RNA–Protein interactions for RNA: ENST00000636674.1

CLN6-215, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 2,005 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-215ENST00000636674 CYP2W1Q8TAV3 490 aa15.74■□□□□ 0.11
CLN6-215ENST00000636674 TMEM174Q8WUU8 243 aa15.74■□□□□ 0.11
CLN6-215ENST00000636674 MAGOHBQ96A72 148 aaKnown RBP15.74■□□□□ 0.11
CLN6-215ENST00000636674 ARHGEF26Q96DR7 871 aa15.74■□□□□ 0.11
CLN6-215ENST00000636674 PGM2Q96G03 612 aa15.74■□□□□ 0.11
CLN6-215ENST00000636674 STRA6Q9BX79 667 aa15.74■□□□□ 0.11
CLN6-215ENST00000636674 FHDC1Q9C0D6 1143 aaPredicted RBP15.74■□□□□ 0.11
CLN6-215ENST00000636674 FRMD4BQ9Y2L6 1034 aa15.74■□□□□ 0.11
CLN6-215ENST00000636674 COL2A1P02458 1487 aaPredicted RBP15.74■□□□□ 0.11
CLN6-215ENST00000636674 FAM196BA6NMK8 535 aa15.73■□□□□ 0.11
CLN6-215ENST00000636674 RASSF9O75901 435 aa15.73■□□□□ 0.11
CLN6-215ENST00000636674 BMP3P12645 472 aa15.73■□□□□ 0.11
CLN6-215ENST00000636674 COL11A2P13942 1736 aaPredicted RBP15.73■□□□□ 0.11
CLN6-215ENST00000636674 TMOD1P28289 359 aa15.73■□□□□ 0.11
CLN6-215ENST00000636674 ZNF76P36508 570 aa15.73■□□□□ 0.11
CLN6-215ENST00000636674 MAPK7Q13164 816 aa15.73■□□□□ 0.11
CLN6-215ENST00000636674 CTTNQ14247 550 aaKnown RBP15.73■□□□□ 0.11
CLN6-215ENST00000636674 ZC2HC1CQ53FD0 456 aaPredicted RBP15.73■□□□□ 0.11
CLN6-215ENST00000636674 ODF2Q5BJF6 829 aa15.73■□□□□ 0.11
CLN6-215ENST00000636674 RNF187Q5TA31 235 aaPredicted RBP15.73■□□□□ 0.11
CLN6-215ENST00000636674 ATRNL1Q5VV63 1379 aa15.73■□□□□ 0.11
CLN6-215ENST00000636674 CCDC121Q6ZUS5 278 aa15.73■□□□□ 0.11
CLN6-215ENST00000636674 PIGOQ8TEQ8 1089 aa15.73■□□□□ 0.11
CLN6-215ENST00000636674 WDR18Q9BV38 432 aa15.73■□□□□ 0.11
CLN6-215ENST00000636674 RASAL2Q9UJF2 1139 aa15.73■□□□□ 0.11
CLN6-215ENST00000636674 SFI1A8K8P3 1242 aa15.73■□□□□ 0.11
CLN6-215ENST00000636674 PHF2O75151 1096 aa15.73■□□□□ 0.11
CLN6-215ENST00000636674 TNFAIP3P21580 790 aa15.73■□□□□ 0.11
CLN6-215ENST00000636674 PRELPP51888 382 aa15.73■□□□□ 0.11
CLN6-215ENST00000636674 SNAP25P60880 206 aa15.73■□□□□ 0.11
CLN6-215ENST00000636674 BFSP1Q12934 665 aa15.73■□□□□ 0.11
CLN6-215ENST00000636674 BYSLQ13895 437 aaKnown RBP15.73■□□□□ 0.11
CLN6-215ENST00000636674 QPCTQ16769 361 aa15.73■□□□□ 0.11
CLN6-215ENST00000636674 LACTB2Q53H82 288 aaPredicted RBP15.73■□□□□ 0.11
CLN6-215ENST00000636674 LRCH2Q5VUJ6 765 aa15.73■□□□□ 0.11
CLN6-215ENST00000636674 CROCCP2Q86T23 111 aa15.73■□□□□ 0.11
CLN6-215ENST00000636674 JAMLQ86YT9 394 aa15.73■□□□□ 0.11
CLN6-215ENST00000636674 FAM178BQ8IXR5 827 aa15.73■□□□□ 0.11
CLN6-215ENST00000636674 NLGN1Q8N2Q7 840 aa15.73■□□□□ 0.11
CLN6-215ENST00000636674 LMO3Q8TAP4 145 aa15.73■□□□□ 0.11
CLN6-215ENST00000636674 NEK9Q8TD19 979 aa15.73■□□□□ 0.11
CLN6-215ENST00000636674 DYDC2Q96IM9 177 aa15.73■□□□□ 0.11
CLN6-215ENST00000636674 SEC16BQ96JE7 1060 aa15.73■□□□□ 0.11
CLN6-215ENST00000636674 THAP2Q9H0W7 228 aa15.73■□□□□ 0.11
CLN6-215ENST00000636674 IKZF4Q9H2S9 585 aa15.73■□□□□ 0.11
CLN6-215ENST00000636674 PABPC3Q9H361 631 aaKnown RBP15.73■□□□□ 0.11
CLN6-215ENST00000636674 ERVK-5Q9HDB9 667 aa15.73■□□□□ 0.11
CLN6-215ENST00000636674 BCCIPQ9P287 314 aaKnown RBP eCLIP15.73■□□□□ 0.11
CLN6-215ENST00000636674 COG5Q9UP83 839 aa15.73■□□□□ 0.11
CLN6-215ENST00000636674 DCDC2CA8MYV0 355 aa15.72■□□□□ 0.11
CLN6-215ENST00000636674 KIAA0391O15091 583 aaKnown RBP15.72■□□□□ 0.11
CLN6-215ENST00000636674 GGPS1O95749 300 aa15.72■□□□□ 0.11
CLN6-215ENST00000636674 ABCB4P21439 1286 aa15.72■□□□□ 0.11
CLN6-215ENST00000636674 HOXA13P31271 388 aaPredicted RBP15.72■□□□□ 0.11
CLN6-215ENST00000636674 SETQ01105 290 aaPredicted RBP15.72■□□□□ 0.11
CLN6-215ENST00000636674 IFFO1Q0D2I5 559 aa15.72■□□□□ 0.11
CLN6-215ENST00000636674 COG2Q14746 738 aa15.72■□□□□ 0.11
CLN6-215ENST00000636674 DOK7Q18PE1 504 aa15.72■□□□□ 0.11
CLN6-215ENST00000636674 ABCB5Q2M3G0 1257 aa15.72■□□□□ 0.11
CLN6-215ENST00000636674 KIAA1755Q5JYT7 1200 aa15.72■□□□□ 0.11
CLN6-215ENST00000636674 ERMARDQ5T6L9 678 aa15.72■□□□□ 0.11
CLN6-215ENST00000636674 ZDHHC24Q6UX98 284 aa15.72■□□□□ 0.11
CLN6-215ENST00000636674 CACNA2D3Q8IZS8 1091 aa15.72■□□□□ 0.11
CLN6-215ENST00000636674 ALG3Q92685 438 aa15.72■□□□□ 0.11
CLN6-215ENST00000636674 SYT17Q9BSW7 474 aa15.72■□□□□ 0.11
CLN6-215ENST00000636674 KCNQ5Q9NR82 932 aa15.72■□□□□ 0.11
CLN6-215ENST00000636674 PCYOX1Q9UHG3 505 aa15.72■□□□□ 0.11
CLN6-215ENST00000636674 ATP8A1Q9Y2Q0 1164 aa15.72■□□□□ 0.11
CLN6-215ENST00000636674 GOLGA6L7A0A1B0GV03 622 aa15.72■□□□□ 0.11
CLN6-215ENST00000636674 TULP1O00294 542 aaPredicted RBP15.72■□□□□ 0.11
CLN6-215ENST00000636674 P4HA2O15460 535 aa15.72■□□□□ 0.11
CLN6-215ENST00000636674 MTA2O94776 668 aa15.72■□□□□ 0.11
CLN6-215ENST00000636674 DRD4P21917 467 aa15.72■□□□□ 0.11
CLN6-215ENST00000636674 CHRNA3P32297 505 aa15.72■□□□□ 0.11
CLN6-215ENST00000636674 PTGIRP43119 386 aa15.72■□□□□ 0.11
CLN6-215ENST00000636674 MNAT1P51948 309 aa15.72■□□□□ 0.11
CLN6-215ENST00000636674 PODNQ7Z5L7 613 aa15.72■□□□□ 0.11
CLN6-215ENST00000636674 NACC1Q96RE7 527 aa15.72■□□□□ 0.11
CLN6-215ENST00000636674 AGPAT1Q99943 283 aa15.72■□□□□ 0.11
CLN6-215ENST00000636674 TMEM109Q9BVC6 243 aa15.72■□□□□ 0.11
CLN6-215ENST00000636674 OSBPL7Q9BZF2 842 aa15.72■□□□□ 0.11
CLN6-215ENST00000636674 FAM129AQ9BZQ8 928 aa15.72■□□□□ 0.11
CLN6-215ENST00000636674 TAS2R14Q9NYV8 317 aa15.72■□□□□ 0.11
CLN6-215ENST00000636674 CNOT7Q9UIV1 285 aaKnown RBP15.72■□□□□ 0.11
CLN6-215ENST00000636674 SMCHD1A6NHR9 2005 aa15.71■□□□□ 0.11
CLN6-215ENST00000636674 TRIM49P0CI25 452 aa15.71■□□□□ 0.11
CLN6-215ENST00000636674 TRIM49CP0CI26 452 aa15.71■□□□□ 0.11
CLN6-215ENST00000636674 GHRP10912 638 aa15.71■□□□□ 0.11
CLN6-215ENST00000636674 BCRP11274 1271 aa15.71■□□□□ 0.11
CLN6-215ENST00000636674 CTNNA2P26232 953 aa15.71■□□□□ 0.11
CLN6-215ENST00000636674 PMS2P54278 862 aa15.71■□□□□ 0.11
CLN6-215ENST00000636674 ANKRD20A8PQ5CZ79 823 aa15.71■□□□□ 0.11
CLN6-215ENST00000636674 GKAP1Q5VSY0 366 aaPredicted RBP15.71■□□□□ 0.11
CLN6-215ENST00000636674 PHLDB3Q6NSJ2 640 aa15.71■□□□□ 0.11
CLN6-215ENST00000636674 B3GNT9Q6UX72 402 aa15.71■□□□□ 0.11
CLN6-215ENST00000636674 PALB2Q86YC2 1186 aa15.71■□□□□ 0.11
CLN6-215ENST00000636674 TPH2Q8IWU9 490 aa15.71■□□□□ 0.11
CLN6-215ENST00000636674 MORC4Q8TE76 937 aa15.71■□□□□ 0.11
CLN6-215ENST00000636674 XPO6Q96QU8 1125 aaKnown RBP15.71■□□□□ 0.11
CLN6-215ENST00000636674 RPS6KC1Q96S38 1066 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms