RNA–Protein interactions for RNA: ENST00000637053.1

VIM-210, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 508 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-210ENST00000637053 PPP1R13LQ8WUF5 828 aa3.39□□□□□ -1.87
VIM-210ENST00000637053 ZNF606Q8WXB4 792 aa3.39□□□□□ -1.87
VIM-210ENST00000637053 TRIM63Q969Q1 353 aa3.39□□□□□ -1.87
VIM-210ENST00000637053 CLIP3Q96DZ5 547 aa3.39□□□□□ -1.87
VIM-210ENST00000637053 C1orf74Q96LT6 269 aa3.39□□□□□ -1.87
VIM-210ENST00000637053 RMDN2Q96LZ7 410 aa3.39□□□□□ -1.87
VIM-210ENST00000637053 NEK1Q96PY6 1258 aa3.39□□□□□ -1.87
VIM-210ENST00000637053 ASB2Q96Q27 587 aa3.39□□□□□ -1.87
VIM-210ENST00000637053 SEC62Q99442 399 aaKnown RBP3.39□□□□□ -1.87
VIM-210ENST00000637053 DPH2Q9BQC3 489 aaPredicted RBP3.39□□□□□ -1.87
VIM-210ENST00000637053 ADPGKQ9BRR6 497 aa3.39□□□□□ -1.87
VIM-210ENST00000637053 TCHPQ9BT92 498 aa3.39□□□□□ -1.87
VIM-210ENST00000637053 G6PC3Q9BUM1 346 aa3.39□□□□□ -1.87
VIM-210ENST00000637053 MENTQ9BUN1 341 aa3.39□□□□□ -1.87
VIM-210ENST00000637053 LSM14BQ9BX40 385 aaKnown RBP3.39□□□□□ -1.87
VIM-210ENST00000637053 TEX13AQ9BXU3 409 aaPredicted RBP3.39□□□□□ -1.87
VIM-210ENST00000637053 SLC7A5P2Q9GIP4 190 aa3.39□□□□□ -1.87
VIM-210ENST00000637053 IQCGQ9H095 443 aaKnown RBP3.39□□□□□ -1.87
VIM-210ENST00000637053 PUS7LQ9H0K6 701 aaKnown RBP3.39□□□□□ -1.87
VIM-210ENST00000637053 ANLNQ9NQW6 1124 aa3.39□□□□□ -1.87
VIM-210ENST00000637053 STARD7Q9NQZ5 370 aa3.39□□□□□ -1.87
VIM-210ENST00000637053 ABCF3Q9NUQ8 709 aa3.39□□□□□ -1.87
VIM-210ENST00000637053 ACTR10Q9NZ32 417 aa3.39□□□□□ -1.87
VIM-210ENST00000637053 POGKQ9P215 609 aa3.39□□□□□ -1.87
VIM-210ENST00000637053 ZMYM5Q9UJ78 669 aa3.39□□□□□ -1.87
VIM-210ENST00000637053 AGTPBP1Q9UPW5 1226 aa3.39□□□□□ -1.87
VIM-210ENST00000637053 CRYL1Q9Y2S2 319 aa3.39□□□□□ -1.87
VIM-210ENST00000637053 RRP7AQ9Y3A4 280 aaKnown RBP3.39□□□□□ -1.87
VIM-210ENST00000637053 C2CD2Q9Y426 696 aa3.39□□□□□ -1.87
VIM-210ENST00000637053 MTF2Q9Y483 593 aaPredicted RBP3.39□□□□□ -1.87
VIM-210ENST00000637053 KIF16BQ96L93 1317 aa3.39□□□□□ -1.87
VIM-210ENST00000637053 FFAR3O14843 346 aa3.38□□□□□ -1.87
VIM-210ENST00000637053 CASQ2O14958 399 aaPredicted RBP3.38□□□□□ -1.87
VIM-210ENST00000637053 P4HA2O15460 535 aa3.38□□□□□ -1.87
VIM-210ENST00000637053 FRS3O43559 492 aa3.38□□□□□ -1.87
VIM-210ENST00000637053 BRINP1O60477 761 aa3.38□□□□□ -1.87
VIM-210ENST00000637053 NEMFO60524 1076 aa3.38□□□□□ -1.87
VIM-210ENST00000637053 PPFIA2O75334 1257 aa3.38□□□□□ -1.87
VIM-210ENST00000637053 FBXO24O75426 580 aa3.38□□□□□ -1.87
VIM-210ENST00000637053 USP2O75604 605 aaPredicted RBP3.38□□□□□ -1.87
VIM-210ENST00000637053 FBXO21O94952 628 aa3.38□□□□□ -1.87
VIM-210ENST00000637053 SLPIP03973 132 aa3.38□□□□□ -1.87
VIM-210ENST00000637053 PF4V1P10720 104 aa3.38□□□□□ -1.87
VIM-210ENST00000637053 GZMAP12544 262 aa3.38□□□□□ -1.87
VIM-210ENST00000637053 STMN1P16949 149 aa3.38□□□□□ -1.87
VIM-210ENST00000637053 LPOP22079 712 aaPredicted RBP3.38□□□□□ -1.87
VIM-210ENST00000637053 STAT1P42224 750 aa3.38□□□□□ -1.87
VIM-210ENST00000637053 MAGEA10P43363 369 aaPredicted RBP3.38□□□□□ -1.87
VIM-210ENST00000637053 TM4SF4P48230 202 aa3.38□□□□□ -1.87
VIM-210ENST00000637053 MXI1P50539 228 aa3.38□□□□□ -1.87
VIM-210ENST00000637053 EVCP57679 992 aa3.38□□□□□ -1.87
VIM-210ENST00000637053 ETF1P62495 437 aaKnown RBP3.38□□□□□ -1.87
VIM-210ENST00000637053 YBX1P67809 324 aaKnown RBP3.38□□□□□ -1.87
VIM-210ENST00000637053 ADAM17P78536 824 aa3.38□□□□□ -1.87
VIM-210ENST00000637053 TEKQ02763 1124 aa3.38□□□□□ -1.87
VIM-210ENST00000637053 NSUN2Q08J23 767 aaKnown RBP eCLIP3.38□□□□□ -1.87
VIM-210ENST00000637053 STAT4Q14765 748 aa3.38□□□□□ -1.87
VIM-210ENST00000637053 TAF7Q15545 349 aaPredicted RBP3.38□□□□□ -1.87
VIM-210ENST00000637053 PTPN21Q16825 1174 aa3.38□□□□□ -1.87
VIM-210ENST00000637053 FILIP1LQ4L180 1135 aa3.38□□□□□ -1.87
VIM-210ENST00000637053 SETMARQ53H47 684 aaPredicted RBP3.38□□□□□ -1.87
VIM-210ENST00000637053 MUM1L1Q5H9M0 696 aa3.38□□□□□ -1.87
VIM-210ENST00000637053 SYDE2Q5VT97 1194 aa3.38□□□□□ -1.87
VIM-210ENST00000637053 PCNX4Q63HM2 1172 aa3.38□□□□□ -1.87
VIM-210ENST00000637053 TLDC1Q6P9B6 456 aa3.38□□□□□ -1.87
VIM-210ENST00000637053 CNSTQ6PJW8 725 aa3.38□□□□□ -1.87
VIM-210ENST00000637053 SYNE3Q6ZMZ3 975 aa3.38□□□□□ -1.87
VIM-210ENST00000637053 CCDC81Q6ZN84 652 aa3.38□□□□□ -1.87
VIM-210ENST00000637053 MFSD6Q6ZSS7 791 aa3.38□□□□□ -1.87
VIM-210ENST00000637053 SAPCD2Q86UD0 394 aa3.38□□□□□ -1.87
VIM-210ENST00000637053 SPATS2Q86XZ4 545 aaKnown RBP3.38□□□□□ -1.87
VIM-210ENST00000637053 SPPL2CQ8IUH8 684 aa3.38□□□□□ -1.87
VIM-210ENST00000637053 RNF168Q8IYW5 571 aaPredicted RBP3.38□□□□□ -1.87
VIM-210ENST00000637053 MYCT1Q8N699 235 aa3.38□□□□□ -1.87
VIM-210ENST00000637053 CNTD1Q8N815 330 aa3.38□□□□□ -1.87
VIM-210ENST00000637053 DRAXINQ8NBI3 349 aaPredicted RBP3.38□□□□□ -1.87
VIM-210ENST00000637053 KIAA1524Q8TCG1 905 aa3.38□□□□□ -1.87
VIM-210ENST00000637053 RTF1Q92541 710 aaKnown RBP3.38□□□□□ -1.87
VIM-210ENST00000637053 NACC2Q96BF6 587 aa3.38□□□□□ -1.87
VIM-210ENST00000637053 RADILQ96JH8 1075 aa3.38□□□□□ -1.87
VIM-210ENST00000637053 CNDP2Q96KP4 475 aaKnown RBP3.38□□□□□ -1.87
VIM-210ENST00000637053 SGCZQ96LD1 299 aa3.38□□□□□ -1.87
VIM-210ENST00000637053 PWWP2AQ96N64 755 aa3.38□□□□□ -1.87
VIM-210ENST00000637053 MPHOSPH8Q99549 860 aa3.38□□□□□ -1.87
VIM-210ENST00000637053 KIF2CQ99661 725 aa3.38□□□□□ -1.87
VIM-210ENST00000637053 C7orf25Q9BPX7 421 aa3.38□□□□□ -1.87
VIM-210ENST00000637053 CHCHD6Q9BRQ6 235 aa3.38□□□□□ -1.87
VIM-210ENST00000637053 SLC39A3Q9BRY0 314 aa3.38□□□□□ -1.87
VIM-210ENST00000637053 DESI2Q9BSY9 194 aa3.38□□□□□ -1.87
VIM-210ENST00000637053 ALG1Q9BT22 464 aa3.38□□□□□ -1.87
VIM-210ENST00000637053 KRTAP3-1Q9BYR8 98 aa3.38□□□□□ -1.87
VIM-210ENST00000637053 OSBPL7Q9BZF2 842 aa3.38□□□□□ -1.87
VIM-210ENST00000637053 GPR62Q9BZJ7 368 aa3.38□□□□□ -1.87
VIM-210ENST00000637053 MYLK2Q9H1R3 596 aa3.38□□□□□ -1.87
VIM-210ENST00000637053 KCTD10Q9H3F6 313 aa3.38□□□□□ -1.87
VIM-210ENST00000637053 RSAD1Q9HA92 442 aa3.38□□□□□ -1.87
VIM-210ENST00000637053 XPO5Q9HAV4 1204 aaKnown RBP eCLIP3.38□□□□□ -1.87
VIM-210ENST00000637053 AGO4Q9HCK5 861 aaKnown RBP3.38□□□□□ -1.87
VIM-210ENST00000637053 ZNF304Q9HCX3 659 aa3.38□□□□□ -1.87
VIM-210ENST00000637053 TCF7L2Q9NQB0 619 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms