA-231ENST00000640499 RAD54LQ92698 747 aa29.55■■■□□ 2.32
VEGFA-231ENST00000640499 KIFAP3Q92845 792 aa29.55■■■□□ 2.32
VEGFA-231ENST00000640499 KIFC3Q9BVG8 833 aa29.55■■■□□ 2.32
VEGFA-231ENST00000640499 ELAC1Q9H777 363 aaKnown RBP29.55■■■□□ 2.32
VEGFA-231ENST00000640499 TMEM161AQ9NX61 479 aa29.55■■■□□ 2.32
VEGFA-231ENST00000640499 RCOR1Q9UKL0 485 aa29.55■■■□□ 2.32
VEGFA-231ENST00000640499 PCDHB7Q9Y5E2 793 aa29.55■■■□□ 2.32
VEGFA-231ENST00000640499 TTLL13PA6NNM8 815 aa29.54■■■□□ 2.32
VEGFA-231ENST00000640499 INO80B-WBP1J3KQ70 363 aa29.54■■■□□ 2.32
VEGFA-231ENST00000640499 RFXAPO00287 272 aa29.54■■■□□ 2.32
VEGFA-231ENST00000640499 B4GALT5O43286 388 aa29.54■■■□□ 2.32
VEGFA-231ENST00000640499 STAG3L1P0CL83 205 aa29.54■■■□□ 2.32
VEGFA-231ENST00000640499 NAMPTP43490 491 aa29.54■■■□□ 2.32
VEGFA-231ENST00000640499 ERVK-21P61565 698 aa29.54■■■□□ 2.32
VEGFA-231ENST00000640499 C17orf80Q9BSJ5 609 aa29.54■■■□□ 2.32
VEGFA-231ENST00000640499 FZD8Q9H461 694 aa29.54■■■□□ 2.32
VEGFA-231ENST00000640499 FNDC1Q4ZHG4 1894 aaPredicted RBP29.54■■■□□ 2.32
VEGFA-231ENST00000640499 SFI1A8K8P3 1242 aa29.53■■■□□ 2.32
VEGFA-231ENST00000640499 EDN1P05305 212 aa29.53■■■□□ 2.32
VEGFA-231ENST00000640499 FGFR1P11362 822 aa29.53■■■□□ 2.32
VEGFA-231ENST00000640499 RAD51AP2Q09MP3 1159 aa29.53■■■□□ 2.32
VEGFA-231ENST00000640499 ADGRE1Q14246 886 aa29.53■■■□□ 2.32
VEGFA-231ENST00000640499 SHC4Q6S5L8 630 aa29.53■■■□□ 2.32
VEGFA-231ENST00000640499 CCDC113Q9H0I3 377 aa29.53■■■□□ 2.32
VEGFA-231ENST00000640499 DACT1Q9NYF0 836 aa29.53■■■□□ 2.32
VEGFA-231ENST00000640499 LRFN2Q9ULH4 789 aa29.53■■■□□ 2.32
VEGFA-231ENST00000640499 TRANK1O15050 2925 aa29.53■■■□□ 2.32
VEGFA-231ENST00000640499 ARNTL2Q8WYA1 636 aa29.52■■■□□ 2.32
VEGFA-231ENST00000640499 CPB2Q96IY4 423 aa29.52■■■□□ 2.32
VEGFA-231ENST00000640499 PANK2Q9BZ23 570 aa29.52■■■□□ 2.32
VEGFA-231ENST00000640499 PCDHA7Q9UN72 937 aa29.52■■■□□ 2.32
VEGFA-231ENST00000640499 USP20Q9Y2K6 914 aa29.52■■■□□ 2.32
VEGFA-231ENST00000640499 ARF4P18085 180 aaPredicted RBP29.51■■■□□ 2.31
VEGFA-231ENST00000640499 NPTX2P47972 431 aa29.51■■■□□ 2.31
VEGFA-231ENST00000640499 CACNB1Q02641 598 aaPredicted RBP29.51■■■□□ 2.31
VEGFA-231ENST00000640499 DHX8Q14562 1220 aaKnown RBP29.51■■■□□ 2.31
VEGFA-231ENST00000640499 PCBP1Q15365 356 aaKnown RBP eCLIP29.51■■■□□ 2.314e-7■■□□□ 11.7
VEGFA-231ENST00000640499 TWF2Q6IBS0 349 aaKnown RBP29.51■■■□□ 2.31
VEGFA-231ENST00000640499 PPP4R3CPQ6ZMV5 832 aa29.51■■■□□ 2.31
VEGFA-231ENST00000640499 FAM105AQ9NUU6 356 aa29.51■■■□□ 2.31
VEGFA-231ENST00000640499 CFAP45Q9UL16 551 aa29.51■■■□□ 2.31
VEGFA-231ENST00000640499 TCHHQ07283 1943 aa29.5■■■□□ 2.31
VEGFA-231ENST00000640499 MEIS3P2A8K0S8 358 aa29.5■■■□□ 2.31
VEGFA-231ENST00000640499 LPXNO60711 386 aa29.5■■■□□ 2.31
VEGFA-231ENST00000640499 CUTAO60888 179 aa29.5■■■□□ 2.31
VEGFA-231ENST00000640499 ZNF623O75123 536 aa29.5■■■□□ 2.31
VEGFA-231ENST00000640499 PEX3P56589 373 aa29.5■■■□□ 2.31
VEGFA-231ENST00000640499 FAM187BQ17R55 369 aa29.5■■■□□ 2.31
VEGFA-231ENST00000640499 PAN2Q504Q3 1202 aaKnown RBP29.5■■■□□ 2.31
VEGFA-231ENST00000640499 CLLU1OSQ5K130 101 aa29.5■■■□□ 2.31
VEGFA-231ENST00000640499 GPBP1Q86WP2 473 aa29.5■■■□□ 2.31
VEGFA-231ENST00000640499 CMTR2Q8IYT2 770 aaKnown RBP29.5■■■□□ 2.31
VEGFA-231ENST00000640499 LARP4BQ92615 738 aaKnown RBP29.5■■■□□ 2.31
VEGFA-231ENST00000640499 TGS1Q96RS0 853 aaKnown RBP29.5■■■□□ 2.31
VEGFA-231ENST00000640499 TIPINQ9BVW5 301 aa29.5■■■□□ 2.31
VEGFA-231ENST00000640499 KCND2Q9NZV8 630 aa29.5■■■□□ 2.31
VEGFA-231ENST00000640499 MTUS1Q9ULD2 1270 aa29.5■■■□□ 2.31
VEGFA-231ENST00000640499 MRPL42Q9Y6G3 142 aaKnown RBP29.5■■■□□ 2.31
VEGFA-231ENST00000640499 ERLIN2O94905 339 aa29.49■■■□□ 2.31
VEGFA-231ENST00000640499 EOMESO95936 686 aa29.49■■■□□ 2.31
VEGFA-231ENST00000640499 BTG3Q14201 252 aaPredicted RBP29.49■■■□□ 2.31
VEGFA-231ENST00000640499 PPP2R5AQ15172 486 aa29.49■■■□□ 2.31
VEGFA-231ENST00000640499 FIBCD1Q8N539 461 aa29.49■■■□□ 2.31
VEGFA-231ENST00000640499 RASSF8Q8NHQ8 419 aa29.49■■■□□ 2.31
VEGFA-231ENST00000640499 DEPTORQ8TB45 409 aa29.49■■■□□ 2.31
VEGFA-231ENST00000640499 KCNG4Q8TDN1 519 aa29.49■■■□□ 2.31
VEGFA-231ENST00000640499 CLP1Q92989 425 aaKnown RBP29.49■■■□□ 2.31
VEGFA-231ENST00000640499 LPPQ93052 612 aa29.49■■■□□ 2.31
VEGFA-231ENST00000640499 IFT74Q96LB3 600 aa29.49■■■□□ 2.31
VEGFA-231ENST00000640499 CASD1Q96PB1 797 aa29.49■■■□□ 2.31
VEGFA-231ENST00000640499 EIF2AQ9BY44 585 aaKnown RBP29.49■■■□□ 2.31
VEGFA-231ENST00000640499 HCSTQ9UBK5 93 aa29.49■■■□□ 2.31
VEGFA-231ENST00000640499 CCDC39Q9UFE4 941 aa29.49■■■□□ 2.31
VEGFA-231ENST00000640499 PCDHB2Q9Y5E7 798 aa29.49■■■□□ 2.31
VEGFA-231ENST00000640499 NLRC5Q86WI3 1866 aa29.48■■■□□ 2.31
VEGFA-231ENST00000640499 KIAA1671Q9BY89 1806 aa29.48■■■□□ 2.31
VEGFA-231ENST00000640499 AXLP30530 894 aa29.48■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms