RNA–Protein interactions for RNA: ENST00000637004.1

CACNA1A-235, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 2,829 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-235ENST00000637004 RPL21P46778 160 aaKnown RBP16.78■□□□□ 0.28
CACNA1A-235ENST00000637004 CACNB1Q02641 598 aaPredicted RBP16.78■□□□□ 0.28
CACNA1A-235ENST00000637004 EXOC3L1Q86VI1 746 aa16.78■□□□□ 0.28
CACNA1A-235ENST00000637004 DBR1Q9UK59 544 aaKnown RBP16.78■□□□□ 0.28
CACNA1A-235ENST00000637004 NPHP3-ACAD11A0A0J9YXS1 232 aa16.78■□□□□ 0.28
CACNA1A-235ENST00000637004 EVI5O60447 810 aa16.78■□□□□ 0.28
CACNA1A-235ENST00000637004 KLRK1P26718 216 aa16.78■□□□□ 0.28
CACNA1A-235ENST00000637004 MKRN3Q13064 507 aaKnown RBP16.78■□□□□ 0.28
CACNA1A-235ENST00000637004 ZNF211Q13398 564 aaPredicted RBP16.78■□□□□ 0.28
CACNA1A-235ENST00000637004 BIRC2Q13490 618 aa16.78■□□□□ 0.28
CACNA1A-235ENST00000637004 TAF11Q15544 211 aa16.78■□□□□ 0.28
CACNA1A-235ENST00000637004 NEDD1Q8NHV4 660 aa16.78■□□□□ 0.28
CACNA1A-235ENST00000637004 UHMK1Q8TAS1 419 aaKnown RBP16.78■□□□□ 0.28
CACNA1A-235ENST00000637004 LNX1Q8TBB1 728 aaPredicted RBP16.78■□□□□ 0.28
CACNA1A-235ENST00000637004 SH3RF3Q8TEJ3 882 aaPredicted RBP16.78■□□□□ 0.28
CACNA1A-235ENST00000637004 PDXKO00764 312 aa16.77■□□□□ 0.28
CACNA1A-235ENST00000637004 HIP1RO75146 1068 aa16.77■□□□□ 0.28
CACNA1A-235ENST00000637004 VCAM1P19320 739 aa16.77■□□□□ 0.28
CACNA1A-235ENST00000637004 FGFR4P22455 802 aa16.77■□□□□ 0.28
CACNA1A-235ENST00000637004 GLYCTKQ8IVS8 523 aa16.77■□□□□ 0.28
CACNA1A-235ENST00000637004 C18orf8Q96DM3 657 aa16.77■□□□□ 0.28
CACNA1A-235ENST00000637004 UBA5Q9GZZ9 404 aa16.77■□□□□ 0.28
CACNA1A-235ENST00000637004 A6NHS1 94 aa16.77■□□□□ 0.27
CACNA1A-235ENST00000637004 A8MUI8 341 aa16.77■□□□□ 0.27
CACNA1A-235ENST00000637004 MIF4GDA9UHW6 222 aaKnown RBP16.77■□□□□ 0.27
CACNA1A-235ENST00000637004 SLC16A3O15427 465 aaKnown RBP16.77■□□□□ 0.27
CACNA1A-235ENST00000637004 ABCB4P21439 1286 aa16.77■□□□□ 0.27
CACNA1A-235ENST00000637004 SOX5P35711 763 aa16.77■□□□□ 0.27
CACNA1A-235ENST00000637004 LMNB2Q03252 620 aa16.77■□□□□ 0.27
CACNA1A-235ENST00000637004 TRMT10CQ7L0Y3 403 aaKnown RBP16.77■□□□□ 0.27
CACNA1A-235ENST00000637004 UBL4BQ8N7F7 174 aa16.77■□□□□ 0.27
CACNA1A-235ENST00000637004 COA7Q96BR5 231 aa16.77■□□□□ 0.27
CACNA1A-235ENST00000637004 NAF1Q96HR8 494 aaKnown RBP16.77■□□□□ 0.27
CACNA1A-235ENST00000637004 ZFATQ9P243 1243 aa16.77■□□□□ 0.27
CACNA1A-235ENST00000637004 KLHL14Q9P2G3 628 aa16.77■□□□□ 0.27
CACNA1A-235ENST00000637004 PPP1R1BQ9UD71 204 aaPredicted RBP16.77■□□□□ 0.27
CACNA1A-235ENST00000637004 AJAP1Q9UKB5 411 aaPredicted RBP16.77■□□□□ 0.27
CACNA1A-235ENST00000637004 ZNF652Q9Y2D9 606 aa16.77■□□□□ 0.27
CACNA1A-235ENST00000637004 CNTNAP4Q9C0A0 1308 aa16.76■□□□□ 0.27
CACNA1A-235ENST00000637004 TMEM120BA0PK00 339 aa16.76■□□□□ 0.27
CACNA1A-235ENST00000637004 GGPS1O95749 300 aa16.76■□□□□ 0.27
CACNA1A-235ENST00000637004 LRRC14Q15048 493 aa16.76■□□□□ 0.27
CACNA1A-235ENST00000637004 RBBP5Q15291 538 aaKnown RBP16.76■□□□□ 0.27
CACNA1A-235ENST00000637004 DIXDC1Q155Q3 683 aa16.76■□□□□ 0.27
CACNA1A-235ENST00000637004 CCDC38Q502W7 563 aa16.76■□□□□ 0.27
CACNA1A-235ENST00000637004 FITM2Q8N6M3 262 aa16.76■□□□□ 0.27
CACNA1A-235ENST00000637004 MGARPQ8TDB4 240 aa16.76■□□□□ 0.27
CACNA1A-235ENST00000637004 ARHGEF2Q92974 986 aaKnown RBP16.76■□□□□ 0.27
CACNA1A-235ENST00000637004 SERPINB12Q96P63 405 aa16.76■□□□□ 0.27
CACNA1A-235ENST00000637004 NAP1L4Q99733 375 aaKnown RBP16.76■□□□□ 0.27
CACNA1A-235ENST00000637004 KIF13BQ9NQT8 1826 aa16.76■□□□□ 0.27
CACNA1A-235ENST00000637004 AKAP3O75969 853 aa16.76■□□□□ 0.27
CACNA1A-235ENST00000637004 CCNB1P14635 433 aa16.76■□□□□ 0.27
CACNA1A-235ENST00000637004 CDC25CP30307 473 aa16.76■□□□□ 0.27
CACNA1A-235ENST00000637004 PDE6BP35913 854 aa16.76■□□□□ 0.27
CACNA1A-235ENST00000637004 FBF1Q8TES7 1133 aa16.76■□□□□ 0.27
CACNA1A-235ENST00000637004 ALG3Q92685 438 aa16.76■□□□□ 0.27
CACNA1A-235ENST00000637004 SLC35C1Q96A29 364 aa16.76■□□□□ 0.27
CACNA1A-235ENST00000637004 COL4A1P02462 1669 aa16.75■□□□□ 0.27
CACNA1A-235ENST00000637004 LAMB2P55268 1798 aa16.75■□□□□ 0.27
CACNA1A-235ENST00000637004 PPP1R18Q6NYC8 613 aa16.75■□□□□ 0.27
CACNA1A-235ENST00000637004 TGFBRAP1Q8WUH2 860 aa16.75■□□□□ 0.27
CACNA1A-235ENST00000637004 CKAP2Q8WWK9 683 aa16.75■□□□□ 0.27
CACNA1A-235ENST00000637004 USP40Q9NVE5 1235 aa16.75■□□□□ 0.27
CACNA1A-235ENST00000637004 PRKAG3Q9UGI9 489 aa16.75■□□□□ 0.27
CACNA1A-235ENST00000637004 LY75O60449 1722 aa16.75■□□□□ 0.27
CACNA1A-235ENST00000637004 POTEB3A0JP26 581 aa16.75■□□□□ 0.27
CACNA1A-235ENST00000637004 KLHL33A6NCF5 533 aa16.75■□□□□ 0.27
CACNA1A-235ENST00000637004 ENO4A6NNW6 628 aa16.75■□□□□ 0.27
CACNA1A-235ENST00000637004 POTECB2RU33 542 aa16.75■□□□□ 0.27
CACNA1A-235ENST00000637004 E7ENQ6 273 aa16.75■□□□□ 0.27
CACNA1A-235ENST00000637004 LDHBP07195 334 aaKnown RBP16.75■□□□□ 0.27
CACNA1A-235ENST00000637004 GSTO1P78417 241 aa16.75■□□□□ 0.27
CACNA1A-235ENST00000637004 CCDC15Q0P6D6 951 aa16.75■□□□□ 0.27
CACNA1A-235ENST00000637004 RNF43Q68DV7 783 aa16.75■□□□□ 0.27
CACNA1A-235ENST00000637004 POTEBQ6S5H4 581 aa16.75■□□□□ 0.27
CACNA1A-235ENST00000637004 CYFIP1Q7L576 1253 aa16.75■□□□□ 0.27
CACNA1A-235ENST00000637004 RHOT2Q8IXI1 618 aa16.75■□□□□ 0.27
CACNA1A-235ENST00000637004 PRELID2Q8N945 189 aa16.75■□□□□ 0.27
CACNA1A-235ENST00000637004 ART4Q93070 314 aa16.75■□□□□ 0.27
CACNA1A-235ENST00000637004 OSBPL1AQ9BXW6 950 aa16.75■□□□□ 0.27
CACNA1A-235ENST00000637004 STK33Q9BYT3 514 aa16.75■□□□□ 0.27
CACNA1A-235ENST00000637004 ANKRD2Q9GZV1 360 aa16.75■□□□□ 0.27
CACNA1A-235ENST00000637004 PNMA3Q9UL41 463 aa16.75■□□□□ 0.27
CACNA1A-235ENST00000637004 EME2A4GXA9 379 aaPredicted RBP16.74■□□□□ 0.27
CACNA1A-235ENST00000637004 ANKRD62A6NC57 917 aa16.74■□□□□ 0.27
CACNA1A-235ENST00000637004 USP17L5A8MUK1 530 aa16.74■□□□□ 0.27
CACNA1A-235ENST00000637004 NR3C1P04150 777 aa16.74■□□□□ 0.27
CACNA1A-235ENST00000637004 CTNNA2P26232 953 aa16.74■□□□□ 0.27
CACNA1A-235ENST00000637004 CDK8P49336 464 aa16.74■□□□□ 0.27
CACNA1A-235ENST00000637004 CASP5P51878 434 aa16.74■□□□□ 0.27
CACNA1A-235ENST00000637004 RC3H1Q5TC82 1133 aaKnown RBP16.74■□□□□ 0.27
CACNA1A-235ENST00000637004 GJB7Q6PEY0 223 aa16.74■□□□□ 0.27
CACNA1A-235ENST00000637004 CCDC137Q6PK04 289 aaKnown RBP16.74■□□□□ 0.27
CACNA1A-235ENST00000637004 CELF1Q92879 486 aaKnown RBP16.74■□□□□ 0.27
CACNA1A-235ENST00000637004 GRAMD1AQ96CP6 724 aa16.74■□□□□ 0.27
CACNA1A-235ENST00000637004 YIPF3Q9GZM5 350 aa16.74■□□□□ 0.27
CACNA1A-235ENST00000637004 DHX36Q9H2U1 1008 aaKnown RBP16.74■□□□□ 0.27
CACNA1A-235ENST00000637004 TXLNGQ9NUQ3 528 aa16.74■□□□□ 0.27
CACNA1A-235ENST00000637004 TYW1Q9NV66 732 aaKnown RBP16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms