RNA–Protein interactions for RNA: ENST00000639955.1

NECAP1-221, Transcript of NECAP endocytosis associated 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene NECAP1, Length 3,479 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-221ENST00000639955 NUCKS1Q9H1E3 243 aaKnown RBP8.33□□□□□ -1.08
NECAP1-221ENST00000639955 SEMA4AQ9H3S1 761 aa8.33□□□□□ -1.08
NECAP1-221ENST00000639955 PI4KBQ9UBF8 816 aa8.33□□□□□ -1.08
NECAP1-221ENST00000639955 PCDHGC5Q9Y5F6 944 aa8.33□□□□□ -1.08
NECAP1-221ENST00000639955 MYO3BQ8WXR4 1341 aa8.32□□□□□ -1.08
NECAP1-221ENST00000639955 RGS16O15492 202 aaPredicted RBP8.32□□□□□ -1.08
NECAP1-221ENST00000639955 MEFVO15553 781 aaPredicted RBP8.32□□□□□ -1.08
NECAP1-221ENST00000639955 KIF1CO43896 1103 aaKnown RBP8.32□□□□□ -1.08
NECAP1-221ENST00000639955 RPA1P27694 616 aa8.32□□□□□ -1.08
NECAP1-221ENST00000639955 SEZ6Q53EL9 994 aa8.32□□□□□ -1.08
NECAP1-221ENST00000639955 KIAA1755Q5JYT7 1200 aa8.32□□□□□ -1.08
NECAP1-221ENST00000639955 DENND2CQ68D51 928 aa8.32□□□□□ -1.08
NECAP1-221ENST00000639955 B4GALNT4Q76KP1 1039 aa8.32□□□□□ -1.08
NECAP1-221ENST00000639955 ARMCX6Q7L4S7 300 aa8.32□□□□□ -1.08
NECAP1-221ENST00000639955 WHAMMQ8TF30 809 aa8.32□□□□□ -1.08
NECAP1-221ENST00000639955 RAPGEF5Q92565 580 aa8.32□□□□□ -1.08
NECAP1-221ENST00000639955 ZNF653Q96CK0 615 aa8.32□□□□□ -1.08
NECAP1-221ENST00000639955 EPN3Q9H201 632 aa8.32□□□□□ -1.08
NECAP1-221ENST00000639955 CTNNAL1Q9UBT7 734 aa8.32□□□□□ -1.08
NECAP1-221ENST00000639955 FAM198AQ9UFP1 575 aa8.32□□□□□ -1.08
NECAP1-221ENST00000639955 COG5Q9UP83 839 aa8.32□□□□□ -1.08
NECAP1-221ENST00000639955 PCDHA2Q9Y5H9 948 aa8.32□□□□□ -1.08
NECAP1-221ENST00000639955 ROBO3Q96MS0 1386 aa8.32□□□□□ -1.08
NECAP1-221ENST00000639955 F8VZ95 297 aa8.32□□□□□ -1.08
NECAP1-221ENST00000639955 C21orf2O43822 256 aa8.32□□□□□ -1.08
NECAP1-221ENST00000639955 ECE2O60344 883 aa8.32□□□□□ -1.08
NECAP1-221ENST00000639955 SOX5P35711 763 aa8.32□□□□□ -1.08
NECAP1-221ENST00000639955 PEX19P40855 299 aa8.32□□□□□ -1.08
NECAP1-221ENST00000639955 PRAMEF18Q5VWM3 479 aa8.32□□□□□ -1.08
NECAP1-221ENST00000639955 MMS22LQ6ZRQ5 1243 aa8.32□□□□□ -1.08
NECAP1-221ENST00000639955 BARGINQ6ZT62 677 aa8.32□□□□□ -1.08
NECAP1-221ENST00000639955 TBC1D1Q86TI0 1168 aaPredicted RBP8.32□□□□□ -1.08
NECAP1-221ENST00000639955 SYT2Q8N9I0 419 aaPredicted RBP8.32□□□□□ -1.08
NECAP1-221ENST00000639955 COA1Q9GZY4 146 aa8.32□□□□□ -1.08
NECAP1-221ENST00000639955 ALG6Q9Y672 507 aa8.32□□□□□ -1.08
NECAP1-221ENST00000639955 ARAP2Q8WZ64 1704 aa8.32□□□□□ -1.08
NECAP1-221ENST00000639955 ABCA3Q99758 1704 aa8.31□□□□□ -1.08
NECAP1-221ENST00000639955 IRS2Q9Y4H2 1338 aa8.31□□□□□ -1.08
NECAP1-221ENST00000639955 KAT6AQ92794 2004 aa8.31□□□□□ -1.08
NECAP1-221ENST00000639955 PPP1R12AO14974 1030 aaPredicted RBP8.31□□□□□ -1.08
NECAP1-221ENST00000639955 CLDN3O15551 220 aa8.31□□□□□ -1.08
NECAP1-221ENST00000639955 PPIP5K2O43314 1243 aa8.31□□□□□ -1.08
NECAP1-221ENST00000639955 SGPL1O95470 568 aa8.31□□□□□ -1.08
NECAP1-221ENST00000639955 MMEP08473 750 aa8.31□□□□□ -1.08
NECAP1-221ENST00000639955 CREB1P16220 341 aa8.31□□□□□ -1.08
NECAP1-221ENST00000639955 PSMC4P43686 418 aa8.31□□□□□ -1.08
NECAP1-221ENST00000639955 STAT2P52630 851 aa8.31□□□□□ -1.08
NECAP1-221ENST00000639955 PHLDB3Q6NSJ2 640 aa8.31□□□□□ -1.08
NECAP1-221ENST00000639955 HIBCHQ6NVY1 386 aaPredicted RBP8.31□□□□□ -1.08
NECAP1-221ENST00000639955 KCNV1Q6PIU1 500 aa8.31□□□□□ -1.08
NECAP1-221ENST00000639955 FAM47EQ6ZV65 393 aa8.31□□□□□ -1.08
NECAP1-221ENST00000639955 DPH6Q7L8W6 267 aa8.31□□□□□ -1.08
NECAP1-221ENST00000639955 MIER3Q7Z3K6 550 aa8.31□□□□□ -1.08
NECAP1-221ENST00000639955 NT5DC3Q86UY8 548 aa8.31□□□□□ -1.08
NECAP1-221ENST00000639955 CACNA2D3Q8IZS8 1091 aa8.31□□□□□ -1.08
NECAP1-221ENST00000639955 KIF2BQ8N4N8 673 aa8.31□□□□□ -1.08
NECAP1-221ENST00000639955 IL31RAQ8NI17 732 aa8.31□□□□□ -1.08
NECAP1-221ENST00000639955 ETNPPLQ8TBG4 499 aa8.31□□□□□ -1.08
NECAP1-221ENST00000639955 CAVIN3Q969G5 261 aa8.31□□□□□ -1.08
NECAP1-221ENST00000639955 PRMT1Q99873 361 aaKnown RBP8.31□□□□□ -1.08
NECAP1-221ENST00000639955 SH3GL2Q99962 352 aa8.31□□□□□ -1.08
NECAP1-221ENST00000639955 DDX23Q9BUQ8 820 aaKnown RBP8.31□□□□□ -1.08
NECAP1-221ENST00000639955 MTFR1LQ9H019 292 aa8.31□□□□□ -1.08
NECAP1-221ENST00000639955 KCNMB3Q9NPA1 279 aa8.31□□□□□ -1.08
NECAP1-221ENST00000639955 AIPL1Q9NZN9 384 aa8.31□□□□□ -1.08
NECAP1-221ENST00000639955 TTC7AQ9ULT0 858 aaPredicted RBP8.31□□□□□ -1.08
NECAP1-221ENST00000639955 GAKO14976 1311 aa8.31□□□□□ -1.08
NECAP1-221ENST00000639955 ANKRD63C9JTQ0 380 aa8.31□□□□□ -1.08
NECAP1-221ENST00000639955 TOM1O60784 492 aa8.31□□□□□ -1.08
NECAP1-221ENST00000639955 SLITRK3O94933 977 aa8.31□□□□□ -1.08
NECAP1-221ENST00000639955 CHN1P15882 459 aa8.31□□□□□ -1.08
NECAP1-221ENST00000639955 FERP16591 822 aa8.31□□□□□ -1.08
NECAP1-221ENST00000639955 COMTP21964 271 aa8.31□□□□□ -1.08
NECAP1-221ENST00000639955 PPP2R2AP63151 447 aa8.31□□□□□ -1.08
NECAP1-221ENST00000639955 ZNF394Q53GI3 561 aa8.31□□□□□ -1.08
NECAP1-221ENST00000639955 DCAF12L1Q5VU92 463 aa8.31□□□□□ -1.08
NECAP1-221ENST00000639955 MICALCLQ6ZW33 695 aa8.31□□□□□ -1.08
NECAP1-221ENST00000639955 SLC47A2Q86VL8 602 aa8.31□□□□□ -1.08
NECAP1-221ENST00000639955 CCDC13Q8IYE1 715 aa8.31□□□□□ -1.08
NECAP1-221ENST00000639955 LMBR1Q8WVP7 490 aa8.31□□□□□ -1.08
NECAP1-221ENST00000639955 WDR11Q9BZH6 1224 aa8.31□□□□□ -1.08
NECAP1-221ENST00000639955 TMEM39BQ9GZU3 492 aa8.31□□□□□ -1.08
NECAP1-221ENST00000639955 ISCUQ9H1K1 167 aa8.31□□□□□ -1.08
NECAP1-221ENST00000639955 UNC45AQ9H3U1 944 aa8.31□□□□□ -1.08
NECAP1-221ENST00000639955 PRDM16Q9HAZ2 1276 aa8.31□□□□□ -1.08
NECAP1-221ENST00000639955 AGPAT3Q9NRZ7 376 aa8.31□□□□□ -1.08
NECAP1-221ENST00000639955 TMOD2Q9NZR1 351 aa8.31□□□□□ -1.08
NECAP1-221ENST00000639955 SCN7AQ01118 1682 aa8.31□□□□□ -1.08
NECAP1-221ENST00000639955 GMNCA6NCL1 334 aa8.31□□□□□ -1.08
NECAP1-221ENST00000639955 POLR2MP0CAP2 368 aa8.31□□□□□ -1.08
NECAP1-221ENST00000639955 PRLRP16471 622 aa8.31□□□□□ -1.08
NECAP1-221ENST00000639955 PPP3CAQ08209 521 aa8.31□□□□□ -1.08
NECAP1-221ENST00000639955 ITGB3BPQ13352 177 aaPredicted RBP8.31□□□□□ -1.08
NECAP1-221ENST00000639955 BIRC3Q13489 604 aa8.31□□□□□ -1.08
NECAP1-221ENST00000639955 SMAD1Q15797 465 aaKnown RBP8.31□□□□□ -1.08
NECAP1-221ENST00000639955 XKR9Q5GH70 373 aa8.31□□□□□ -1.08
NECAP1-221ENST00000639955 PADI6Q6TGC4 694 aa8.31□□□□□ -1.08
NECAP1-221ENST00000639955 JAMLQ86YT9 394 aa8.31□□□□□ -1.08
NECAP1-221ENST00000639955 CBWD2Q8IUF1 395 aa8.31□□□□□ -1.08
NECAP1-221ENST00000639955 TMBIM4Q9HC24 238 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms