RNA–Protein interactions for RNA: ENST00000637552.1

CHRNA7-229, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 5

Gene CHRNA7, Length 955 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-229ENST00000637552 DYDC2Q96IM9 177 aa25.48■■□□□ 1.67
CHRNA7-229ENST00000637552 FAM105AQ9NUU6 356 aa25.48■■□□□ 1.67
CHRNA7-229ENST00000637552 USP15Q9Y4E8 981 aaPredicted RBP25.48■■□□□ 1.67
CHRNA7-229ENST00000637552 GAS2O43903 313 aaKnown RBP25.47■■□□□ 1.67
CHRNA7-229ENST00000637552 ALDH7A1P49419 539 aaKnown RBP25.47■■□□□ 1.67
CHRNA7-229ENST00000637552 RBM10P98175 930 aaKnown RBP25.47■■□□□ 1.67
CHRNA7-229ENST00000637552 SPIRE1Q08AE8 756 aa25.47■■□□□ 1.67
CHRNA7-229ENST00000637552 CTTNQ14247 550 aaKnown RBP25.47■■□□□ 1.67
CHRNA7-229ENST00000637552 EMC2Q15006 297 aa25.47■■□□□ 1.67
CHRNA7-229ENST00000637552 XKR9Q5GH70 373 aa25.47■■□□□ 1.67
CHRNA7-229ENST00000637552 GLB1LQ6UWU2 654 aa25.47■■□□□ 1.67
CHRNA7-229ENST00000637552 SLC39A11Q8N1S5 342 aa25.47■■□□□ 1.67
CHRNA7-229ENST00000637552 TCP11Q8WWU5 503 aa25.47■■□□□ 1.67
CHRNA7-229ENST00000637552 PRPF31Q8WWY3 499 aaKnown RBP25.47■■□□□ 1.67
CHRNA7-229ENST00000637552 FAM122AQ96E09 287 aa25.47■■□□□ 1.67
CHRNA7-229ENST00000637552 IFT122Q9HBG6 1241 aa25.47■■□□□ 1.67
CHRNA7-229ENST00000637552 ARID2Q68CP9 1835 aa25.47■■□□□ 1.67
CHRNA7-229ENST00000637552 SRGAP2CP0DJJ0 459 aa25.46■■□□□ 1.67
CHRNA7-229ENST00000637552 CALCRLQ16602 461 aa25.46■■□□□ 1.67
CHRNA7-229ENST00000637552 LONRF3Q496Y0 759 aa25.46■■□□□ 1.67
CHRNA7-229ENST00000637552 TPH2Q8IWU9 490 aa25.46■■□□□ 1.67
CHRNA7-229ENST00000637552 DIS3L2Q8IYB7 885 aaKnown RBP25.46■■□□□ 1.67
CHRNA7-229ENST00000637552 VN1R2Q8NFZ6 395 aa25.46■■□□□ 1.67
CHRNA7-229ENST00000637552 LPPQ93052 612 aa25.46■■□□□ 1.67
CHRNA7-229ENST00000637552 TMEM169Q96HH4 297 aa25.46■■□□□ 1.67
CHRNA7-229ENST00000637552 INPP5FQ9Y2H2 1132 aa25.46■■□□□ 1.67
CHRNA7-229ENST00000637552 HIDE1A8MVS5 230 aa25.45■■□□□ 1.66
CHRNA7-229ENST00000637552 JAK2O60674 1132 aa25.45■■□□□ 1.66
CHRNA7-229ENST00000637552 ZC3H11AO75152 810 aaKnown RBP eCLIP25.45■■□□□ 1.66
CHRNA7-229ENST00000637552 PLA2G5P39877 138 aa25.45■■□□□ 1.66
CHRNA7-229ENST00000637552 BCAR1P56945 870 aa25.45■■□□□ 1.66
CHRNA7-229ENST00000637552 LAMTOR4Q0VGL1 99 aa25.45■■□□□ 1.66
CHRNA7-229ENST00000637552 SMC1AQ14683 1233 aaKnown RBP25.45■■□□□ 1.66
CHRNA7-229ENST00000637552 BMS1Q14692 1282 aaKnown RBP25.45■■□□□ 1.66
CHRNA7-229ENST00000637552 SRGAP1Q7Z6B7 1085 aa25.45■■□□□ 1.66
CHRNA7-229ENST00000637552 PGBD4Q96DM1 585 aa25.45■■□□□ 1.66
CHRNA7-229ENST00000637552 AGPAT5Q9NUQ2 364 aa25.45■■□□□ 1.66
CHRNA7-229ENST00000637552 PCDHA12Q9UN75 941 aa25.45■■□□□ 1.66
CHRNA7-229ENST00000637552 CARNS1A5YM72 827 aa25.44■■□□□ 1.66
CHRNA7-229ENST00000637552 BTBD18B2RXH4 712 aa25.44■■□□□ 1.66
CHRNA7-229ENST00000637552 NT5C1B-RDH14C9J2C7 533 aa25.44■■□□□ 1.66
CHRNA7-229ENST00000637552 CA8P35219 290 aa25.44■■□□□ 1.66
CHRNA7-229ENST00000637552 TECP42680 631 aa25.44■■□□□ 1.66
CHRNA7-229ENST00000637552 RNASELQ05823 741 aaKnown RBP25.44■■□□□ 1.66
CHRNA7-229ENST00000637552 NOMO2Q5JPE7 1267 aa25.44■■□□□ 1.66
CHRNA7-229ENST00000637552 LLGL2Q6P1M3 1020 aa25.44■■□□□ 1.66
CHRNA7-229ENST00000637552 RNF135Q8IUD6 432 aa25.44■■□□□ 1.66
CHRNA7-229ENST00000637552 CCDC43Q96MW1 224 aaKnown RBP25.44■■□□□ 1.66
CHRNA7-229ENST00000637552 MTRQ99707 1265 aa25.44■■□□□ 1.66
CHRNA7-229ENST00000637552 MUTYHQ9UIF7 546 aa25.44■■□□□ 1.66
CHRNA7-229ENST00000637552 ASAP2O43150 1006 aa25.43■■□□□ 1.66
CHRNA7-229ENST00000637552 NEMFO60524 1076 aa25.43■■□□□ 1.66
CHRNA7-229ENST00000637552 ZNF623O75123 536 aa25.43■■□□□ 1.66
CHRNA7-229ENST00000637552 RNF149Q8NC42 400 aa25.43■■□□□ 1.66
CHRNA7-229ENST00000637552 EIF2AK1Q9BQI3 630 aaKnown RBP25.43■■□□□ 1.66
CHRNA7-229ENST00000637552 TBC1D13Q9NVG8 400 aa25.43■■□□□ 1.66
CHRNA7-229ENST00000637552 ARIH1Q9Y4X5 557 aaPredicted RBP25.43■■□□□ 1.66
CHRNA7-229ENST00000637552 PCDHB2Q9Y5E7 798 aa25.43■■□□□ 1.66
CHRNA7-229ENST00000637552 MUC6Q6W4X9 2439 aa25.43■■□□□ 1.66
CHRNA7-229ENST00000637552 ZBTB39O15060 712 aa25.42■■□□□ 1.66
CHRNA7-229ENST00000637552 SLITRK3O94933 977 aa25.42■■□□□ 1.66
CHRNA7-229ENST00000637552 HERC4Q5GLZ8 1057 aaPredicted RBP25.42■■□□□ 1.66
CHRNA7-229ENST00000637552 ANKRD54Q6NXT1 300 aa25.42■■□□□ 1.66
CHRNA7-229ENST00000637552 TMEM184AQ6ZMB5 413 aa25.42■■□□□ 1.66
CHRNA7-229ENST00000637552 FERMT3Q86UX7 667 aa25.42■■□□□ 1.66
CHRNA7-229ENST00000637552 PHF7Q9BWX1 381 aaPredicted RBP25.42■■□□□ 1.66
CHRNA7-229ENST00000637552 TTC12Q9H892 705 aaPredicted RBP25.42■■□□□ 1.66
CHRNA7-229ENST00000637552 MINDY3Q9H8M7 445 aa25.42■■□□□ 1.66
CHRNA7-229ENST00000637552 MEIS3P2A8K0S8 358 aa25.41■■□□□ 1.66
CHRNA7-229ENST00000637552 ERLIN2O94905 339 aa25.41■■□□□ 1.66
CHRNA7-229ENST00000637552 TXKP42681 527 aa25.41■■□□□ 1.66
CHRNA7-229ENST00000637552 KCNC3Q14003 757 aa25.41■■□□□ 1.66
CHRNA7-229ENST00000637552 MRPL43Q8N983 215 aaKnown RBP25.41■■□□□ 1.66
CHRNA7-229ENST00000637552 URGCPQ8TCY9 931 aa25.41■■□□□ 1.66
CHRNA7-229ENST00000637552 GBP3Q9H0R5 595 aa25.41■■□□□ 1.66
CHRNA7-229ENST00000637552 C2orf71A6NGG8 1288 aa25.4■■□□□ 1.66
CHRNA7-229ENST00000637552 OFD1O75665 1012 aa25.4■■□□□ 1.66
CHRNA7-229ENST00000637552 LYPLA2O95372 231 aa25.4■■□□□ 1.66
CHRNA7-229ENST00000637552 MXD4Q14582 209 aaPredicted RBP25.4■■□□□ 1.66
CHRNA7-229ENST00000637552 SAFBQ15424 915 aaKnown RBP eCLIP25.4■■□□□ 1.66
CHRNA7-229ENST00000637552 TMEM87AQ8NBN3 555 aa25.4■■□□□ 1.66
CHRNA7-229ENST00000637552 SUSD6Q92537 303 aa25.4■■□□□ 1.66
CHRNA7-229ENST00000637552 CASP10Q92851 521 aa25.4■■□□□ 1.66
CHRNA7-229ENST00000637552 RPGRIP1Q96KN7 1286 aa25.4■■□□□ 1.66
CHRNA7-229ENST00000637552 HSD17B14Q9BPX1 270 aa25.4■■□□□ 1.66
CHRNA7-229ENST00000637552 NRDE2Q9H7Z3 1164 aa25.4■■□□□ 1.66
CHRNA7-229ENST00000637552 LOC730098B7Z3J9 87 aa25.39■■□□□ 1.66
CHRNA7-229ENST00000637552 SEC24BO95487 1268 aa25.39■■□□□ 1.66
CHRNA7-229ENST00000637552 HOXB8P17481 243 aaPredicted RBP25.39■■□□□ 1.66
CHRNA7-229ENST00000637552 TFDP1Q14186 410 aa25.39■■□□□ 1.66
CHRNA7-229ENST00000637552 CBX2Q14781 532 aaPredicted RBP25.39■■□□□ 1.66
CHRNA7-229ENST00000637552 VPS52Q8N1B4 723 aa25.39■■□□□ 1.66
CHRNA7-229ENST00000637552 IGSF21Q96ID5 467 aa25.39■■□□□ 1.66
CHRNA7-229ENST00000637552 APOL5Q9BWW9 433 aa25.39■■□□□ 1.66
CHRNA7-229ENST00000637552 RSAD1Q9HA92 442 aa25.39■■□□□ 1.66
CHRNA7-229ENST00000637552 XPNPEP1Q9NQW7 623 aa25.39■■□□□ 1.66
CHRNA7-229ENST00000637552 CNTNAP2Q9UHC6 1331 aa25.38■■□□□ 1.65
CHRNA7-229ENST00000637552 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP25.38■■□□□ 1.65
CHRNA7-229ENST00000637552 DGAT1O75907 488 aa25.38■■□□□ 1.65
CHRNA7-229ENST00000637552 HOXA11P31270 313 aaPredicted RBP25.38■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms