RNA–Protein interactions for RNA: ENST00000640058.1

CCDC7-216, Transcript of coiled-coil domain containing 7, humanhuman

TSL 3

Gene CCDC7, Length 251 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-216ENST00000640058 ELAVL1Q15717 326 aaKnown RBP6.91□□□□□ -1.3
CCDC7-216ENST00000640058 GAGE13Q4V321 117 aa6.91□□□□□ -1.3
CCDC7-216ENST00000640058 MIIPQ5JXC2 388 aa6.91□□□□□ -1.3
CCDC7-216ENST00000640058 IGFL4Q6B9Z1 124 aa6.91□□□□□ -1.3
CCDC7-216ENST00000640058 ZNF610Q8N9Z0 462 aa6.91□□□□□ -1.3
CCDC7-216ENST00000640058 PIK3C3Q8NEB9 887 aa6.91□□□□□ -1.3
CCDC7-216ENST00000640058 ARL8AQ96BM9 186 aa6.91□□□□□ -1.3
CCDC7-216ENST00000640058 MPHOSPH9Q99550 1183 aa6.91□□□□□ -1.3
CCDC7-216ENST00000640058 ANO3Q9BYT9 981 aa6.91□□□□□ -1.3
CCDC7-216ENST00000640058 EMC7Q9NPA0 242 aa6.91□□□□□ -1.3
CCDC7-216ENST00000640058 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.91□□□□□ -1.3
CCDC7-216ENST00000640058 USP36Q9P275 1121 aaKnown RBP6.91□□□□□ -1.3
CCDC7-216ENST00000640058 PRSS38A1L453 326 aa6.9□□□□□ -1.3
CCDC7-216ENST00000640058 KDM1AO60341 852 aa6.9□□□□□ -1.3
CCDC7-216ENST00000640058 RAB11FIP3O75154 756 aa6.9□□□□□ -1.3
CCDC7-216ENST00000640058 FSBPO95073 299 aa6.9□□□□□ -1.3
CCDC7-216ENST00000640058 GAAP10253 952 aa6.9□□□□□ -1.3
CCDC7-216ENST00000640058 KIR2DL3P43628 341 aa6.9□□□□□ -1.3
CCDC7-216ENST00000640058 GYS2P54840 703 aa6.9□□□□□ -1.3
CCDC7-216ENST00000640058 DDB1Q16531 1140 aa6.9□□□□□ -1.3
CCDC7-216ENST00000640058 LSM12Q3MHD2 195 aaKnown RBP6.9□□□□□ -1.3
CCDC7-216ENST00000640058 FKBP15Q5T1M5 1219 aa6.9□□□□□ -1.3
CCDC7-216ENST00000640058 Q6ZRM9 215 aa6.9□□□□□ -1.3
CCDC7-216ENST00000640058 USP51Q70EK9 711 aa6.9□□□□□ -1.3
CCDC7-216ENST00000640058 CXorf67Q86X51 503 aaPredicted RBP6.9□□□□□ -1.3
CCDC7-216ENST00000640058 MB21D1Q8N884 522 aa6.9□□□□□ -1.3
CCDC7-216ENST00000640058 CDYL2Q8N8U2 506 aa6.9□□□□□ -1.3
CCDC7-216ENST00000640058 ING3Q9NXR8 418 aa6.9□□□□□ -1.3
CCDC7-216ENST00000640058 PPP2R3BQ9Y5P8 575 aa6.9□□□□□ -1.3
CCDC7-216ENST00000640058 CYP27B1O15528 508 aa6.89□□□□□ -1.31
CCDC7-216ENST00000640058 STC2O76061 302 aa6.89□□□□□ -1.31
CCDC7-216ENST00000640058 ZNF202O95125 648 aa6.89□□□□□ -1.31
CCDC7-216ENST00000640058 SLPIP03973 132 aa6.89□□□□□ -1.31
CCDC7-216ENST00000640058 PFKMP08237 780 aa6.89□□□□□ -1.31
CCDC7-216ENST00000640058 ACVRL1P37023 503 aa6.89□□□□□ -1.31
CCDC7-216ENST00000640058 PHC1P78364 1004 aa6.89□□□□□ -1.31
CCDC7-216ENST00000640058 CD69Q07108 199 aa6.89□□□□□ -1.31
CCDC7-216ENST00000640058 PPARAQ07869 468 aa6.89□□□□□ -1.31
CCDC7-216ENST00000640058 KLF10Q13118 480 aa6.89□□□□□ -1.31
CCDC7-216ENST00000640058 RRP1BQ14684 758 aaKnown RBP6.89□□□□□ -1.31
CCDC7-216ENST00000640058 MAN2A1Q16706 1144 aa6.89□□□□□ -1.31
CCDC7-216ENST00000640058 PLEKHG4Q58EX7 1191 aa6.89□□□□□ -1.31
CCDC7-216ENST00000640058 GPR158Q5T848 1215 aa6.89□□□□□ -1.31
CCDC7-216ENST00000640058 BROXQ5VW32 411 aa6.89□□□□□ -1.31
CCDC7-216ENST00000640058 ELOA2Q8IYF1 753 aaPredicted RBP6.89□□□□□ -1.31
CCDC7-216ENST00000640058 THEMISQ8N1K5 641 aaPredicted RBP6.89□□□□□ -1.31
CCDC7-216ENST00000640058 ANKRD35Q8N283 1001 aa6.89□□□□□ -1.31
CCDC7-216ENST00000640058 UBR7Q8N806 425 aa6.89□□□□□ -1.31
CCDC7-216ENST00000640058 USP7Q93009 1102 aa6.89□□□□□ -1.31
CCDC7-216ENST00000640058 OSBPL6Q9BZF3 934 aa6.89□□□□□ -1.31
CCDC7-216ENST00000640058 ING1Q9UK53 422 aaPredicted RBP6.89□□□□□ -1.31
CCDC7-216ENST00000640058 ID4P47928 161 aa6.88□□□□□ -1.31
CCDC7-216ENST00000640058 SCNN1GP51170 649 aa6.88□□□□□ -1.31
CCDC7-216ENST00000640058 NPEPPSP55786 919 aa6.88□□□□□ -1.31
CCDC7-216ENST00000640058 FAM214AQ32MH5 1076 aa6.88□□□□□ -1.31
CCDC7-216ENST00000640058 ATP13A4Q4VNC1 1196 aa6.88□□□□□ -1.31
CCDC7-216ENST00000640058 CCDC62Q6P9F0 684 aa6.88□□□□□ -1.31
CCDC7-216ENST00000640058 CMTM4Q8IZR5 234 aa6.88□□□□□ -1.31
CCDC7-216ENST00000640058 GAB3Q8WWW8 586 aa6.88□□□□□ -1.31
CCDC7-216ENST00000640058 SLC5A5Q92911 643 aa6.88□□□□□ -1.31
CCDC7-216ENST00000640058 MIEF2Q96C03 454 aa6.88□□□□□ -1.31
CCDC7-216ENST00000640058 PGBD4Q96DM1 585 aa6.88□□□□□ -1.31
CCDC7-216ENST00000640058 FDXACB1Q9BRP7 624 aaPredicted RBP6.88□□□□□ -1.31
CCDC7-216ENST00000640058 ALDH1A2O94788 518 aa6.87□□□□□ -1.31
CCDC7-216ENST00000640058 LY86O95711 162 aa6.87□□□□□ -1.31
CCDC7-216ENST00000640058 MGAT5Q09328 741 aa6.87□□□□□ -1.31
CCDC7-216ENST00000640058 CNGB1Q14028 1251 aaPredicted RBP6.87□□□□□ -1.31
CCDC7-216ENST00000640058 GIMAP6Q6P9H5 292 aa6.87□□□□□ -1.31
CCDC7-216ENST00000640058 FRMD7Q6ZUT3 714 aa6.87□□□□□ -1.31
CCDC7-216ENST00000640058 CACTINQ8WUQ7 758 aaKnown RBP6.87□□□□□ -1.31
CCDC7-216ENST00000640058 ZNF512Q96ME7 567 aaPredicted RBP6.87□□□□□ -1.31
CCDC7-216ENST00000640058 SORCS2Q96PQ0 1159 aa6.87□□□□□ -1.31
CCDC7-216ENST00000640058 MAPRE3Q9UPY8 281 aa6.87□□□□□ -1.31
CCDC7-216ENST00000640058 NOC2LQ9Y3T9 749 aaKnown RBP6.87□□□□□ -1.31
CCDC7-216ENST00000640058 TLDC2A0PJX2 215 aa6.86□□□□□ -1.31
CCDC7-216ENST00000640058 KRTAP23-1A1A580 65 aa6.86□□□□□ -1.31
CCDC7-216ENST00000640058 CYR61O00622 381 aa6.86□□□□□ -1.31
CCDC7-216ENST00000640058 CFBP00751 764 aa6.86□□□□□ -1.31
CCDC7-216ENST00000640058 XPAP23025 273 aaPredicted RBP6.86□□□□□ -1.31
CCDC7-216ENST00000640058 MANFP55145 182 aaKnown RBP6.86□□□□□ -1.31
CCDC7-216ENST00000640058 STRN3Q13033 797 aa6.86□□□□□ -1.31
CCDC7-216ENST00000640058 SPIDRQ14159 915 aa6.86□□□□□ -1.31
CCDC7-216ENST00000640058 HDGFL2Q7Z4V5 671 aaPredicted RBP6.86□□□□□ -1.31
CCDC7-216ENST00000640058 RNF180Q86T96 592 aa6.86□□□□□ -1.31
CCDC7-216ENST00000640058 THNSL2Q86YJ6 484 aa6.86□□□□□ -1.31
CCDC7-216ENST00000640058 TMPRSS6Q8IU80 811 aa6.86□□□□□ -1.31
CCDC7-216ENST00000640058 GSPT2Q8IYD1 628 aaKnown RBP6.86□□□□□ -1.31
CCDC7-216ENST00000640058 UNC5BQ8IZJ1 945 aa6.86□□□□□ -1.31
CCDC7-216ENST00000640058 GPR87Q9BY21 358 aa6.86□□□□□ -1.31
CCDC7-216ENST00000640058 PRDM12Q9H4Q4 367 aa6.86□□□□□ -1.31
CCDC7-216ENST00000640058 CEP72Q9P209 647 aa6.86□□□□□ -1.31
CCDC7-216ENST00000640058 NEMP1O14524 444 aa6.85□□□□□ -1.31
CCDC7-216ENST00000640058 NARSO43776 548 aaKnown RBP6.85□□□□□ -1.31
CCDC7-216ENST00000640058 SEC24DO94855 1032 aaPredicted RBP6.85□□□□□ -1.31
CCDC7-216ENST00000640058 LPLP06858 475 aa6.85□□□□□ -1.31
CCDC7-216ENST00000640058 CASRP41180 1078 aa6.85□□□□□ -1.31
CCDC7-216ENST00000640058 MAN2A2P49641 1150 aa6.85□□□□□ -1.31
CCDC7-216ENST00000640058 TRIM25Q14258 630 aaKnown RBP6.85□□□□□ -1.31
CCDC7-216ENST00000640058 CT83Q5H943 113 aa6.85□□□□□ -1.31
CCDC7-216ENST00000640058 TAF7LQ5H9L4 462 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms