RNA–Protein interactions for RNA: ENST00000638794.1

SMN2-216, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 846 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-216ENST00000638794 ZC3H11AO75152 810 aaKnown RBP eCLIP18.87■□□□□ 0.61
SMN2-216ENST00000638794 SKIP12755 728 aa18.87■□□□□ 0.61
SMN2-216ENST00000638794 POLGP54098 1239 aaPredicted RBP18.87■□□□□ 0.61
SMN2-216ENST00000638794 GLB1LQ6UWU2 654 aa18.87■□□□□ 0.61
SMN2-216ENST00000638794 MRPL43Q8N983 215 aaKnown RBP18.87■□□□□ 0.61
SMN2-216ENST00000638794 RSPH1Q8WYR4 309 aa18.87■□□□□ 0.61
SMN2-216ENST00000638794 TMEM169Q96HH4 297 aa18.87■□□□□ 0.61
SMN2-216ENST00000638794 DHX33Q9H6R0 707 aaKnown RBP18.87■□□□□ 0.61
SMN2-216ENST00000638794 BMP2KQ9NSY1 1161 aaPredicted RBP18.87■□□□□ 0.61
SMN2-216ENST00000638794 AGPAT5Q9NUQ2 364 aa18.87■□□□□ 0.61
SMN2-216ENST00000638794 TBC1D13Q9NVG8 400 aa18.87■□□□□ 0.61
SMN2-216ENST00000638794 ORC3Q9UBD5 711 aaPredicted RBP18.87■□□□□ 0.61
SMN2-216ENST00000638794 ZNF623O75123 536 aa18.86■□□□□ 0.61
SMN2-216ENST00000638794 YWHABP31946 246 aaKnown RBP18.86■□□□□ 0.61
SMN2-216ENST00000638794 RAB27AP51159 221 aa18.86■□□□□ 0.61
SMN2-216ENST00000638794 AK2P54819 239 aa18.86■□□□□ 0.61
SMN2-216ENST00000638794 ANAPC15P60006 121 aa18.86■□□□□ 0.61
SMN2-216ENST00000638794 EPHA7Q15375 998 aa18.86■□□□□ 0.61
SMN2-216ENST00000638794 NCAPH2Q6IBW4 605 aa18.86■□□□□ 0.61
SMN2-216ENST00000638794 C4orf19Q8IY42 314 aa18.86■□□□□ 0.61
SMN2-216ENST00000638794 PRPF31Q8WWY3 499 aaKnown RBP18.86■□□□□ 0.61
SMN2-216ENST00000638794 CASP10Q92851 521 aa18.86■□□□□ 0.61
SMN2-216ENST00000638794 TMEM143Q96AN5 459 aa18.86■□□□□ 0.61
SMN2-216ENST00000638794 NAP1L4Q99733 375 aaKnown RBP18.86■□□□□ 0.61
SMN2-216ENST00000638794 RGL1Q9NZL6 768 aa18.86■□□□□ 0.61
SMN2-216ENST00000638794 CDH22Q9UJ99 828 aa18.86■□□□□ 0.61
SMN2-216ENST00000638794 INPP5FQ9Y2H2 1132 aa18.86■□□□□ 0.61
SMN2-216ENST00000638794 PPME1Q9Y570 386 aa18.86■□□□□ 0.61
SMN2-216ENST00000638794 HCFC2Q9Y5Z7 792 aa18.86■□□□□ 0.61
SMN2-216ENST00000638794 MARCH6O60337 910 aa18.85■□□□□ 0.61
SMN2-216ENST00000638794 OFD1O75665 1012 aa18.85■□□□□ 0.61
SMN2-216ENST00000638794 SRGAP2CP0DJJ0 459 aa18.85■□□□□ 0.61
SMN2-216ENST00000638794 FDPSP14324 419 aaKnown RBP18.85■□□□□ 0.61
SMN2-216ENST00000638794 HOXB8P17481 243 aaPredicted RBP18.85■□□□□ 0.61
SMN2-216ENST00000638794 CA8P35219 290 aa18.85■□□□□ 0.61
SMN2-216ENST00000638794 RFC5P40937 340 aa18.85■□□□□ 0.61
SMN2-216ENST00000638794 ZXDAP98168 799 aa18.85■□□□□ 0.61
SMN2-216ENST00000638794 SPIRE1Q08AE8 756 aa18.85■□□□□ 0.61
SMN2-216ENST00000638794 NR5A1Q13285 461 aa18.85■□□□□ 0.61
SMN2-216ENST00000638794 ANKRD1Q15327 319 aa18.85■□□□□ 0.61
SMN2-216ENST00000638794 NOMO2Q5JPE7 1267 aa18.85■□□□□ 0.61
SMN2-216ENST00000638794 TRIM67Q6ZTA4 783 aa18.85■□□□□ 0.61
SMN2-216ENST00000638794 EXOC8Q8IYI6 725 aa18.85■□□□□ 0.61
SMN2-216ENST00000638794 VPS52Q8N1B4 723 aa18.85■□□□□ 0.61
SMN2-216ENST00000638794 NECAB1Q8N987 351 aa18.85■□□□□ 0.61
SMN2-216ENST00000638794 PSPC1Q8WXF1 523 aaKnown RBP18.85■□□□□ 0.61
SMN2-216ENST00000638794 DYDC2Q96IM9 177 aa18.85■□□□□ 0.61
SMN2-216ENST00000638794 MFSD14AQ96MC6 490 aa18.85■□□□□ 0.61
SMN2-216ENST00000638794 FBXL18Q96ME1 805 aa18.85■□□□□ 0.61
SMN2-216ENST00000638794 ZBP1Q9H171 429 aa18.85■□□□□ 0.61
SMN2-216ENST00000638794 NRDE2Q9H7Z3 1164 aa18.85■□□□□ 0.61
SMN2-216ENST00000638794 MINDY3Q9H8M7 445 aa18.85■□□□□ 0.61
SMN2-216ENST00000638794 PCDHB2Q9Y5E7 798 aa18.85■□□□□ 0.61
SMN2-216ENST00000638794 TMEM221A6NGB7 291 aa18.84■□□□□ 0.61
SMN2-216ENST00000638794 M0R296 226 aa18.84■□□□□ 0.61
SMN2-216ENST00000638794 ZBTB39O15060 712 aa18.84■□□□□ 0.61
SMN2-216ENST00000638794 CLASP2O75122 1294 aaKnown RBP18.84■□□□□ 0.61
SMN2-216ENST00000638794 CXCL14O95715 111 aa18.84■□□□□ 0.61
SMN2-216ENST00000638794 NEFLP07196 543 aa18.84■□□□□ 0.61
SMN2-216ENST00000638794 KRT2P35908 639 aa18.84■□□□□ 0.61
SMN2-216ENST00000638794 CYP4A11Q02928 519 aa18.84■□□□□ 0.61
SMN2-216ENST00000638794 LAMTOR4Q0VGL1 99 aa18.84■□□□□ 0.61
SMN2-216ENST00000638794 CTTNQ14247 550 aaKnown RBP18.84■□□□□ 0.61
SMN2-216ENST00000638794 EMC2Q15006 297 aa18.84■□□□□ 0.61
SMN2-216ENST00000638794 SLFN12Q8IYM2 578 aa18.84■□□□□ 0.61
SMN2-216ENST00000638794 BCL7CQ8WUZ0 217 aaPredicted RBP18.84■□□□□ 0.61
SMN2-216ENST00000638794 AUTS2Q8WXX7 1259 aa18.84■□□□□ 0.61
SMN2-216ENST00000638794 WASF1Q92558 559 aa18.84■□□□□ 0.61
SMN2-216ENST00000638794 TNFRSF25Q93038 417 aa18.84■□□□□ 0.61
SMN2-216ENST00000638794 IGSF21Q96ID5 467 aa18.84■□□□□ 0.61
SMN2-216ENST00000638794 KCNH6Q9H252 994 aa18.84■□□□□ 0.61
SMN2-216ENST00000638794 DNAJB4Q9UDY4 337 aa18.84■□□□□ 0.61
SMN2-216ENST00000638794 ZDBF2Q9HCK1 2354 aa18.83■□□□□ 0.61
SMN2-216ENST00000638794 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.83■□□□□ 0.6
SMN2-216ENST00000638794 B4GALT3O60512 393 aa18.83■□□□□ 0.6
SMN2-216ENST00000638794 LARGE1O95461 756 aa18.83■□□□□ 0.6
SMN2-216ENST00000638794 GALTP07902 379 aa18.83■□□□□ 0.6
SMN2-216ENST00000638794 SP100P23497 879 aaPredicted RBP18.83■□□□□ 0.6
SMN2-216ENST00000638794 RNASELQ05823 741 aaKnown RBP18.83■□□□□ 0.6
SMN2-216ENST00000638794 BMS1Q14692 1282 aaKnown RBP18.83■□□□□ 0.6
SMN2-216ENST00000638794 ME3Q16798 604 aa18.83■□□□□ 0.6
SMN2-216ENST00000638794 AGMOQ6ZNB7 445 aa18.83■□□□□ 0.6
SMN2-216ENST00000638794 OTUD6AQ7L8S5 288 aa18.83■□□□□ 0.6
SMN2-216ENST00000638794 BMP8AQ7Z5Y6 402 aa18.83■□□□□ 0.6
SMN2-216ENST00000638794 SRGAP1Q7Z6B7 1085 aa18.83■□□□□ 0.6
SMN2-216ENST00000638794 GTF3C6Q969F1 213 aa18.83■□□□□ 0.6
SMN2-216ENST00000638794 PGBD4Q96DM1 585 aa18.83■□□□□ 0.6
SMN2-216ENST00000638794 GBP3Q9H0R5 595 aa18.83■□□□□ 0.6
SMN2-216ENST00000638794 ZSWIM4Q9H7M6 989 aa18.83■□□□□ 0.6
SMN2-216ENST00000638794 CARNS1A5YM72 827 aa18.82■□□□□ 0.6
SMN2-216ENST00000638794 GAS2O43903 313 aaKnown RBP18.82■□□□□ 0.6
SMN2-216ENST00000638794 BAG4O95429 457 aaKnown RBP18.82■□□□□ 0.6
SMN2-216ENST00000638794 CTSAP10619 480 aa18.82■□□□□ 0.6
SMN2-216ENST00000638794 HOXA11P31270 313 aaPredicted RBP18.82■□□□□ 0.6
SMN2-216ENST00000638794 SLC11A1P49279 550 aa18.82■□□□□ 0.6
SMN2-216ENST00000638794 TPRNQ4KMQ1 711 aa18.82■□□□□ 0.6
SMN2-216ENST00000638794 XKR9Q5GH70 373 aa18.82■□□□□ 0.6
SMN2-216ENST00000638794 DDX53Q86TM3 631 aaKnown RBP18.82■□□□□ 0.6
SMN2-216ENST00000638794 FERMT3Q86UX7 667 aa18.82■□□□□ 0.6
SMN2-216ENST00000638794 ZNF280BQ86YH2 543 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms