RNA–Protein interactions for RNA: ENST00000634934.2

LINC00339-208, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,518 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-208ENST00000634934 KCNG1Q9UIX4 513 aa15.91■□□□□ 0.14
LINC00339-208ENST00000634934 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.91■□□□□ 0.14
LINC00339-208ENST00000634934 EVPLQ92817 2033 aa15.91■□□□□ 0.14
LINC00339-208ENST00000634934 A0A087WZ62 844 aa15.9■□□□□ 0.14
LINC00339-208ENST00000634934 GOLGA6L6A8MZA4 724 aa15.9■□□□□ 0.14
LINC00339-208ENST00000634934 M0QZ92 97 aa15.9■□□□□ 0.14
LINC00339-208ENST00000634934 GCNT3O95395 438 aa15.9■□□□□ 0.14
LINC00339-208ENST00000634934 ADCY5O95622 1261 aa15.9■□□□□ 0.14
LINC00339-208ENST00000634934 RPLP2P05387 115 aaKnown RBP15.9■□□□□ 0.14
LINC00339-208ENST00000634934 PTMAP06454 111 aaKnown RBP15.9■□□□□ 0.14
LINC00339-208ENST00000634934 SYN1P17600 705 aa15.9■□□□□ 0.14
LINC00339-208ENST00000634934 MRPS6P82932 125 aaKnown RBP15.9■□□□□ 0.14
LINC00339-208ENST00000634934 CDC42EP1Q00587 391 aa15.9■□□□□ 0.14
LINC00339-208ENST00000634934 STK4Q13043 487 aa15.9■□□□□ 0.14
LINC00339-208ENST00000634934 PSMD2Q13200 908 aa15.9■□□□□ 0.14
LINC00339-208ENST00000634934 TOX2Q96NM4 488 aa15.9■□□□□ 0.14
LINC00339-208ENST00000634934 FDXACB1Q9BRP7 624 aaPredicted RBP15.9■□□□□ 0.14
LINC00339-208ENST00000634934 FGFBP2Q9BYJ0 223 aa15.9■□□□□ 0.14
LINC00339-208ENST00000634934 OLFML3Q9NRN5 406 aa15.9■□□□□ 0.14
LINC00339-208ENST00000634934 GDAQ9Y2T3 454 aa15.9■□□□□ 0.14
LINC00339-208ENST00000634934 H0YGN5 161 aa15.89■□□□□ 0.13
LINC00339-208ENST00000634934 MYBP10242 640 aa15.89■□□□□ 0.13
LINC00339-208ENST00000634934 GTF2F1P35269 517 aaKnown RBP eCLIP15.89■□□□□ 0.13
LINC00339-208ENST00000634934 PHKA2P46019 1235 aa15.89■□□□□ 0.13
LINC00339-208ENST00000634934 MORC3Q14149 939 aa15.89■□□□□ 0.13
LINC00339-208ENST00000634934 TRIM71Q2Q1W2 868 aaKnown RBP15.89■□□□□ 0.13
LINC00339-208ENST00000634934 GLIPR1L2Q4G1C9 344 aa15.89■□□□□ 0.13
LINC00339-208ENST00000634934 ZNF658Q5TYW1 1059 aaPredicted RBP15.89■□□□□ 0.13
LINC00339-208ENST00000634934 ZNF720Q7Z2F6 126 aa15.89■□□□□ 0.13
LINC00339-208ENST00000634934 HAUS6Q7Z4H7 955 aa15.89■□□□□ 0.13
LINC00339-208ENST00000634934 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.89■□□□□ 0.13
LINC00339-208ENST00000634934 ZBTB8OSQ8IWT0 167 aa15.89■□□□□ 0.13
LINC00339-208ENST00000634934 SMYD4Q8IYR2 804 aaPredicted RBP15.89■□□□□ 0.13
LINC00339-208ENST00000634934 CCDC155Q8N6L0 562 aa15.89■□□□□ 0.13
LINC00339-208ENST00000634934 TRIML1Q8N9V2 468 aa15.89■□□□□ 0.13
LINC00339-208ENST00000634934 GLIS3Q8NEA6 775 aa15.89■□□□□ 0.13
LINC00339-208ENST00000634934 FIZ1Q96SL8 496 aa15.89■□□□□ 0.13
LINC00339-208ENST00000634934 OSMRQ99650 979 aa15.89■□□□□ 0.13
LINC00339-208ENST00000634934 NTPCRQ9BSD7 190 aaKnown RBP15.89■□□□□ 0.13
LINC00339-208ENST00000634934 ADAMTS10Q9H324 1103 aa15.89■□□□□ 0.13
LINC00339-208ENST00000634934 CDHR5Q9HBB8 845 aa15.89■□□□□ 0.13
LINC00339-208ENST00000634934 ZMYND8Q9ULU4 1186 aaPredicted RBP15.89■□□□□ 0.13
LINC00339-208ENST00000634934 ADGRA3Q8IWK6 1321 aa15.89■□□□□ 0.13
LINC00339-208ENST00000634934 RANBP2P49792 3224 aaKnown RBP15.89■□□□□ 0.13
LINC00339-208ENST00000634934 DENND3A2RUS2 1198 aa15.89■□□□□ 0.13
LINC00339-208ENST00000634934 H0YCG3 227 aa15.89■□□□□ 0.13
LINC00339-208ENST00000634934 GPR32O75388 356 aa15.89■□□□□ 0.13
LINC00339-208ENST00000634934 MAPTP10636 758 aaKnown RBP15.89■□□□□ 0.13
LINC00339-208ENST00000634934 CASP5P51878 434 aa15.89■□□□□ 0.13
LINC00339-208ENST00000634934 NCKAP1LP55160 1127 aa15.89■□□□□ 0.13
LINC00339-208ENST00000634934 FAAP100Q0VG06 881 aa15.89■□□□□ 0.13
LINC00339-208ENST00000634934 ZC2HC1CQ53FD0 456 aaPredicted RBP15.89■□□□□ 0.13
LINC00339-208ENST00000634934 RPAINQ86UA6 219 aa15.89■□□□□ 0.13
LINC00339-208ENST00000634934 ZNF410Q86VK4 478 aa15.89■□□□□ 0.13
LINC00339-208ENST00000634934 KIAA0895Q8NCT3 520 aa15.89■□□□□ 0.13
LINC00339-208ENST00000634934 SLC17A8Q8NDX2 589 aa15.89■□□□□ 0.13
LINC00339-208ENST00000634934 TMEM161BQ8NDZ6 487 aa15.89■□□□□ 0.13
LINC00339-208ENST00000634934 CELF4Q9BZC1 486 aaKnown RBP15.89■□□□□ 0.13
LINC00339-208ENST00000634934 GCOM2Q9BZD3 368 aaPredicted RBP15.89■□□□□ 0.13
LINC00339-208ENST00000634934 MAPK8IP1Q9UQF2 711 aa15.89■□□□□ 0.13
LINC00339-208ENST00000634934 PCDHB13Q9Y5F0 798 aa15.89■□□□□ 0.13
LINC00339-208ENST00000634934 TRPV2Q9Y5S1 764 aa15.89■□□□□ 0.13
LINC00339-208ENST00000634934 CDY2AQ9Y6F7 541 aa15.89■□□□□ 0.13
LINC00339-208ENST00000634934 INO80B-WBP1J3KQ70 363 aa15.88■□□□□ 0.13
LINC00339-208ENST00000634934 CSDE1O75534 798 aaKnown RBP15.88■□□□□ 0.13
LINC00339-208ENST00000634934 CKBP12277 381 aa15.88■□□□□ 0.13
LINC00339-208ENST00000634934 BMP6P22004 513 aa15.88■□□□□ 0.13
LINC00339-208ENST00000634934 NLRP12P59046 1061 aa15.88■□□□□ 0.13
LINC00339-208ENST00000634934 PTENP60484 403 aa15.88■□□□□ 0.13
LINC00339-208ENST00000634934 BFSP2Q13515 415 aa15.88■□□□□ 0.13
LINC00339-208ENST00000634934 ZNF618Q5T7W0 954 aa15.88■□□□□ 0.13
LINC00339-208ENST00000634934 STXBP4Q6ZWJ1 553 aa15.88■□□□□ 0.13
LINC00339-208ENST00000634934 ZNF710Q8N1W2 664 aa15.88■□□□□ 0.13
LINC00339-208ENST00000634934 CAGE1Q8TC20 777 aa15.88■□□□□ 0.13
LINC00339-208ENST00000634934 GTPBP4Q9BZE4 634 aaKnown RBP15.88■□□□□ 0.13
LINC00339-208ENST00000634934 INO80BQ9C086 356 aaPredicted RBP15.88■□□□□ 0.13
LINC00339-208ENST00000634934 C2orf40Q9H1Z8 148 aa15.88■□□□□ 0.13
LINC00339-208ENST00000634934 IFT122Q9HBG6 1241 aa15.88■□□□□ 0.13
LINC00339-208ENST00000634934 PRDM5Q9NQX1 630 aaPredicted RBP15.88■□□□□ 0.13
LINC00339-208ENST00000634934 TMEM39AQ9NV64 488 aa15.88■□□□□ 0.13
LINC00339-208ENST00000634934 ARHGAP28Q9P2N2 729 aa15.88■□□□□ 0.13
LINC00339-208ENST00000634934 LTBP2Q14767 1821 aa15.87■□□□□ 0.13
LINC00339-208ENST00000634934 K7ERI5 159 aa15.87■□□□□ 0.13
LINC00339-208ENST00000634934 CAND2O75155 1236 aa15.87■□□□□ 0.13
LINC00339-208ENST00000634934 PRPF6O94906 941 aaKnown RBP15.87■□□□□ 0.13
LINC00339-208ENST00000634934 CHRNA1P02708 482 aa15.87■□□□□ 0.13
LINC00339-208ENST00000634934 CLTBP09497 229 aa15.87■□□□□ 0.13
LINC00339-208ENST00000634934 EFNA5P52803 228 aa15.87■□□□□ 0.13
LINC00339-208ENST00000634934 CRYBB1P53674 252 aaPredicted RBP15.87■□□□□ 0.13
LINC00339-208ENST00000634934 POU5F1BQ06416 359 aa15.87■□□□□ 0.13
LINC00339-208ENST00000634934 TYRO3Q06418 890 aa15.87■□□□□ 0.13
LINC00339-208ENST00000634934 CDCA2Q69YH5 1023 aaPredicted RBP15.87■□□□□ 0.13
LINC00339-208ENST00000634934 MYOCDQ8IZQ8 938 aa15.87■□□□□ 0.13
LINC00339-208ENST00000634934 HIPK3Q9H422 1215 aa15.87■□□□□ 0.13
LINC00339-208ENST00000634934 MYH11P35749 1972 aa15.87■□□□□ 0.13
LINC00339-208ENST00000634934 TRIM43BA6NCK2 446 aa15.86■□□□□ 0.13
LINC00339-208ENST00000634934 DARSP14868 501 aaKnown RBP15.86■□□□□ 0.13
LINC00339-208ENST00000634934 GTF2BQ00403 316 aa15.86■□□□□ 0.13
LINC00339-208ENST00000634934 MBTD1Q05BQ5 628 aa15.86■□□□□ 0.13
LINC00339-208ENST00000634934 MGAT3Q09327 533 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms