RNA–Protein interactions for RNA: ENST00000637966.1

CACNA1A-255, Transcript of calcium voltage-gated channel subunit alpha1 A, human

TSL 5

Gene CACNA1A, Length 1,887 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1A-255	ENST00000637966	PPFIA1	Q13136	1202 aa		13.53	□□□□□ -0.24
CACNA1A-255	ENST00000637966	MXD4	Q14582	209 aa	Predicted RBP	13.53	□□□□□ -0.24
CACNA1A-255	ENST00000637966	E4F1	Q66K89	784 aa	Predicted RBP	13.53	□□□□□ -0.24
CACNA1A-255	ENST00000637966	ADGRA3	Q8IWK6	1321 aa		13.53	□□□□□ -0.24
CACNA1A-255	ENST00000637966	CCAR2	Q8N163	923 aa	Known RBP	13.53	□□□□□ -0.24
CACNA1A-255	ENST00000637966	METTL13	Q8N6R0	699 aa		13.53	□□□□□ -0.24
CACNA1A-255	ENST00000637966	RETREG2	Q8NC44	543 aa		13.53	□□□□□ -0.24
CACNA1A-255	ENST00000637966	RAET1E	Q8TD07	263 aa		13.53	□□□□□ -0.24
CACNA1A-255	ENST00000637966	PXYLP1	Q8TE99	480 aa		13.53	□□□□□ -0.24
CACNA1A-255	ENST00000637966	PSPC1	Q8WXF1	523 aa	Known RBP	13.53	□□□□□ -0.24
CACNA1A-255	ENST00000637966	KCNN1	Q92952	543 aa		13.53	□□□□□ -0.24
CACNA1A-255	ENST00000637966	AGPAT3	Q9NRZ7	376 aa		13.53	□□□□□ -0.24
CACNA1A-255	ENST00000637966	CGN	Q9P2M7	1197 aa	Known RBP	13.53	□□□□□ -0.24
CACNA1A-255	ENST00000637966	SUCLA2	Q9P2R7	463 aa	Predicted RBP	13.53	□□□□□ -0.24
CACNA1A-255	ENST00000637966	KAT6A	Q92794	2004 aa		13.52	□□□□□ -0.24
CACNA1A-255	ENST00000637966	EVPL	Q92817	2033 aa		13.52	□□□□□ -0.24
CACNA1A-255	ENST00000637966	RRN3P2	A6NIE6	340 aa		13.52	□□□□□ -0.25
CACNA1A-255	ENST00000637966	LRRIQ4	A6NIV6	560 aa		13.52	□□□□□ -0.25
CACNA1A-255	ENST00000637966	HMGCR	P04035	888 aa		13.52	□□□□□ -0.25
CACNA1A-255	ENST00000637966	TPM2	P07951	284 aa		13.52	□□□□□ -0.25
CACNA1A-255	ENST00000637966	PRKAR2A	P13861	404 aa	Known RBP	13.52	□□□□□ -0.25
CACNA1A-255	ENST00000637966	CCND3	P30281	292 aa	Predicted RBP	13.52	□□□□□ -0.25
CACNA1A-255	ENST00000637966	MARS	P56192	900 aa	Known RBP	13.52	□□□□□ -0.25
CACNA1A-255	ENST00000637966	MAP2K1	Q02750	393 aa	Predicted RBP	13.52	□□□□□ -0.25
CACNA1A-255	ENST00000637966	LAMTOR4	Q0VGL1	99 aa		13.52	□□□□□ -0.25
CACNA1A-255	ENST00000637966	GRIK4	Q16099	956 aa		13.52	□□□□□ -0.25
CACNA1A-255	ENST00000637966	KIAA0753	Q2KHM9	967 aa		13.52	□□□□□ -0.25
CACNA1A-255	ENST00000637966	CCDC40	Q4G0X9	1142 aa		13.52	□□□□□ -0.25
CACNA1A-255	ENST00000637966	MAP4K3	Q8IVH8	894 aa		13.52	□□□□□ -0.25
CACNA1A-255	ENST00000637966	DEPTOR	Q8TB45	409 aa		13.52	□□□□□ -0.25
CACNA1A-255	ENST00000637966	NOC4L	Q9BVI4	516 aa	Known RBP	13.52	□□□□□ -0.25
CACNA1A-255	ENST00000637966	UPF3A	Q9H1J1	476 aa	Known RBP	13.52	□□□□□ -0.25
CACNA1A-255	ENST00000637966	DMAC2	Q9NW81	257 aa		13.52	□□□□□ -0.25
CACNA1A-255	ENST00000637966	HAS3	O00219	553 aa		13.51	□□□□□ -0.25
CACNA1A-255	ENST00000637966	ASAP2	O43150	1006 aa		13.51	□□□□□ -0.25
CACNA1A-255	ENST00000637966	KPNA6	O60684	536 aa		13.51	□□□□□ -0.25
CACNA1A-255	ENST00000637966	C6orf222	P0C671	652 aa	Predicted RBP	13.51	□□□□□ -0.25
CACNA1A-255	ENST00000637966	RARB	P10826	455 aa		13.51	□□□□□ -0.25
CACNA1A-255	ENST00000637966	HSPA6	P17066	643 aa		13.51	□□□□□ -0.25
CACNA1A-255	ENST00000637966	PSEN2	P49810	448 aa		13.51	□□□□□ -0.25
CACNA1A-255	ENST00000637966	NKX3-2	P78367	333 aa		13.51	□□□□□ -0.25
CACNA1A-255	ENST00000637966	CAPS	Q13938	189 aa		13.51	□□□□□ -0.25
CACNA1A-255	ENST00000637966	MYBPC2	Q14324	1141 aa		13.51	□□□□□ -0.25
CACNA1A-255	ENST00000637966	MFSD10	Q14728	455 aa		13.51	□□□□□ -0.25
CACNA1A-255	ENST00000637966	MIIP	Q5JXC2	388 aa		13.51	□□□□□ -0.25
CACNA1A-255	ENST00000637966	MARCH8	Q5T0T0	291 aa		13.51	□□□□□ -0.25
CACNA1A-255	ENST00000637966	MAP3K21	Q5TCX8	1036 aa		13.51	□□□□□ -0.25
CACNA1A-255	ENST00000637966	MTHFD1L	Q6UB35	978 aa		13.51	□□□□□ -0.25
CACNA1A-255	ENST00000637966	NYAP1	Q6ZVC0	841 aa		13.51	□□□□□ -0.25
CACNA1A-255	ENST00000637966	TAS1R3	Q7RTX0	852 aa		13.51	□□□□□ -0.25
CACNA1A-255	ENST00000637966	SLC9A9	Q8IVB4	645 aa		13.51	□□□□□ -0.25
CACNA1A-255	ENST00000637966	LINC01465	Q8N7H1	131 aa		13.51	□□□□□ -0.25
CACNA1A-255	ENST00000637966	TMEM174	Q8WUU8	243 aa		13.51	□□□□□ -0.25
CACNA1A-255	ENST00000637966	ZBTB10	Q96DT7	871 aa		13.51	□□□□□ -0.25
CACNA1A-255	ENST00000637966	BEGAIN	Q9BUH8	593 aa		13.51	□□□□□ -0.25
CACNA1A-255	ENST00000637966	SPC25	Q9HBM1	224 aa		13.51	□□□□□ -0.25
CACNA1A-255	ENST00000637966	LGALS16	A8MUM7	142 aa		13.5	□□□□□ -0.25
CACNA1A-255	ENST00000637966		K7ERI5	159 aa		13.5	□□□□□ -0.25
CACNA1A-255	ENST00000637966	AKAP3	O75969	853 aa		13.5	□□□□□ -0.25
CACNA1A-255	ENST00000637966	SRGAP2C	P0DJJ0	459 aa		13.5	□□□□□ -0.25
CACNA1A-255	ENST00000637966	CLCN3	P51790	818 aa		13.5	□□□□□ -0.25
CACNA1A-255	ENST00000637966	PRMT2	P55345	433 aa		13.5	□□□□□ -0.25
CACNA1A-255	ENST00000637966	CHMP4BP1	P59074	171 aa		13.5	□□□□□ -0.25
CACNA1A-255	ENST00000637966	PURA	Q00577	322 aa	Known RBP	13.5	□□□□□ -0.25
CACNA1A-255	ENST00000637966	UBXN1	Q04323	297 aa		13.5	□□□□□ -0.25
CACNA1A-255	ENST00000637966	MAN2A1	Q16706	1144 aa		13.5	□□□□□ -0.25
CACNA1A-255	ENST00000637966	GNAS	Q5JWF2	1037 aa		13.5	□□□□□ -0.25
CACNA1A-255	ENST00000637966	DNTTIP2	Q5QJE6	756 aa	Known RBP	13.5	□□□□□ -0.25
CACNA1A-255	ENST00000637966	CEP135	Q66GS9	1140 aa		13.5	□□□□□ -0.25
CACNA1A-255	ENST00000637966	FRMD5	Q7Z6J6	570 aa		13.5	□□□□□ -0.25
CACNA1A-255	ENST00000637966	C12orf56	Q8IXR9	622 aa		13.5	□□□□□ -0.25
CACNA1A-255	ENST00000637966	CCDC112	Q8NEF3	446 aa		13.5	□□□□□ -0.25
CACNA1A-255	ENST00000637966	C16orf45	Q96MC5	204 aa	Predicted RBP	13.5	□□□□□ -0.25
CACNA1A-255	ENST00000637966	TMEM134	Q9H6X4	195 aa		13.5	□□□□□ -0.25
CACNA1A-255	ENST00000637966	SETD4	Q9NVD3	440 aa		13.5	□□□□□ -0.25
CACNA1A-255	ENST00000637966	ITIH6	Q6UXX5	1313 aa		13.5	□□□□□ -0.25
CACNA1A-255	ENST00000637966	NRCAM	Q92823	1304 aa		13.5	□□□□□ -0.25
CACNA1A-255	ENST00000637966	MYADML2	A6NDP7	307 aa		13.5	□□□□□ -0.25
CACNA1A-255	ENST00000637966	TISP43	B9A030	160 aa		13.5	□□□□□ -0.25
CACNA1A-255	ENST00000637966	ANKRD63	C9JTQ0	380 aa		13.5	□□□□□ -0.25
CACNA1A-255	ENST00000637966	SLC16A3	O15427	465 aa	Known RBP	13.5	□□□□□ -0.25
CACNA1A-255	ENST00000637966	PGK1	P00558	417 aa		13.5	□□□□□ -0.25
CACNA1A-255	ENST00000637966	SMIM10L2A	P0DMW4	78 aa		13.5	□□□□□ -0.25
CACNA1A-255	ENST00000637966	SMIM10L2B	P0DMW5	78 aa		13.5	□□□□□ -0.25
CACNA1A-255	ENST00000637966	TMOD1	P28289	359 aa		13.5	□□□□□ -0.25
CACNA1A-255	ENST00000637966	CASP4	P49662	377 aa		13.5	□□□□□ -0.25
CACNA1A-255	ENST00000637966	CYP2J2	P51589	502 aa		13.5	□□□□□ -0.25
CACNA1A-255	ENST00000637966	STRN3	Q13033	797 aa		13.5	□□□□□ -0.25
CACNA1A-255	ENST00000637966	VWA3B	Q502W6	1294 aa		13.5	□□□□□ -0.25
CACNA1A-255	ENST00000637966	RHPN2	Q8IUC4	686 aa		13.5	□□□□□ -0.25
CACNA1A-255	ENST00000637966	TRIM59	Q8IWR1	403 aa		13.5	□□□□□ -0.25
CACNA1A-255	ENST00000637966	METTL14	Q9HCE5	456 aa	Known RBP	13.5	□□□□□ -0.25
CACNA1A-255	ENST00000637966	TSKS	Q9UJT2	592 aa		13.5	□□□□□ -0.25
CACNA1A-255	ENST00000637966	PES1	O00541	588 aa	Known RBP	13.49	□□□□□ -0.25
CACNA1A-255	ENST00000637966	EPB41	P11171	864 aa	Known RBP	13.49	□□□□□ -0.25
CACNA1A-255	ENST00000637966	PSMC2	P35998	433 aa	Known RBP	13.49	□□□□□ -0.25
CACNA1A-255	ENST00000637966	EFNA5	P52803	228 aa		13.49	□□□□□ -0.25
CACNA1A-255	ENST00000637966	TFDP1	Q14186	410 aa		13.49	□□□□□ -0.25
CACNA1A-255	ENST00000637966	CDCA2	Q69YH5	1023 aa	Predicted RBP	13.49	□□□□□ -0.25
CACNA1A-255	ENST00000637966	RNF149	Q8NC42	400 aa		13.49	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms