RNA–Protein interactions for RNA: ENST00000638114.1

CACNA1A-259, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 3

Gene CACNA1A, Length 517 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-259ENST00000638114 HYAL1Q12794 435 aa18.64■□□□□ 0.57
CACNA1A-259ENST00000638114 TFDP1Q14186 410 aa18.64■□□□□ 0.57
CACNA1A-259ENST00000638114 LEXMQ3ZCV2 418 aa18.64■□□□□ 0.57
CACNA1A-259ENST00000638114 LONRF3Q496Y0 759 aa18.64■□□□□ 0.57
CACNA1A-259ENST00000638114 POTEGQ6S5H5 508 aa18.64■□□□□ 0.57
CACNA1A-259ENST00000638114 LPPQ93052 612 aa18.64■□□□□ 0.57
CACNA1A-259ENST00000638114 PPP2R3CQ969Q6 453 aa18.64■□□□□ 0.57
CACNA1A-259ENST00000638114 POLR3CQ9BUI4 534 aaPredicted RBP18.64■□□□□ 0.57
CACNA1A-259ENST00000638114 IGFLR1Q9H665 355 aa18.64■□□□□ 0.57
CACNA1A-259ENST00000638114 FAM105AQ9NUU6 356 aa18.64■□□□□ 0.57
CACNA1A-259ENST00000638114 H3BQV1 296 aa18.63■□□□□ 0.57
CACNA1A-259ENST00000638114 NCK2O43639 380 aa18.63■□□□□ 0.57
CACNA1A-259ENST00000638114 ERLIN2O94905 339 aa18.63■□□□□ 0.57
CACNA1A-259ENST00000638114 TOB1P50616 345 aaPredicted RBP18.63■□□□□ 0.57
CACNA1A-259ENST00000638114 UBE3AQ05086 875 aa18.63■□□□□ 0.57
CACNA1A-259ENST00000638114 COL19A1Q14993 1142 aa18.63■□□□□ 0.57
CACNA1A-259ENST00000638114 HAUS3Q68CZ6 603 aa18.63■□□□□ 0.57
CACNA1A-259ENST00000638114 C4orf32Q8N8J7 132 aa18.63■□□□□ 0.57
CACNA1A-259ENST00000638114 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.63■□□□□ 0.57
CACNA1A-259ENST00000638114 ASAP3Q8TDY4 903 aa18.63■□□□□ 0.57
CACNA1A-259ENST00000638114 MICAL1Q8TDZ2 1067 aa18.63■□□□□ 0.57
CACNA1A-259ENST00000638114 ZNF558Q96NG5 402 aa18.63■□□□□ 0.57
CACNA1A-259ENST00000638114 NACC1Q96RE7 527 aa18.63■□□□□ 0.57
CACNA1A-259ENST00000638114 MRPL9Q9BYD2 267 aaKnown RBP18.63■□□□□ 0.57
CACNA1A-259ENST00000638114 POLR3FQ9H1D9 316 aaPredicted RBP18.63■□□□□ 0.57
CACNA1A-259ENST00000638114 PCDHB6Q9Y5E3 794 aa18.63■□□□□ 0.57
CACNA1A-259ENST00000638114 BDP1A6H8Y1 2624 aa18.63■□□□□ 0.57
CACNA1A-259ENST00000638114 INO80B-WBP1J3KQ70 363 aa18.62■□□□□ 0.57
CACNA1A-259ENST00000638114 RPA1P27694 616 aa18.62■□□□□ 0.57
CACNA1A-259ENST00000638114 GTF2F1P35269 517 aaKnown RBP eCLIP18.62■□□□□ 0.57
CACNA1A-259ENST00000638114 ARL2P36404 184 aa18.62■□□□□ 0.57
CACNA1A-259ENST00000638114 PBX3P40426 434 aa18.62■□□□□ 0.57
CACNA1A-259ENST00000638114 FXR2P51116 673 aaKnown RBP eCLIP18.62■□□□□ 0.57
CACNA1A-259ENST00000638114 PTENP60484 403 aa18.62■□□□□ 0.57
CACNA1A-259ENST00000638114 PTGDRQ13258 359 aa18.62■□□□□ 0.57
CACNA1A-259ENST00000638114 CAPSQ13938 189 aa18.62■□□□□ 0.57
CACNA1A-259ENST00000638114 KCNT2Q6UVM3 1135 aa18.62■□□□□ 0.57
CACNA1A-259ENST00000638114 MAEAQ7L5Y9 396 aa18.62■□□□□ 0.57
CACNA1A-259ENST00000638114 ADGRD2Q7Z7M1 963 aa18.62■□□□□ 0.57
CACNA1A-259ENST00000638114 TLR9Q9NR96 1032 aa18.62■□□□□ 0.57
CACNA1A-259ENST00000638114 DBR1Q9UK59 544 aaKnown RBP18.62■□□□□ 0.57
CACNA1A-259ENST00000638114 SMC3Q9UQE7 1217 aa18.62■□□□□ 0.57
CACNA1A-259ENST00000638114 PCDHB2Q9Y5E7 798 aa18.62■□□□□ 0.57
CACNA1A-259ENST00000638114 PCDHGC5Q9Y5F6 944 aa18.62■□□□□ 0.57
CACNA1A-259ENST00000638114 ZNF623O75123 536 aa18.61■□□□□ 0.57
CACNA1A-259ENST00000638114 GLRA2P23416 452 aa18.61■□□□□ 0.57
CACNA1A-259ENST00000638114 HOXA11P31270 313 aaPredicted RBP18.61■□□□□ 0.57
CACNA1A-259ENST00000638114 PPM1AP35813 382 aa18.61■□□□□ 0.57
CACNA1A-259ENST00000638114 CCT6AP40227 531 aaKnown RBP18.61■□□□□ 0.57
CACNA1A-259ENST00000638114 PTCRAQ6ISU1 281 aaPredicted RBP18.61■□□□□ 0.57
CACNA1A-259ENST00000638114 GLB1LQ6UWU2 654 aa18.61■□□□□ 0.57
CACNA1A-259ENST00000638114 PGBD4Q96DM1 585 aa18.61■□□□□ 0.57
CACNA1A-259ENST00000638114 GPRC5CQ9NQ84 441 aa18.61■□□□□ 0.57
CACNA1A-259ENST00000638114 LRWD1Q9UFC0 647 aa18.61■□□□□ 0.57
CACNA1A-259ENST00000638114 INPP5FQ9Y2H2 1132 aa18.61■□□□□ 0.57
CACNA1A-259ENST00000638114 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.61■□□□□ 0.57
CACNA1A-259ENST00000638114 ARHGEF35A5YM69 484 aa18.6■□□□□ 0.57
CACNA1A-259ENST00000638114 MEIS3P2A8K0S8 358 aa18.6■□□□□ 0.57
CACNA1A-259ENST00000638114 LINC01565O15544 149 aa18.6■□□□□ 0.57
CACNA1A-259ENST00000638114 TSPAN1O60635 241 aa18.6■□□□□ 0.57
CACNA1A-259ENST00000638114 NRIP1P48552 1158 aa18.6■□□□□ 0.57
CACNA1A-259ENST00000638114 PLCB3Q01970 1234 aa18.6■□□□□ 0.57
CACNA1A-259ENST00000638114 POU5F1BQ06416 359 aa18.6■□□□□ 0.57
CACNA1A-259ENST00000638114 NCBP1Q09161 790 aaKnown RBP18.6■□□□□ 0.57
CACNA1A-259ENST00000638114 PCBP1Q15365 356 aaKnown RBP eCLIP18.6■□□□□ 0.57
CACNA1A-259ENST00000638114 CTC1Q2NKJ3 1217 aa18.6■□□□□ 0.57
CACNA1A-259ENST00000638114 RBM23Q86U06 439 aaKnown RBP18.6■□□□□ 0.57
CACNA1A-259ENST00000638114 IFNLR1Q8IU57 520 aaPredicted RBP18.6■□□□□ 0.57
CACNA1A-259ENST00000638114 MCPH1Q8NEM0 835 aa18.6■□□□□ 0.57
CACNA1A-259ENST00000638114 RSPH1Q8WYR4 309 aa18.6■□□□□ 0.57
CACNA1A-259ENST00000638114 MRPS27Q92552 414 aaKnown RBP18.6■□□□□ 0.57
CACNA1A-259ENST00000638114 RAB34Q9BZG1 259 aa18.6■□□□□ 0.57
CACNA1A-259ENST00000638114 SPG21Q9NZD8 308 aa18.6■□□□□ 0.57
CACNA1A-259ENST00000638114 PUF60Q9UHX1 559 aaKnown RBP18.6■□□□□ 0.57
CACNA1A-259ENST00000638114 LRRIQ4A6NIV6 560 aa18.59■□□□□ 0.57
CACNA1A-259ENST00000638114 LAD1O00515 517 aa18.59■□□□□ 0.57
CACNA1A-259ENST00000638114 ZC3H11AO75152 810 aaKnown RBP eCLIP18.59■□□□□ 0.57
CACNA1A-259ENST00000638114 IL9P15248 144 aa18.59■□□□□ 0.57
CACNA1A-259ENST00000638114 MUTP22033 750 aa18.59■□□□□ 0.57
CACNA1A-259ENST00000638114 AXLP30530 894 aa18.59■□□□□ 0.57
CACNA1A-259ENST00000638114 LTBRP36941 435 aa18.59■□□□□ 0.57
CACNA1A-259ENST00000638114 ERVFC1P60507 584 aa18.59■□□□□ 0.57
CACNA1A-259ENST00000638114 KRT17Q04695 432 aa18.59■□□□□ 0.57
CACNA1A-259ENST00000638114 RNASELQ05823 741 aaKnown RBP18.59■□□□□ 0.57
CACNA1A-259ENST00000638114 MBTD1Q05BQ5 628 aa18.59■□□□□ 0.57
CACNA1A-259ENST00000638114 PUS10Q3MIT2 529 aaKnown RBP18.59■□□□□ 0.57
CACNA1A-259ENST00000638114 RILPL1Q5EBL4 403 aa18.59■□□□□ 0.57
CACNA1A-259ENST00000638114 NOMO2Q5JPE7 1267 aa18.59■□□□□ 0.57
CACNA1A-259ENST00000638114 UBXN11Q5T124 520 aa18.59■□□□□ 0.57
CACNA1A-259ENST00000638114 NOTUMQ6P988 496 aa18.59■□□□□ 0.57
CACNA1A-259ENST00000638114 PADI6Q6TGC4 694 aa18.59■□□□□ 0.57
CACNA1A-259ENST00000638114 SNX29Q8TEQ0 813 aa18.59■□□□□ 0.57
CACNA1A-259ENST00000638114 CPB2Q96IY4 423 aa18.59■□□□□ 0.57
CACNA1A-259ENST00000638114 ENTPD7Q9NQZ7 604 aa18.59■□□□□ 0.57
CACNA1A-259ENST00000638114 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.59■□□□□ 0.57
CACNA1A-259ENST00000638114 LZTS1Q9Y250 596 aa18.59■□□□□ 0.57
CACNA1A-259ENST00000638114 GRXCR2A6NFK2 248 aa18.58■□□□□ 0.56
CACNA1A-259ENST00000638114 TBX10O75333 385 aa18.58■□□□□ 0.56
CACNA1A-259ENST00000638114 OFD1O75665 1012 aa18.58■□□□□ 0.56
CACNA1A-259ENST00000638114 ALDH7A1P49419 539 aaKnown RBP18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms