RNA–Protein interactions for RNA: ENST00000637297.1

CACNA1A-239, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 637 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-239ENST00000637297 FAM13AO94988 1023 aa10.16□□□□□ -0.78
CACNA1A-239ENST00000637297 UPP2O95045 317 aa10.16□□□□□ -0.78
CACNA1A-239ENST00000637297 FGFR4P22455 802 aa10.16□□□□□ -0.78
CACNA1A-239ENST00000637297 GLRA2P23416 452 aa10.16□□□□□ -0.78
CACNA1A-239ENST00000637297 CMA1P23946 247 aa10.16□□□□□ -0.78
CACNA1A-239ENST00000637297 GUCY2CP25092 1073 aa10.16□□□□□ -0.78
CACNA1A-239ENST00000637297 NAMPTP43490 491 aa10.16□□□□□ -0.78
CACNA1A-239ENST00000637297 SMTNP53814 917 aa10.16□□□□□ -0.78
CACNA1A-239ENST00000637297 SLC12A3P55017 1021 aa10.16□□□□□ -0.78
CACNA1A-239ENST00000637297 WDR5P61964 334 aaKnown RBP10.16□□□□□ -0.78
CACNA1A-239ENST00000637297 AMPD3Q01432 767 aa10.16□□□□□ -0.78
CACNA1A-239ENST00000637297 POU5F1BQ06416 359 aa10.16□□□□□ -0.78
CACNA1A-239ENST00000637297 DMP1Q13316 513 aaPredicted RBP10.16□□□□□ -0.78
CACNA1A-239ENST00000637297 CAPSQ13938 189 aa10.16□□□□□ -0.78
CACNA1A-239ENST00000637297 CAMK4Q16566 473 aa10.16□□□□□ -0.78
CACNA1A-239ENST00000637297 LRIT3Q3SXY7 679 aa10.16□□□□□ -0.78
CACNA1A-239ENST00000637297 HABP4Q5JVS0 413 aaKnown RBP10.16□□□□□ -0.78
CACNA1A-239ENST00000637297 AXDND1Q5T1B0 1012 aaPredicted RBP10.16□□□□□ -0.78
CACNA1A-239ENST00000637297 SHC4Q6S5L8 630 aa10.16□□□□□ -0.78
CACNA1A-239ENST00000637297 FAM228AQ86W67 206 aa10.16□□□□□ -0.78
CACNA1A-239ENST00000637297 CEP57L1Q8IYX8 460 aa10.16□□□□□ -0.78
CACNA1A-239ENST00000637297 PHOSPHO2Q8TCD6 241 aa10.16□□□□□ -0.78
CACNA1A-239ENST00000637297 DHX58Q96C10 678 aa10.16□□□□□ -0.78
CACNA1A-239ENST00000637297 VWCEQ96DN2 955 aa10.16□□□□□ -0.78
CACNA1A-239ENST00000637297 RUSC1Q9BVN2 902 aa10.16□□□□□ -0.78
CACNA1A-239ENST00000637297 LRRC27Q9C0I9 530 aa10.16□□□□□ -0.78
CACNA1A-239ENST00000637297 C2orf40Q9H1Z8 148 aa10.16□□□□□ -0.78
CACNA1A-239ENST00000637297 GOLPH3LQ9H4A5 285 aa10.16□□□□□ -0.78
CACNA1A-239ENST00000637297 IFT122Q9HBG6 1241 aa10.16□□□□□ -0.78
CACNA1A-239ENST00000637297 ERVK-5Q9HDB9 667 aa10.16□□□□□ -0.78
CACNA1A-239ENST00000637297 BLOC1S4Q9NUP1 217 aa10.16□□□□□ -0.78
CACNA1A-239ENST00000637297 LARSQ9P2J5 1176 aaKnown RBP10.16□□□□□ -0.78
CACNA1A-239ENST00000637297 MSRAQ9UJ68 235 aa10.16□□□□□ -0.78
CACNA1A-239ENST00000637297 LRFN2Q9ULH4 789 aa10.16□□□□□ -0.78
CACNA1A-239ENST00000637297 NPHP3-ACAD11A0A0J9YXS1 232 aa10.15□□□□□ -0.78
CACNA1A-239ENST00000637297 SFI1A8K8P3 1242 aa10.15□□□□□ -0.78
CACNA1A-239ENST00000637297 POLR2DO15514 142 aaKnown RBP10.15□□□□□ -0.78
CACNA1A-239ENST00000637297 STAG3L1P0CL83 205 aa10.15□□□□□ -0.78
CACNA1A-239ENST00000637297 PEX3P56589 373 aa10.15□□□□□ -0.78
CACNA1A-239ENST00000637297 PTENP60484 403 aa10.15□□□□□ -0.78
CACNA1A-239ENST00000637297 CACNB1Q02641 598 aaPredicted RBP10.15□□□□□ -0.78
CACNA1A-239ENST00000637297 PCBP1Q15365 356 aaKnown RBP eCLIP10.15□□□□□ -0.78
CACNA1A-239ENST00000637297 TCTN1Q2MV58 587 aa10.15□□□□□ -0.78
CACNA1A-239ENST00000637297 RASIP1Q5U651 963 aa10.15□□□□□ -0.78
CACNA1A-239ENST00000637297 RESP18Q5W5W9 173 aa10.15□□□□□ -0.78
CACNA1A-239ENST00000637297 FAM117BQ6P1L5 589 aa10.15□□□□□ -0.78
CACNA1A-239ENST00000637297 SASS6Q6UVJ0 657 aa10.15□□□□□ -0.78
CACNA1A-239ENST00000637297 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.15□□□□□ -0.78
CACNA1A-239ENST00000637297 DYMQ7RTS9 669 aa10.15□□□□□ -0.78
CACNA1A-239ENST00000637297 MYCT1Q8N699 235 aa10.15□□□□□ -0.78
CACNA1A-239ENST00000637297 ENGASEQ8NFI3 743 aa10.15□□□□□ -0.78
CACNA1A-239ENST00000637297 ADAM2Q99965 735 aa10.15□□□□□ -0.78
CACNA1A-239ENST00000637297 CUEDC2Q9H467 287 aa10.15□□□□□ -0.78
CACNA1A-239ENST00000637297 C17orf75Q9HAS0 396 aa10.15□□□□□ -0.78
CACNA1A-239ENST00000637297 KMT5AQ9NQR1 393 aa10.15□□□□□ -0.78
CACNA1A-239ENST00000637297 CHST12Q9NRB3 414 aa10.15□□□□□ -0.78
CACNA1A-239ENST00000637297 C1orf112Q9NSG2 853 aa10.15□□□□□ -0.78
CACNA1A-239ENST00000637297 KCNH3Q9ULD8 1083 aa10.15□□□□□ -0.78
CACNA1A-239ENST00000637297 ODF2LQ9ULJ1 636 aa10.15□□□□□ -0.78
CACNA1A-239ENST00000637297 PIN4Q9Y237 131 aaKnown RBP10.15□□□□□ -0.78
CACNA1A-239ENST00000637297 PCDHB7Q9Y5E2 793 aa10.15□□□□□ -0.78
CACNA1A-239ENST00000637297 TTC3P53804 2025 aa10.15□□□□□ -0.78
CACNA1A-239ENST00000637297 MYO9BQ13459 2157 aa10.14□□□□□ -0.79
CACNA1A-239ENST00000637297 TRIOBPQ9H2D6 2365 aa10.14□□□□□ -0.79
CACNA1A-239ENST00000637297 PTPRSQ13332 1948 aa10.14□□□□□ -0.79
CACNA1A-239ENST00000637297 A0A1B0GVL5 298 aa10.14□□□□□ -0.79
CACNA1A-239ENST00000637297 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.14□□□□□ -0.79
CACNA1A-239ENST00000637297 GRXCR1A8MXD5 290 aa10.14□□□□□ -0.79
CACNA1A-239ENST00000637297 H0YCG3 227 aa10.14□□□□□ -0.79
CACNA1A-239ENST00000637297 K7ERI5 159 aa10.14□□□□□ -0.79
CACNA1A-239ENST00000637297 TLL1O43897 1013 aa10.14□□□□□ -0.79
CACNA1A-239ENST00000637297 SKIP12755 728 aa10.14□□□□□ -0.79
CACNA1A-239ENST00000637297 IDEP14735 1019 aa10.14□□□□□ -0.79
CACNA1A-239ENST00000637297 AXLP30530 894 aa10.14□□□□□ -0.79
CACNA1A-239ENST00000637297 EFNA5P52803 228 aa10.14□□□□□ -0.79
CACNA1A-239ENST00000637297 DEFB103AP81534 67 aa10.14□□□□□ -0.79
CACNA1A-239ENST00000637297 SMAD3P84022 425 aaKnown RBP10.14□□□□□ -0.79
CACNA1A-239ENST00000637297 SNW1Q13573 536 aaKnown RBP10.14□□□□□ -0.79
CACNA1A-239ENST00000637297 RAB30Q15771 203 aa10.14□□□□□ -0.79
CACNA1A-239ENST00000637297 MAPK6Q16659 721 aa10.14□□□□□ -0.79
CACNA1A-239ENST00000637297 UVSSAQ2YD98 709 aa10.14□□□□□ -0.79
CACNA1A-239ENST00000637297 ARSHQ5FYA8 562 aa10.14□□□□□ -0.79
CACNA1A-239ENST00000637297 TWF2Q6IBS0 349 aaKnown RBP10.14□□□□□ -0.79
CACNA1A-239ENST00000637297 RBM43Q6ZSC3 357 aaKnown RBP10.14□□□□□ -0.79
CACNA1A-239ENST00000637297 SLC24A5Q71RS6 500 aa10.14□□□□□ -0.79
CACNA1A-239ENST00000637297 IFNLR1Q8IU57 520 aaPredicted RBP10.14□□□□□ -0.79
CACNA1A-239ENST00000637297 HERC6Q8IVU3 1022 aa10.14□□□□□ -0.79
CACNA1A-239ENST00000637297 FMR1NBQ8N0W7 255 aaPredicted RBP10.14□□□□□ -0.79
CACNA1A-239ENST00000637297 RNF214Q8ND24 703 aa10.14□□□□□ -0.79
CACNA1A-239ENST00000637297 DDX12PQ92771 950 aa10.14□□□□□ -0.79
CACNA1A-239ENST00000637297 TOP1MTQ969P6 601 aa10.14□□□□□ -0.79
CACNA1A-239ENST00000637297 CCDC34Q96HJ3 373 aa10.14□□□□□ -0.79
CACNA1A-239ENST00000637297 REEP2Q9BRK0 252 aa10.14□□□□□ -0.79
CACNA1A-239ENST00000637297 NFKBIZQ9BYH8 718 aa10.14□□□□□ -0.79
CACNA1A-239ENST00000637297 TSPYL2Q9H2G4 693 aaPredicted RBP10.14□□□□□ -0.79
CACNA1A-239ENST00000637297 TMX1Q9H3N1 280 aa10.14□□□□□ -0.79
CACNA1A-239ENST00000637297 RGS18Q9NS28 235 aa10.14□□□□□ -0.79
CACNA1A-239ENST00000637297 PRMT7Q9NVM4 692 aaPredicted RBP10.14□□□□□ -0.79
CACNA1A-239ENST00000637297 PHLPP2Q6ZVD8 1323 aa10.13□□□□□ -0.79
CACNA1A-239ENST00000637297 A0A087X0B3 334 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms