RNA–Protein interactions for RNA: ENST00000637927.1

CACNA1A-253, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-253ENST00000637927 EMILIN3Q9NT22 766 aa18.07■□□□□ 0.48
CACNA1A-253ENST00000637927 TXLNGQ9NUQ3 528 aa18.07■□□□□ 0.48
CACNA1A-253ENST00000637927 MTM1Q13496 603 aa18.07■□□□□ 0.48
CACNA1A-253ENST00000637927 ZNF658Q5TYW1 1059 aaPredicted RBP18.07■□□□□ 0.48
CACNA1A-253ENST00000637927 APOA5Q6Q788 366 aa18.07■□□□□ 0.48
CACNA1A-253ENST00000637927 GSPT2Q8IYD1 628 aaKnown RBP18.07■□□□□ 0.48
CACNA1A-253ENST00000637927 CCDC197Q8NCU1 140 aa18.07■□□□□ 0.48
CACNA1A-253ENST00000637927 PARVGQ9HBI0 331 aa18.07■□□□□ 0.48
CACNA1A-253ENST00000637927 HSPBP1Q9NZL4 362 aa18.07■□□□□ 0.48
CACNA1A-253ENST00000637927 PI4KBQ9UBF8 816 aa18.07■□□□□ 0.48
CACNA1A-253ENST00000637927 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.07■□□□□ 0.48
CACNA1A-253ENST00000637927 NEUROD4Q9HD90 331 aa18.07■□□□□ 0.48
CACNA1A-253ENST00000637927 TMEM260Q9NX78 707 aa18.07■□□□□ 0.48
CACNA1A-253ENST00000637927 ARAP3Q8WWN8 1544 aa18.07■□□□□ 0.48
CACNA1A-253ENST00000637927 KRT72Q14CN4 511 aa18.07■□□□□ 0.48
CACNA1A-253ENST00000637927 FASTKD1Q53R41 847 aaKnown RBP18.07■□□□□ 0.48
CACNA1A-253ENST00000637927 FGD2Q7Z6J4 655 aa18.07■□□□□ 0.48
CACNA1A-253ENST00000637927 WDR75Q8IWA0 830 aaKnown RBP18.07■□□□□ 0.48
CACNA1A-253ENST00000637927 NBPF15Q8N660 670 aa18.07■□□□□ 0.48
CACNA1A-253ENST00000637927 SSH3Q8TE77 659 aa18.07■□□□□ 0.48
CACNA1A-253ENST00000637927 WRNIP1Q96S55 665 aa18.07■□□□□ 0.48
CACNA1A-253ENST00000637927 ARHGEF9O43307 516 aa18.07■□□□□ 0.48
CACNA1A-253ENST00000637927 EIF4A3P38919 411 aaKnown RBP18.07■□□□□ 0.48
CACNA1A-253ENST00000637927 BTN2A1Q7KYR7 527 aa18.07■□□□□ 0.48
CACNA1A-253ENST00000637927 SEPT12Q8IYM1 358 aa18.07■□□□□ 0.48
CACNA1A-253ENST00000637927 GPATCH4Q5T3I0 446 aaKnown RBP18.06■□□□□ 0.48
CACNA1A-253ENST00000637927 TADA2BQ86TJ2 420 aa18.06■□□□□ 0.48
CACNA1A-253ENST00000637927 SEPT5Q99719 369 aaPredicted RBP18.06■□□□□ 0.48
CACNA1A-253ENST00000637927 JPH2Q9BR39 696 aaPredicted RBP18.06■□□□□ 0.48
CACNA1A-253ENST00000637927 UNC45AQ9H3U1 944 aa18.06■□□□□ 0.48
CACNA1A-253ENST00000637927 ZNF711Q9Y462 761 aa18.06■□□□□ 0.48
CACNA1A-253ENST00000637927 ATP7AQ04656 1500 aa18.06■□□□□ 0.48
CACNA1A-253ENST00000637927 CYP21A2P08686 494 aa18.06■□□□□ 0.48
CACNA1A-253ENST00000637927 DHX9Q08211 1270 aaKnown RBP18.06■□□□□ 0.48
CACNA1A-253ENST00000637927 HLFQ16534 295 aa18.06■□□□□ 0.48
CACNA1A-253ENST00000637927 CEP78Q5JTW2 689 aa18.06■□□□□ 0.48
CACNA1A-253ENST00000637927 PCDHA13Q9Y5I0 950 aa18.06■□□□□ 0.48
CACNA1A-253ENST00000637927 MYOM2P54296 1465 aa18.06■□□□□ 0.48
CACNA1A-253ENST00000637927 IQCA1LA6NCM1 817 aa18.06■□□□□ 0.48
CACNA1A-253ENST00000637927 K7ERI5 159 aa18.06■□□□□ 0.48
CACNA1A-253ENST00000637927 CYTH3O43739 400 aa18.06■□□□□ 0.48
CACNA1A-253ENST00000637927 ZMYM1Q5SVZ6 1142 aa18.06■□□□□ 0.48
CACNA1A-253ENST00000637927 FOXR1Q6PIV2 292 aa18.06■□□□□ 0.48
CACNA1A-253ENST00000637927 SNX31Q8N9S9 440 aa18.06■□□□□ 0.48
CACNA1A-253ENST00000637927 SERBP1Q8NC51 408 aaKnown RBP eCLIP18.06■□□□□ 0.48
CACNA1A-253ENST00000637927 RIN3Q8TB24 985 aa18.06■□□□□ 0.48
CACNA1A-253ENST00000637927 TAF1BQ53T94 588 aaPredicted RBP18.06■□□□□ 0.48
CACNA1A-253ENST00000637927 OSBP2Q969R2 916 aa18.06■□□□□ 0.48
CACNA1A-253ENST00000637927 TRIM15Q9C019 465 aa18.06■□□□□ 0.48
CACNA1A-253ENST00000637927 MUC3BQ9H195 1237 aa18.06■□□□□ 0.48
CACNA1A-253ENST00000637927 KLHL18O94889 574 aa18.06■□□□□ 0.48
CACNA1A-253ENST00000637927 PPARGP37231 505 aaPredicted RBP18.06■□□□□ 0.48
CACNA1A-253ENST00000637927 ZNF772Q68DY9 489 aaPredicted RBP18.06■□□□□ 0.48
CACNA1A-253ENST00000637927 ARMCX2Q7L311 632 aa18.06■□□□□ 0.48
CACNA1A-253ENST00000637927 MFN1Q8IWA4 741 aa18.06■□□□□ 0.48
CACNA1A-253ENST00000637927 JADE3Q92613 823 aa18.06■□□□□ 0.48
CACNA1A-253ENST00000637927 KANSL2Q9H9L4 492 aa18.06■□□□□ 0.48
CACNA1A-253ENST00000637927 GAP43P17677 238 aa18.06■□□□□ 0.48
CACNA1A-253ENST00000637927 TCN1P20061 433 aaPredicted RBP18.06■□□□□ 0.48
CACNA1A-253ENST00000637927 AARSP49588 968 aaKnown RBP eCLIP18.06■□□□□ 0.48
CACNA1A-253ENST00000637927 UXS1Q8NBZ7 420 aa18.06■□□□□ 0.48
CACNA1A-253ENST00000637927 DCUN1D1Q96GG9 259 aa18.06■□□□□ 0.48
CACNA1A-253ENST00000637927 PNKPQ96T60 521 aa18.06■□□□□ 0.48
CACNA1A-253ENST00000637927 LMNAP02545 664 aaKnown RBP18.05■□□□□ 0.48
CACNA1A-253ENST00000637927 STAT3P40763 770 aa18.05■□□□□ 0.48
CACNA1A-253ENST00000637927 CUL1Q13616 776 aa18.05■□□□□ 0.48
CACNA1A-253ENST00000637927 FAM167BQ9BTA0 163 aa18.05■□□□□ 0.48
CACNA1A-253ENST00000637927 UPF3AQ9H1J1 476 aaKnown RBP18.05■□□□□ 0.48
CACNA1A-253ENST00000637927 CRKP46108 304 aa18.05■□□□□ 0.48
CACNA1A-253ENST00000637927 RNF181Q9P0P0 153 aa18.05■□□□□ 0.48
CACNA1A-253ENST00000637927 GOLGA8RI6L899 631 aa18.05■□□□□ 0.48
CACNA1A-253ENST00000637927 TTI1O43156 1089 aa18.05■□□□□ 0.48
CACNA1A-253ENST00000637927 BPIFB4P59827 614 aa18.05■□□□□ 0.48
CACNA1A-253ENST00000637927 CYTH1Q15438 398 aa18.05■□□□□ 0.48
CACNA1A-253ENST00000637927 PAN2Q504Q3 1202 aaKnown RBP18.05■□□□□ 0.48
CACNA1A-253ENST00000637927 MCTP2Q6DN12 878 aa18.05■□□□□ 0.48
CACNA1A-253ENST00000637927 MMP1P03956 469 aa18.05■□□□□ 0.48
CACNA1A-253ENST00000637927 MAP4P27816 1152 aaKnown RBP18.05■□□□□ 0.48
CACNA1A-253ENST00000637927 EFTUD2Q15029 972 aaKnown RBP eCLIP18.05■□□□□ 0.48
CACNA1A-253ENST00000637927 RNF103-CHMP3A0A140T963 221 aa18.05■□□□□ 0.48
CACNA1A-253ENST00000637927 IQCMA0A1B0GVH7 501 aa18.05■□□□□ 0.48
CACNA1A-253ENST00000637927 RASSF10A6NK89 507 aa18.05■□□□□ 0.48
CACNA1A-253ENST00000637927 M0QYV0 167 aa18.05■□□□□ 0.48
CACNA1A-253ENST00000637927 ALDH18A1P54886 795 aaKnown RBP18.05■□□□□ 0.48
CACNA1A-253ENST00000637927 E2F4Q16254 413 aa18.05■□□□□ 0.48
CACNA1A-253ENST00000637927 SLC25A41Q8N5S1 370 aa18.05■□□□□ 0.48
CACNA1A-253ENST00000637927 EFHBQ8N7U6 833 aa18.05■□□□□ 0.48
CACNA1A-253ENST00000637927 SPATS2LQ9NUQ6 558 aaKnown RBP18.05■□□□□ 0.48
CACNA1A-253ENST00000637927 SP100P23497 879 aaPredicted RBP18.04■□□□□ 0.48
CACNA1A-253ENST00000637927 LMBRD2Q68DH5 695 aaPredicted RBP18.04■□□□□ 0.48
CACNA1A-253ENST00000637927 NLRP10Q86W26 655 aa18.04■□□□□ 0.48
CACNA1A-253ENST00000637927 ENDOD1O94919 500 aa18.04■□□□□ 0.48
CACNA1A-253ENST00000637927 PARNO95453 639 aaKnown RBP18.04■□□□□ 0.48
CACNA1A-253ENST00000637927 MTMR1Q13613 665 aa18.04■□□□□ 0.48
CACNA1A-253ENST00000637927 AP1ARQ63HQ0 302 aa18.04■□□□□ 0.48
CACNA1A-253ENST00000637927 FAM213AQ9BRX8 229 aa18.04■□□□□ 0.48
CACNA1A-253ENST00000637927 CAB39Q9Y376 341 aaPredicted RBP18.04■□□□□ 0.48
CACNA1A-253ENST00000637927 DTNAQ9Y4J8 743 aa18.04■□□□□ 0.48
CACNA1A-253ENST00000637927 GYS1P13807 737 aa18.04■□□□□ 0.48
CACNA1A-253ENST00000637927 ZNF568Q3ZCX4 644 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms