RNA–Protein interactions for RNA: ENST00000636022.1

CACNA1A-222, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 3

Gene CACNA1A, Length 552 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-222ENST00000636022 JAK2O60674 1132 aa8.19□□□□□ -1.1
CACNA1A-222ENST00000636022 DKC1O60832 514 aaKnown RBP eCLIP8.19□□□□□ -1.1
CACNA1A-222ENST00000636022 ZNF623O75123 536 aa8.19□□□□□ -1.1
CACNA1A-222ENST00000636022 SLITRK3O94933 977 aa8.19□□□□□ -1.1
CACNA1A-222ENST00000636022 SFPQP23246 707 aaKnown RBP eCLIP8.19□□□□□ -1.1
CACNA1A-222ENST00000636022 PPM1AP35813 382 aa8.19□□□□□ -1.1
CACNA1A-222ENST00000636022 KRT2P35908 639 aa8.19□□□□□ -1.1
CACNA1A-222ENST00000636022 RFC5P40937 340 aa8.19□□□□□ -1.1
CACNA1A-222ENST00000636022 ST3GAL1Q11201 340 aa8.19□□□□□ -1.1
CACNA1A-222ENST00000636022 TMEM184AQ6ZMB5 413 aa8.19□□□□□ -1.1
CACNA1A-222ENST00000636022 C4orf19Q8IY42 314 aa8.19□□□□□ -1.1
CACNA1A-222ENST00000636022 SLFN12Q8IYM2 578 aa8.19□□□□□ -1.1
CACNA1A-222ENST00000636022 ABI1Q8IZP0 508 aa8.19□□□□□ -1.1
CACNA1A-222ENST00000636022 SLC39A11Q8N1S5 342 aa8.19□□□□□ -1.1
CACNA1A-222ENST00000636022 MICAL1Q8TDZ2 1067 aa8.19□□□□□ -1.1
CACNA1A-222ENST00000636022 PRPF31Q8WWY3 499 aaKnown RBP8.19□□□□□ -1.1
CACNA1A-222ENST00000636022 SLC7A3Q8WY07 619 aa8.19□□□□□ -1.1
CACNA1A-222ENST00000636022 TMEM143Q96AN5 459 aa8.19□□□□□ -1.1
CACNA1A-222ENST00000636022 DYDC2Q96IM9 177 aa8.19□□□□□ -1.1
CACNA1A-222ENST00000636022 CEP170P1Q96L14 293 aa8.19□□□□□ -1.1
CACNA1A-222ENST00000636022 NLRP4Q96MN2 994 aa8.19□□□□□ -1.1
CACNA1A-222ENST00000636022 ZNF558Q96NG5 402 aa8.19□□□□□ -1.1
CACNA1A-222ENST00000636022 DCBLD2Q96PD2 775 aa8.19□□□□□ -1.1
CACNA1A-222ENST00000636022 POP1Q99575 1024 aaKnown RBP8.19□□□□□ -1.1
CACNA1A-222ENST00000636022 HSD17B14Q9BPX1 270 aa8.19□□□□□ -1.1
CACNA1A-222ENST00000636022 LXNQ9BS40 222 aa8.19□□□□□ -1.1
CACNA1A-222ENST00000636022 INO80BQ9C086 356 aaPredicted RBP8.19□□□□□ -1.1
CACNA1A-222ENST00000636022 MINDY3Q9H8M7 445 aa8.19□□□□□ -1.1
CACNA1A-222ENST00000636022 NGRNQ9NPE2 291 aaKnown RBP8.19□□□□□ -1.1
CACNA1A-222ENST00000636022 SPG21Q9NZD8 308 aa8.19□□□□□ -1.1
CACNA1A-222ENST00000636022 RGL1Q9NZL6 768 aa8.19□□□□□ -1.1
CACNA1A-222ENST00000636022 PUF60Q9UHX1 559 aaKnown RBP8.19□□□□□ -1.1
CACNA1A-222ENST00000636022 COL4A3BPQ9Y5P4 624 aa8.19□□□□□ -1.1
CACNA1A-222ENST00000636022 FSD2A1L4K1 749 aa8.18□□□□□ -1.1
CACNA1A-222ENST00000636022 PRR33A8MZF0 331 aa8.18□□□□□ -1.1
CACNA1A-222ENST00000636022 BTBD18B2RXH4 712 aa8.18□□□□□ -1.1
CACNA1A-222ENST00000636022 LOC730098B7Z3J9 87 aa8.18□□□□□ -1.1
CACNA1A-222ENST00000636022 OFD1O75665 1012 aa8.18□□□□□ -1.1
CACNA1A-222ENST00000636022 LYPLA2O95372 231 aa8.18□□□□□ -1.1
CACNA1A-222ENST00000636022 SKIP12755 728 aa8.18□□□□□ -1.1
CACNA1A-222ENST00000636022 HOXA11P31270 313 aaPredicted RBP8.18□□□□□ -1.1
CACNA1A-222ENST00000636022 YWHABP31946 246 aaKnown RBP8.18□□□□□ -1.1
CACNA1A-222ENST00000636022 PLA2G5P39877 138 aa8.18□□□□□ -1.1
CACNA1A-222ENST00000636022 NEK4P51957 841 aa8.18□□□□□ -1.1
CACNA1A-222ENST00000636022 BCAR1P56945 870 aa8.18□□□□□ -1.1
CACNA1A-222ENST00000636022 CYP4A11Q02928 519 aa8.18□□□□□ -1.1
CACNA1A-222ENST00000636022 KRT17Q04695 432 aa8.18□□□□□ -1.1
CACNA1A-222ENST00000636022 LAMTOR4Q0VGL1 99 aa8.18□□□□□ -1.1
CACNA1A-222ENST00000636022 CTTNQ14247 550 aaKnown RBP8.18□□□□□ -1.1
CACNA1A-222ENST00000636022 CBX2Q14781 532 aaPredicted RBP8.18□□□□□ -1.1
CACNA1A-222ENST00000636022 HERC4Q5GLZ8 1057 aaPredicted RBP8.18□□□□□ -1.1
CACNA1A-222ENST00000636022 UBXN11Q5T124 520 aa8.18□□□□□ -1.1
CACNA1A-222ENST00000636022 PLPP4Q5VZY2 271 aa8.18□□□□□ -1.1
CACNA1A-222ENST00000636022 TWF2Q6IBS0 349 aaKnown RBP8.18□□□□□ -1.1
CACNA1A-222ENST00000636022 NCAPH2Q6IBW4 605 aa8.18□□□□□ -1.1
CACNA1A-222ENST00000636022 SYCE2Q6PIF2 218 aa8.18□□□□□ -1.1
CACNA1A-222ENST00000636022 CATSPER4Q7RTX7 472 aa8.18□□□□□ -1.1
CACNA1A-222ENST00000636022 MRPL10Q7Z7H8 261 aaKnown RBP8.18□□□□□ -1.1
CACNA1A-222ENST00000636022 TMEM173Q86WV6 379 aaPredicted RBP8.18□□□□□ -1.1
CACNA1A-222ENST00000636022 RNF135Q8IUD6 432 aa8.18□□□□□ -1.1
CACNA1A-222ENST00000636022 EXOC8Q8IYI6 725 aa8.18□□□□□ -1.1
CACNA1A-222ENST00000636022 PSPC1Q8WXF1 523 aaKnown RBP8.18□□□□□ -1.1
CACNA1A-222ENST00000636022 RSPH1Q8WYR4 309 aa8.18□□□□□ -1.1
CACNA1A-222ENST00000636022 SUSD6Q92537 303 aa8.18□□□□□ -1.1
CACNA1A-222ENST00000636022 LPPQ93052 612 aa8.18□□□□□ -1.1
CACNA1A-222ENST00000636022 MTMR9Q96QG7 549 aa8.18□□□□□ -1.1
CACNA1A-222ENST00000636022 TCF25Q9BQ70 676 aa8.18□□□□□ -1.1
CACNA1A-222ENST00000636022 MRPL9Q9BYD2 267 aaKnown RBP8.18□□□□□ -1.1
CACNA1A-222ENST00000636022 S1PR5Q9H228 398 aa8.18□□□□□ -1.1
CACNA1A-222ENST00000636022 ZSWIM4Q9H7M6 989 aa8.18□□□□□ -1.1
CACNA1A-222ENST00000636022 XPNPEP1Q9NQW7 623 aa8.18□□□□□ -1.1
CACNA1A-222ENST00000636022 AGPAT5Q9NUQ2 364 aa8.18□□□□□ -1.1
CACNA1A-222ENST00000636022 FAM105AQ9NUU6 356 aa8.18□□□□□ -1.1
CACNA1A-222ENST00000636022 PIN4Q9Y237 131 aaKnown RBP8.18□□□□□ -1.1
CACNA1A-222ENST00000636022 USP15Q9Y4E8 981 aaPredicted RBP8.18□□□□□ -1.1
CACNA1A-222ENST00000636022 MYO10Q9HD67 2058 aa8.18□□□□□ -1.1
CACNA1A-222ENST00000636022 ZFHX2Q9C0A1 2572 aaPredicted RBP8.17□□□□□ -1.1
CACNA1A-222ENST00000636022 C2orf71A6NGG8 1288 aa8.17□□□□□ -1.1
CACNA1A-222ENST00000636022 NT5C1B-RDH14C9J2C7 533 aa8.17□□□□□ -1.1
CACNA1A-222ENST00000636022 ASAP2O43150 1006 aa8.17□□□□□ -1.1
CACNA1A-222ENST00000636022 GAS2O43903 313 aaKnown RBP8.17□□□□□ -1.1
CACNA1A-222ENST00000636022 MARCH6O60337 910 aa8.17□□□□□ -1.1
CACNA1A-222ENST00000636022 B4GALT3O60512 393 aa8.17□□□□□ -1.1
CACNA1A-222ENST00000636022 EIF5BO60841 1220 aaKnown RBP8.17□□□□□ -1.1
CACNA1A-222ENST00000636022 BAG4O95429 457 aaKnown RBP8.17□□□□□ -1.1
CACNA1A-222ENST00000636022 SRGAP2CP0DJJ0 459 aa8.17□□□□□ -1.1
CACNA1A-222ENST00000636022 ALDH7A1P49419 539 aaKnown RBP8.17□□□□□ -1.1
CACNA1A-222ENST00000636022 RAB27AP51159 221 aa8.17□□□□□ -1.1
CACNA1A-222ENST00000636022 AFF1P51825 1210 aaKnown RBP8.17□□□□□ -1.1
CACNA1A-222ENST00000636022 POLGP54098 1239 aaPredicted RBP8.17□□□□□ -1.1
CACNA1A-222ENST00000636022 EMC2Q15006 297 aa8.17□□□□□ -1.1
CACNA1A-222ENST00000636022 CALCRLQ16602 461 aa8.17□□□□□ -1.1
CACNA1A-222ENST00000636022 LONRF3Q496Y0 759 aa8.17□□□□□ -1.1
CACNA1A-222ENST00000636022 XKR9Q5GH70 373 aa8.17□□□□□ -1.1
CACNA1A-222ENST00000636022 AGMOQ6ZNB7 445 aa8.17□□□□□ -1.1
CACNA1A-222ENST00000636022 OTUD6AQ7L8S5 288 aa8.17□□□□□ -1.1
CACNA1A-222ENST00000636022 TMC7Q7Z402 723 aa8.17□□□□□ -1.1
CACNA1A-222ENST00000636022 SRGAP1Q7Z6B7 1085 aa8.17□□□□□ -1.1
CACNA1A-222ENST00000636022 FERMT3Q86UX7 667 aa8.17□□□□□ -1.1
CACNA1A-222ENST00000636022 TPH2Q8IWU9 490 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms