RNA–Protein interactions for RNA: ENST00000637844.1

CACNA1D-227, Transcript of calcium voltage-gated channel subunit alpha1 D, humanhuman

TSL 3

Gene CACNA1D, Length 548 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1D-227ENST00000637844 IQSEC1Q6DN90 963 aa6.87□□□□□ -1.31
CACNA1D-227ENST00000637844 SLFN12LQ6IEE8 588 aa6.87□□□□□ -1.31
CACNA1D-227ENST00000637844 TOGARAM2Q6ZUX3 1019 aa6.87□□□□□ -1.31
CACNA1D-227ENST00000637844 NYAP1Q6ZVC0 841 aa6.87□□□□□ -1.31
CACNA1D-227ENST00000637844 KIAA1328Q86T90 577 aa6.87□□□□□ -1.31
CACNA1D-227ENST00000637844 SAPCD2Q86UD0 394 aa6.87□□□□□ -1.31
CACNA1D-227ENST00000637844 VPS36Q86VN1 386 aa6.87□□□□□ -1.31
CACNA1D-227ENST00000637844 EHBP1Q8NDI1 1231 aa6.87□□□□□ -1.31
CACNA1D-227ENST00000637844 SMC1BQ8NDV3 1235 aa6.87□□□□□ -1.31
CACNA1D-227ENST00000637844 PPTC7Q8NI37 304 aa6.87□□□□□ -1.31
CACNA1D-227ENST00000637844 PSPC1Q8WXF1 523 aaKnown RBP6.87□□□□□ -1.31
CACNA1D-227ENST00000637844 SOCS4Q8WXH5 440 aa6.87□□□□□ -1.31
CACNA1D-227ENST00000637844 SLC35C1Q96A29 364 aa6.87□□□□□ -1.31
CACNA1D-227ENST00000637844 EMID1Q96A84 441 aaPredicted RBP6.87□□□□□ -1.31
CACNA1D-227ENST00000637844 TMEM143Q96AN5 459 aa6.87□□□□□ -1.31
CACNA1D-227ENST00000637844 SPAG5Q96R06 1193 aa6.87□□□□□ -1.31
CACNA1D-227ENST00000637844 PTPN18Q99952 460 aa6.87□□□□□ -1.31
CACNA1D-227ENST00000637844 TINF2Q9BSI4 451 aa6.87□□□□□ -1.31
CACNA1D-227ENST00000637844 TSGA10Q9BZW7 698 aa6.87□□□□□ -1.31
CACNA1D-227ENST00000637844 PCIF1Q9H4Z3 704 aa6.87□□□□□ -1.31
CACNA1D-227ENST00000637844 GPBP1L1Q9HC44 474 aaPredicted RBP6.87□□□□□ -1.31
CACNA1D-227ENST00000637844 PDLIM7Q9NR12 457 aa6.87□□□□□ -1.31
CACNA1D-227ENST00000637844 AGPAT5Q9NUQ2 364 aa6.87□□□□□ -1.31
CACNA1D-227ENST00000637844 HSPBP1Q9NZL4 362 aa6.87□□□□□ -1.31
CACNA1D-227ENST00000637844 GCNT4Q9P109 453 aa6.87□□□□□ -1.31
CACNA1D-227ENST00000637844 CPA4Q9UI42 421 aa6.87□□□□□ -1.31
CACNA1D-227ENST00000637844 ZHX1Q9UKY1 873 aaPredicted RBP6.87□□□□□ -1.31
CACNA1D-227ENST00000637844 MYO6Q9UM54 1294 aa6.87□□□□□ -1.31
CACNA1D-227ENST00000637844 PLAGL2Q9UPG8 496 aa6.87□□□□□ -1.31
CACNA1D-227ENST00000637844 ADGRG1Q9Y653 693 aa6.87□□□□□ -1.31
CACNA1D-227ENST00000637844 BZW2Q9Y6E2 419 aaKnown RBP6.87□□□□□ -1.31
CACNA1D-227ENST00000637844 EPN1Q9Y6I3 576 aaPredicted RBP6.87□□□□□ -1.31
CACNA1D-227ENST00000637844 TLL2Q9Y6L7 1015 aa6.87□□□□□ -1.31
CACNA1D-227ENST00000637844 LRRC53A6NM62 1247 aa6.86□□□□□ -1.31
CACNA1D-227ENST00000637844 EIF3CLB5ME19 914 aaKnown RBP6.86□□□□□ -1.31
CACNA1D-227ENST00000637844 TULP1O00294 542 aaPredicted RBP6.86□□□□□ -1.31
CACNA1D-227ENST00000637844 MAGEB2O15479 319 aa6.86□□□□□ -1.31
CACNA1D-227ENST00000637844 ASAP2O43150 1006 aa6.86□□□□□ -1.31
CACNA1D-227ENST00000637844 KRT86O43790 486 aa6.86□□□□□ -1.31
CACNA1D-227ENST00000637844 AKR1B10O60218 316 aa6.86□□□□□ -1.31
CACNA1D-227ENST00000637844 PPFIA4O75335 1185 aa6.86□□□□□ -1.31
CACNA1D-227ENST00000637844 ALDH1A1P00352 501 aa6.86□□□□□ -1.31
CACNA1D-227ENST00000637844 SERPING1P05155 500 aa6.86□□□□□ -1.31
CACNA1D-227ENST00000637844 HOXC6P09630 235 aa6.86□□□□□ -1.31
CACNA1D-227ENST00000637844 ATP4AP20648 1035 aa6.86□□□□□ -1.31
CACNA1D-227ENST00000637844 MARK3P27448 753 aa6.86□□□□□ -1.31
CACNA1D-227ENST00000637844 TMOD1P28289 359 aa6.86□□□□□ -1.31
CACNA1D-227ENST00000637844 CNGA1P29973 690 aa6.86□□□□□ -1.31
CACNA1D-227ENST00000637844 CASQ1P31415 396 aa6.86□□□□□ -1.31
CACNA1D-227ENST00000637844 HNRNPH3P31942 346 aaKnown RBP6.86□□□□□ -1.31
CACNA1D-227ENST00000637844 GNG11P61952 73 aa6.86□□□□□ -1.31
CACNA1D-227ENST00000637844 ETF1P62495 437 aaKnown RBP6.86□□□□□ -1.31
CACNA1D-227ENST00000637844 ARHGAP1Q07960 439 aa6.86□□□□□ -1.31
CACNA1D-227ENST00000637844 KCNMA1Q12791 1236 aa6.86□□□□□ -1.31
CACNA1D-227ENST00000637844 MAP2K5Q13163 448 aa6.86□□□□□ -1.31
CACNA1D-227ENST00000637844 ACVR2BQ13705 512 aa6.86□□□□□ -1.31
CACNA1D-227ENST00000637844 RAPGEF1Q13905 1077 aa6.86□□□□□ -1.31
CACNA1D-227ENST00000637844 PLCB4Q15147 1175 aa6.86□□□□□ -1.31
CACNA1D-227ENST00000637844 TARBP2Q15633 366 aaKnown RBP6.86□□□□□ -1.31
CACNA1D-227ENST00000637844 SNRNP35Q16560 246 aaKnown RBP6.86□□□□□ -1.31
CACNA1D-227ENST00000637844 TMEM132AQ24JP5 1023 aa6.86□□□□□ -1.31
CACNA1D-227ENST00000637844 TDRD12Q587J7 1177 aaKnown RBP6.86□□□□□ -1.31
CACNA1D-227ENST00000637844 TAPT1Q6NXT6 567 aa6.86□□□□□ -1.31
CACNA1D-227ENST00000637844 PDXDC1Q6P996 788 aa6.86□□□□□ -1.31
CACNA1D-227ENST00000637844 RAD9BQ6WBX8 426 aa6.86□□□□□ -1.31
CACNA1D-227ENST00000637844 PAXIP1Q6ZW49 1069 aaPredicted RBP6.86□□□□□ -1.31
CACNA1D-227ENST00000637844 IFNL1Q8IU54 200 aa6.86□□□□□ -1.31
CACNA1D-227ENST00000637844 REXO1L1PQ8IX06 675 aa6.86□□□□□ -1.31
CACNA1D-227ENST00000637844 GPD1LQ8N335 351 aa6.86□□□□□ -1.31
CACNA1D-227ENST00000637844 RDH13Q8NBN7 331 aa6.86□□□□□ -1.31
CACNA1D-227ENST00000637844 OR6J1Q8NGC5 347 aa6.86□□□□□ -1.31
CACNA1D-227ENST00000637844 KCNN1Q92952 543 aa6.86□□□□□ -1.31
CACNA1D-227ENST00000637844 PCYT2Q99447 389 aa6.86□□□□□ -1.31
CACNA1D-227ENST00000637844 EIF3CQ99613 913 aaKnown RBP6.86□□□□□ -1.31
CACNA1D-227ENST00000637844 CBWD1Q9BRT8 395 aa6.86□□□□□ -1.31
CACNA1D-227ENST00000637844 CRACR2AQ9BSW2 395 aa6.86□□□□□ -1.31
CACNA1D-227ENST00000637844 DESI2Q9BSY9 194 aa6.86□□□□□ -1.31
CACNA1D-227ENST00000637844 KIFC3Q9BVG8 833 aa6.86□□□□□ -1.31
CACNA1D-227ENST00000637844 HAUS4Q9H6D7 363 aa6.86□□□□□ -1.31
CACNA1D-227ENST00000637844 TMEM134Q9H6X4 195 aa6.86□□□□□ -1.31
CACNA1D-227ENST00000637844 NHEJ1Q9H9Q4 299 aaPredicted RBP6.86□□□□□ -1.31
CACNA1D-227ENST00000637844 NLRC4Q9NPP4 1024 aa6.86□□□□□ -1.31
CACNA1D-227ENST00000637844 LZTFL1Q9NQ48 299 aa6.86□□□□□ -1.31
CACNA1D-227ENST00000637844 XPNPEP1Q9NQW7 623 aa6.86□□□□□ -1.31
CACNA1D-227ENST00000637844 ARHGAP28Q9P2N2 729 aa6.86□□□□□ -1.31
CACNA1D-227ENST00000637844 MYO1AQ9UBC5 1043 aa6.86□□□□□ -1.31
CACNA1D-227ENST00000637844 FBXL5Q9UKA1 691 aa6.86□□□□□ -1.31
CACNA1D-227ENST00000637844 ADGRA2Q96PE1 1338 aa6.85□□□□□ -1.31
CACNA1D-227ENST00000637844 PASKQ96RG2 1323 aa6.85□□□□□ -1.31
CACNA1D-227ENST00000637844 SSU72P8A0A1W2PR75 194 aa6.85□□□□□ -1.31
CACNA1D-227ENST00000637844 ZNF233A6NK53 670 aa6.85□□□□□ -1.31
CACNA1D-227ENST00000637844 RASSF10A6NK89 507 aa6.85□□□□□ -1.31
CACNA1D-227ENST00000637844 TMEM88BA6NKF7 163 aa6.85□□□□□ -1.31
CACNA1D-227ENST00000637844 RNF225M0QZC1 329 aaPredicted RBP6.85□□□□□ -1.31
CACNA1D-227ENST00000637844 IGF2BP3O00425 579 aaKnown RBP eCLIP6.85□□□□□ -1.31
CACNA1D-227ENST00000637844 TNPO2O14787 897 aaKnown RBP6.85□□□□□ -1.31
CACNA1D-227ENST00000637844 EXTL3O43909 919 aa6.85□□□□□ -1.31
CACNA1D-227ENST00000637844 ADCY3O60266 1144 aa6.85□□□□□ -1.31
CACNA1D-227ENST00000637844 TLR2O60603 784 aa6.85□□□□□ -1.31
CACNA1D-227ENST00000637844 LGALS2P05162 132 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms