RNA–Protein interactions for RNA: ENST00000637450.1

CLN6-220, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3

Gene CLN6, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-220ENST00000637450 FAM105AQ9NUU6 356 aa20.67■□□□□ 0.9
CLN6-220ENST00000637450 ORC3Q9UBD5 711 aaPredicted RBP20.67■□□□□ 0.9
CLN6-220ENST00000637450 COL4A3BPQ9Y5P4 624 aa20.67■□□□□ 0.9
CLN6-220ENST00000637450 MARCH6O60337 910 aa20.66■□□□□ 0.9
CLN6-220ENST00000637450 FDPSP14324 419 aaKnown RBP20.66■□□□□ 0.9
CLN6-220ENST00000637450 HOXB8P17481 243 aaPredicted RBP20.66■□□□□ 0.9
CLN6-220ENST00000637450 RFC5P40937 340 aa20.66■□□□□ 0.9
CLN6-220ENST00000637450 RAB27AP51159 221 aa20.66■□□□□ 0.9
CLN6-220ENST00000637450 AK2P54819 239 aa20.66■□□□□ 0.9
CLN6-220ENST00000637450 LONRF3Q496Y0 759 aa20.66■□□□□ 0.9
CLN6-220ENST00000637450 POTEDQ86YR6 584 aa20.66■□□□□ 0.9
CLN6-220ENST00000637450 TMEM143Q96AN5 459 aa20.66■□□□□ 0.9
CLN6-220ENST00000637450 MFSD14AQ96MC6 490 aa20.66■□□□□ 0.9
CLN6-220ENST00000637450 LXNQ9BS40 222 aa20.66■□□□□ 0.9
CLN6-220ENST00000637450 RGL1Q9NZL6 768 aa20.66■□□□□ 0.9
CLN6-220ENST00000637450 CARNS1A5YM72 827 aa20.65■□□□□ 0.9
CLN6-220ENST00000637450 MEIS3P2A8K0S8 358 aa20.65■□□□□ 0.9
CLN6-220ENST00000637450 OFD1O75665 1012 aa20.65■□□□□ 0.9
CLN6-220ENST00000637450 CXCL14O95715 111 aa20.65■□□□□ 0.9
CLN6-220ENST00000637450 YWHABP31946 246 aaKnown RBP20.65■□□□□ 0.9
CLN6-220ENST00000637450 POLGP54098 1239 aaPredicted RBP20.65■□□□□ 0.9
CLN6-220ENST00000637450 ZXDAP98168 799 aa20.65■□□□□ 0.9
CLN6-220ENST00000637450 SPIRE1Q08AE8 756 aa20.65■□□□□ 0.9
CLN6-220ENST00000637450 NOMO2Q5JPE7 1267 aa20.65■□□□□ 0.9
CLN6-220ENST00000637450 GLB1LQ6UWU2 654 aa20.65■□□□□ 0.9
CLN6-220ENST00000637450 TRIM67Q6ZTA4 783 aa20.65■□□□□ 0.9
CLN6-220ENST00000637450 OTUD6AQ7L8S5 288 aa20.65■□□□□ 0.9
CLN6-220ENST00000637450 SRGAP1Q7Z6B7 1085 aa20.65■□□□□ 0.9
CLN6-220ENST00000637450 SLFN12Q8IYM2 578 aa20.65■□□□□ 0.9
CLN6-220ENST00000637450 PSPC1Q8WXF1 523 aaKnown RBP20.65■□□□□ 0.9
CLN6-220ENST00000637450 CASP10Q92851 521 aa20.65■□□□□ 0.9
CLN6-220ENST00000637450 TMEM169Q96HH4 297 aa20.65■□□□□ 0.9
CLN6-220ENST00000637450 KCNH6Q9H252 994 aa20.65■□□□□ 0.9
CLN6-220ENST00000637450 NRDE2Q9H7Z3 1164 aa20.65■□□□□ 0.9
CLN6-220ENST00000637450 AGPAT5Q9NUQ2 364 aa20.65■□□□□ 0.9
CLN6-220ENST00000637450 TBC1D13Q9NVG8 400 aa20.65■□□□□ 0.9
CLN6-220ENST00000637450 PIEZO1Q92508 2521 aa20.64■□□□□ 0.9
CLN6-220ENST00000637450 WDFY4Q6ZS81 3184 aa20.64■□□□□ 0.89
CLN6-220ENST00000637450 FAM205CA6NFA0 338 aa20.64■□□□□ 0.89
CLN6-220ENST00000637450 CLASP2O75122 1294 aaKnown RBP20.64■□□□□ 0.89
CLN6-220ENST00000637450 ZC3H11AO75152 810 aaKnown RBP eCLIP20.64■□□□□ 0.89
CLN6-220ENST00000637450 NEFLP07196 543 aa20.64■□□□□ 0.89
CLN6-220ENST00000637450 SRGAP2CP0DJJ0 459 aa20.64■□□□□ 0.89
CLN6-220ENST00000637450 HOXA11P31270 313 aaPredicted RBP20.64■□□□□ 0.89
CLN6-220ENST00000637450 LAMTOR4Q0VGL1 99 aa20.64■□□□□ 0.89
CLN6-220ENST00000637450 NR5A1Q13285 461 aa20.64■□□□□ 0.89
CLN6-220ENST00000637450 BMS1Q14692 1282 aaKnown RBP20.64■□□□□ 0.89
CLN6-220ENST00000637450 NCAPH2Q6IBW4 605 aa20.64■□□□□ 0.89
CLN6-220ENST00000637450 BMP8AQ7Z5Y6 402 aa20.64■□□□□ 0.89
CLN6-220ENST00000637450 MRPL10Q7Z7H8 261 aaKnown RBP20.64■□□□□ 0.89
CLN6-220ENST00000637450 TMEM173Q86WV6 379 aaPredicted RBP20.64■□□□□ 0.89
CLN6-220ENST00000637450 TNFRSF25Q93038 417 aa20.64■□□□□ 0.89
CLN6-220ENST00000637450 PGBD4Q96DM1 585 aa20.64■□□□□ 0.89
CLN6-220ENST00000637450 DYDC2Q96IM9 177 aa20.64■□□□□ 0.89
CLN6-220ENST00000637450 APOL5Q9BWW9 433 aa20.64■□□□□ 0.89
CLN6-220ENST00000637450 ZSWIM4Q9H7M6 989 aa20.64■□□□□ 0.89
CLN6-220ENST00000637450 MINDY3Q9H8M7 445 aa20.64■□□□□ 0.89
CLN6-220ENST00000637450 PCDHB2Q9Y5E7 798 aa20.64■□□□□ 0.89
CLN6-220ENST00000637450 HCFC2Q9Y5Z7 792 aa20.64■□□□□ 0.89
CLN6-220ENST00000637450 TECTAO75443 2155 aa20.63■□□□□ 0.89
CLN6-220ENST00000637450 ZBTB39O15060 712 aa20.63■□□□□ 0.89
CLN6-220ENST00000637450 ASAP2O43150 1006 aa20.63■□□□□ 0.89
CLN6-220ENST00000637450 SLITRK3O94933 977 aa20.63■□□□□ 0.89
CLN6-220ENST00000637450 BAG4O95429 457 aaKnown RBP20.63■□□□□ 0.89
CLN6-220ENST00000637450 GALTP07902 379 aa20.63■□□□□ 0.89
CLN6-220ENST00000637450 KRT2P35908 639 aa20.63■□□□□ 0.89
CLN6-220ENST00000637450 CTTNQ14247 550 aaKnown RBP20.63■□□□□ 0.89
CLN6-220ENST00000637450 ME3Q16798 604 aa20.63■□□□□ 0.89
CLN6-220ENST00000637450 DDX53Q86TM3 631 aaKnown RBP20.63■□□□□ 0.89
CLN6-220ENST00000637450 VPS52Q8N1B4 723 aa20.63■□□□□ 0.89
CLN6-220ENST00000637450 NECAB1Q8N987 351 aa20.63■□□□□ 0.89
CLN6-220ENST00000637450 IGSF21Q96ID5 467 aa20.63■□□□□ 0.89
CLN6-220ENST00000637450 FBXL18Q96ME1 805 aa20.63■□□□□ 0.89
CLN6-220ENST00000637450 ZBP1Q9H171 429 aa20.63■□□□□ 0.89
CLN6-220ENST00000637450 INPP5FQ9Y2H2 1132 aa20.63■□□□□ 0.89
CLN6-220ENST00000637450 IRAK3Q9Y616 596 aa20.63■□□□□ 0.89
CLN6-220ENST00000637450 TMEM221A6NGB7 291 aa20.62■□□□□ 0.89
CLN6-220ENST00000637450 M0R296 226 aa20.62■□□□□ 0.89
CLN6-220ENST00000637450 GAS2O43903 313 aaKnown RBP20.62■□□□□ 0.89
CLN6-220ENST00000637450 RNASELQ05823 741 aaKnown RBP20.62■□□□□ 0.89
CLN6-220ENST00000637450 EMC2Q15006 297 aa20.62■□□□□ 0.89
CLN6-220ENST00000637450 TPRNQ4KMQ1 711 aa20.62■□□□□ 0.89
CLN6-220ENST00000637450 XKR9Q5GH70 373 aa20.62■□□□□ 0.89
CLN6-220ENST00000637450 AGMOQ6ZNB7 445 aa20.62■□□□□ 0.89
CLN6-220ENST00000637450 TCP11Q8WWU5 503 aa20.62■□□□□ 0.89
CLN6-220ENST00000637450 BRMS1Q9HCU9 246 aa20.62■□□□□ 0.89
CLN6-220ENST00000637450 CTSAP10619 480 aa20.61■□□□□ 0.89
CLN6-220ENST00000637450 CYP4A11Q02928 519 aa20.61■□□□□ 0.89
CLN6-220ENST00000637450 ITIH3Q06033 890 aa20.61■□□□□ 0.89
CLN6-220ENST00000637450 UBXN11Q5T124 520 aa20.61■□□□□ 0.89
CLN6-220ENST00000637450 FERMT3Q86UX7 667 aa20.61■□□□□ 0.89
CLN6-220ENST00000637450 ZNF280BQ86YH2 543 aa20.61■□□□□ 0.89
CLN6-220ENST00000637450 TPH2Q8IWU9 490 aa20.61■□□□□ 0.89
CLN6-220ENST00000637450 RNF149Q8NC42 400 aa20.61■□□□□ 0.89
CLN6-220ENST00000637450 BCL7CQ8WUZ0 217 aaPredicted RBP20.61■□□□□ 0.89
CLN6-220ENST00000637450 GTF3C6Q969F1 213 aa20.61■□□□□ 0.89
CLN6-220ENST00000637450 HSD17B14Q9BPX1 270 aa20.61■□□□□ 0.89
CLN6-220ENST00000637450 ADAM7Q9H2U9 754 aa20.61■□□□□ 0.89
CLN6-220ENST00000637450 BMP2KQ9NSY1 1161 aaPredicted RBP20.61■□□□□ 0.89
CLN6-220ENST00000637450 DNAJB4Q9UDY4 337 aa20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms