RNA–Protein interactions for RNA: ENST00000639594.1

CROCCP2-206, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 2, humanhuman

TSL 1 (best)

Gene CROCCP2, Length 2,175 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP2-206ENST00000639594 PPP3CAQ08209 521 aa20.52■□□□□ 0.88
CROCCP2-206ENST00000639594 TRMT1LQ7Z2T5 733 aaKnown RBP20.52■□□□□ 0.88
CROCCP2-206ENST00000639594 TEPSINQ96N21 525 aa20.52■□□□□ 0.88
CROCCP2-206ENST00000639594 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.52■□□□□ 0.888e-17■■□□□ 14.5
CROCCP2-206ENST00000639594 KIAA1683Q9H0B3 1180 aa20.52■□□□□ 0.88
CROCCP2-206ENST00000639594 TAS2R14Q9NYV8 317 aa20.52■□□□□ 0.88
CROCCP2-206ENST00000639594 LTBP3Q9NS15 1303 aa20.52■□□□□ 0.88
CROCCP2-206ENST00000639594 GOLGA8KD6RF30 607 aa20.52■□□□□ 0.88
CROCCP2-206ENST00000639594 PGRMC1O00264 195 aaKnown RBP20.52■□□□□ 0.88
CROCCP2-206ENST00000639594 EGFRP00533 1210 aa20.52■□□□□ 0.88
CROCCP2-206ENST00000639594 TMEM253P0C7T8 217 aa20.52■□□□□ 0.88
CROCCP2-206ENST00000639594 MYCLP12524 364 aaPredicted RBP20.52■□□□□ 0.88
CROCCP2-206ENST00000639594 YWHABP31946 246 aaKnown RBP20.52■□□□□ 0.88
CROCCP2-206ENST00000639594 VAMP7P51809 220 aa20.52■□□□□ 0.88
CROCCP2-206ENST00000639594 RPS6P62753 249 aaKnown RBP20.52■□□□□ 0.88
CROCCP2-206ENST00000639594 PGM5Q15124 567 aa20.52■□□□□ 0.88
CROCCP2-206ENST00000639594 PROCA1Q8NCQ7 364 aaPredicted RBP20.52■□□□□ 0.88
CROCCP2-206ENST00000639594 ARL8AQ96BM9 186 aa20.52■□□□□ 0.88
CROCCP2-206ENST00000639594 HES6Q96HZ4 224 aa20.52■□□□□ 0.88
CROCCP2-206ENST00000639594 CCDC43Q96MW1 224 aaKnown RBP20.52■□□□□ 0.88
CROCCP2-206ENST00000639594 DOCK5Q9H7D0 1870 aa20.52■□□□□ 0.87
CROCCP2-206ENST00000639594 BUB1BO60566 1050 aaPredicted RBP20.51■□□□□ 0.87
CROCCP2-206ENST00000639594 ATP9AO75110 1047 aa20.51■□□□□ 0.87
CROCCP2-206ENST00000639594 LYPLA2O95372 231 aa20.51■□□□□ 0.87
CROCCP2-206ENST00000639594 ALCAMQ13740 583 aa20.51■□□□□ 0.87
CROCCP2-206ENST00000639594 KIF22Q14807 665 aa20.51■□□□□ 0.87
CROCCP2-206ENST00000639594 C1orf220Q5T0J3 134 aa20.51■□□□□ 0.87
CROCCP2-206ENST00000639594 FOXR1Q6PIV2 292 aa20.51■□□□□ 0.87
CROCCP2-206ENST00000639594 INTS8Q75QN2 995 aaKnown RBP20.51■□□□□ 0.87
CROCCP2-206ENST00000639594 PALB2Q86YC2 1186 aa20.51■□□□□ 0.87
CROCCP2-206ENST00000639594 ARHGEF19Q8IW93 802 aa20.51■□□□□ 0.87
CROCCP2-206ENST00000639594 RASGEF1CQ8N431 466 aa20.51■□□□□ 0.87
CROCCP2-206ENST00000639594 RFFLQ8WZ73 363 aa20.51■□□□□ 0.87
CROCCP2-206ENST00000639594 RUFY1Q96T51 708 aa20.51■□□□□ 0.87
CROCCP2-206ENST00000639594 GPRC5CQ9NQ84 441 aa20.51■□□□□ 0.87
CROCCP2-206ENST00000639594 TBC1D22BQ9NU19 505 aa20.51■□□□□ 0.87
CROCCP2-206ENST00000639594 AMFRQ9UKV5 643 aa20.51■□□□□ 0.87
CROCCP2-206ENST00000639594 ASTN2O75129 1339 aaPredicted RBP20.51■□□□□ 0.87
CROCCP2-206ENST00000639594 BACH1O14867 736 aa20.51■□□□□ 0.87
CROCCP2-206ENST00000639594 CCDC172P0C7W6 258 aa20.51■□□□□ 0.87
CROCCP2-206ENST00000639594 ERVK-9P63128 1117 aa20.51■□□□□ 0.87
CROCCP2-206ENST00000639594 PPATQ06203 517 aa20.51■□□□□ 0.87
CROCCP2-206ENST00000639594 TTMPQ5BVD1 217 aa20.51■□□□□ 0.87
CROCCP2-206ENST00000639594 HAUS6Q7Z4H7 955 aa20.51■□□□□ 0.87
CROCCP2-206ENST00000639594 PLEKHO2Q8TD55 490 aa20.51■□□□□ 0.87
CROCCP2-206ENST00000639594 ARHGEF26Q96DR7 871 aa20.51■□□□□ 0.87
CROCCP2-206ENST00000639594 FHDC1Q9C0D6 1143 aaPredicted RBP20.51■□□□□ 0.87
CROCCP2-206ENST00000639594 UBE2TQ9NPD8 197 aaPredicted RBP20.51■□□□□ 0.87
CROCCP2-206ENST00000639594 SEPT11Q9NVA2 429 aaKnown RBP20.51■□□□□ 0.87
CROCCP2-206ENST00000639594 CWC15Q9P013 229 aaKnown RBP20.51■□□□□ 0.87
CROCCP2-206ENST00000639594 GCLMP48507 274 aa20.5■□□□□ 0.87
CROCCP2-206ENST00000639594 GTF2BQ00403 316 aa20.5■□□□□ 0.87
CROCCP2-206ENST00000639594 TBC1D10BQ4KMP7 808 aaPredicted RBP20.5■□□□□ 0.87
CROCCP2-206ENST00000639594 C12orf56Q8IXR9 622 aa20.5■□□□□ 0.87
CROCCP2-206ENST00000639594 IQCKQ8N0W5 287 aa20.5■□□□□ 0.87
CROCCP2-206ENST00000639594 CTNNBL1Q8WYA6 563 aaPredicted RBP20.5■□□□□ 0.87
CROCCP2-206ENST00000639594 CALR3Q96L12 384 aaKnown RBP20.5■□□□□ 0.87
CROCCP2-206ENST00000639594 HSPBP1Q9NZL4 362 aa20.5■□□□□ 0.87
CROCCP2-206ENST00000639594 DAAM1Q9Y4D1 1078 aa20.5■□□□□ 0.87
CROCCP2-206ENST00000639594 SLC16A4O15374 487 aa20.49■□□□□ 0.87
CROCCP2-206ENST00000639594 ITGA4P13612 1032 aa20.49■□□□□ 0.87
CROCCP2-206ENST00000639594 PPFIA1Q13136 1202 aa20.49■□□□□ 0.87
CROCCP2-206ENST00000639594 FMNL3Q8IVF7 1028 aa20.49■□□□□ 0.87
CROCCP2-206ENST00000639594 MREGQ8N565 214 aa20.49■□□□□ 0.87
CROCCP2-206ENST00000639594 XXYLT1Q8NBI6 393 aa20.49■□□□□ 0.87
CROCCP2-206ENST00000639594 SLC20A1Q8WUM9 679 aa20.49■□□□□ 0.87
CROCCP2-206ENST00000639594 TMEM174Q8WUU8 243 aa20.49■□□□□ 0.87
CROCCP2-206ENST00000639594 PIK3R5Q8WYR1 880 aa20.49■□□□□ 0.87
CROCCP2-206ENST00000639594 AGPAT1Q99943 283 aa20.49■□□□□ 0.87
CROCCP2-206ENST00000639594 DDX47Q9H0S4 455 aaKnown RBP20.49■□□□□ 0.87
CROCCP2-206ENST00000639594 THAP2Q9H0W7 228 aa20.49■□□□□ 0.87
CROCCP2-206ENST00000639594 ISCUQ9H1K1 167 aa20.49■□□□□ 0.87
CROCCP2-206ENST00000639594 TAF1DQ9H5J8 278 aaPredicted RBP20.49■□□□□ 0.87
CROCCP2-206ENST00000639594 PPP1R9AQ9ULJ8 1098 aa20.49■□□□□ 0.87
CROCCP2-206ENST00000639594 ZNFX1Q9P2E3 1918 aaKnown RBP20.49■□□□□ 0.87
CROCCP2-206ENST00000639594 KRIT1O00522 736 aa20.49■□□□□ 0.87
CROCCP2-206ENST00000639594 SART1O43290 800 aaKnown RBP20.49■□□□□ 0.87
CROCCP2-206ENST00000639594 IVLP07476 585 aa20.49■□□□□ 0.87
CROCCP2-206ENST00000639594 VCAM1P19320 739 aa20.49■□□□□ 0.87
CROCCP2-206ENST00000639594 RFX1P22670 979 aa20.49■□□□□ 0.87
CROCCP2-206ENST00000639594 PEX3P56589 373 aa20.49■□□□□ 0.87
CROCCP2-206ENST00000639594 EPC2Q52LR7 807 aa20.49■□□□□ 0.87
CROCCP2-206ENST00000639594 CFAP58Q5T655 872 aa20.49■□□□□ 0.87
CROCCP2-206ENST00000639594 PLA2G4FQ68DD2 849 aa20.49■□□□□ 0.87
CROCCP2-206ENST00000639594 WHAMMQ8TF30 809 aa20.49■□□□□ 0.87
CROCCP2-206ENST00000639594 MAP3K20Q9NYL2 800 aaKnown RBP20.49■□□□□ 0.87
CROCCP2-206ENST00000639594 FZD9O00144 591 aa20.48■□□□□ 0.87
CROCCP2-206ENST00000639594 CCNE2O96020 404 aa20.48■□□□□ 0.87
CROCCP2-206ENST00000639594 MTMR2Q13614 643 aa20.48■□□□□ 0.87
CROCCP2-206ENST00000639594 C4orf19Q8IY42 314 aa20.48■□□□□ 0.87
CROCCP2-206ENST00000639594 TRERF1Q96PN7 1200 aa20.48■□□□□ 0.87
CROCCP2-206ENST00000639594 RMDN3Q96TC7 470 aa20.48■□□□□ 0.87
CROCCP2-206ENST00000639594 ARID2Q68CP9 1835 aa20.48■□□□□ 0.87
CROCCP2-206ENST00000639594 SBF1O95248 1867 aa20.48■□□□□ 0.87
CROCCP2-206ENST00000639594 ZNF541Q9H0D2 1346 aa20.48■□□□□ 0.87
CROCCP2-206ENST00000639594 BHMG1C9JSJ3 638 aaPredicted RBP20.48■□□□□ 0.87
CROCCP2-206ENST00000639594 DDX3YO15523 660 aaKnown RBP20.48■□□□□ 0.87
CROCCP2-206ENST00000639594 SHOX2O60902 331 aaPredicted RBP20.48■□□□□ 0.87
CROCCP2-206ENST00000639594 KCTD19Q17RG1 926 aaPredicted RBP20.48■□□□□ 0.87
CROCCP2-206ENST00000639594 DDX42Q86XP3 938 aaKnown RBP eCLIP20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms