RNA–Protein interactions for RNA: ENST00000628729.2

PDCD6-214, Transcript of programmed cell death 6, humanhuman

TSL 5 BASIC

Gene PDCD6, Length 1,073 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6-214ENST00000628729 TMEM143Q96AN5 459 aa18.55■□□□□ 0.56
PDCD6-214ENST00000628729 DYDC2Q96IM9 177 aa18.55■□□□□ 0.56
PDCD6-214ENST00000628729 CDCA3Q99618 268 aaPredicted RBP18.55■□□□□ 0.56
PDCD6-214ENST00000628729 S1PR5Q9H228 398 aa18.55■□□□□ 0.56
PDCD6-214ENST00000628729 CHST12Q9NRB3 414 aa18.55■□□□□ 0.56
PDCD6-214ENST00000628729 AGPAT5Q9NUQ2 364 aa18.55■□□□□ 0.56
PDCD6-214ENST00000628729 FAM105AQ9NUU6 356 aa18.55■□□□□ 0.56
PDCD6-214ENST00000628729 ARIH1Q9Y4X5 557 aaPredicted RBP18.55■□□□□ 0.56
PDCD6-214ENST00000628729 COL4A3BPQ9Y5P4 624 aa18.55■□□□□ 0.56
PDCD6-214ENST00000628729 CYP4A11Q02928 519 aa18.54■□□□□ 0.56
PDCD6-214ENST00000628729 CTTNQ14247 550 aaKnown RBP18.54■□□□□ 0.56
PDCD6-214ENST00000628729 EPHA7Q15375 998 aa18.54■□□□□ 0.56
PDCD6-214ENST00000628729 NCAPH2Q6IBW4 605 aa18.54■□□□□ 0.56
PDCD6-214ENST00000628729 HFE2Q6ZVN8 426 aa18.54■□□□□ 0.56
PDCD6-214ENST00000628729 CATSPER4Q7RTX7 472 aa18.54■□□□□ 0.56
PDCD6-214ENST00000628729 C4orf19Q8IY42 314 aa18.54■□□□□ 0.56
PDCD6-214ENST00000628729 CEP170P1Q96L14 293 aa18.54■□□□□ 0.56
PDCD6-214ENST00000628729 APOL5Q9BWW9 433 aa18.54■□□□□ 0.56
PDCD6-214ENST00000628729 TBC1D13Q9NVG8 400 aa18.54■□□□□ 0.56
PDCD6-214ENST00000628729 C2orf71A6NGG8 1288 aa18.53■□□□□ 0.56
PDCD6-214ENST00000628729 ZC3H11AO75152 810 aaKnown RBP eCLIP18.53■□□□□ 0.562e-12■■■■□ 21.5
PDCD6-214ENST00000628729 SEC24BO95487 1268 aa18.53■□□□□ 0.56
PDCD6-214ENST00000628729 XBP1P17861 261 aa18.53■□□□□ 0.56
PDCD6-214ENST00000628729 HOXA11P31270 313 aaPredicted RBP18.53■□□□□ 0.56
PDCD6-214ENST00000628729 YWHABP31946 246 aaKnown RBP18.53■□□□□ 0.56
PDCD6-214ENST00000628729 KRT2P35908 639 aa18.53■□□□□ 0.56
PDCD6-214ENST00000628729 AFF1P51825 1210 aaKnown RBP18.53■□□□□ 0.56
PDCD6-214ENST00000628729 FOSBP53539 338 aa18.53■□□□□ 0.56
PDCD6-214ENST00000628729 POLGP54098 1239 aaPredicted RBP18.53■□□□□ 0.56
PDCD6-214ENST00000628729 CDC42EP1Q00587 391 aa18.53■□□□□ 0.56
PDCD6-214ENST00000628729 EMC2Q15006 297 aa18.53■□□□□ 0.56
PDCD6-214ENST00000628729 UBXN11Q5T124 520 aa18.53■□□□□ 0.56
PDCD6-214ENST00000628729 ANKRD54Q6NXT1 300 aa18.53■□□□□ 0.56
PDCD6-214ENST00000628729 AGMOQ6ZNB7 445 aa18.53■□□□□ 0.56
PDCD6-214ENST00000628729 PRPF31Q8WWY3 499 aaKnown RBP18.53■□□□□ 0.56
PDCD6-214ENST00000628729 AUTS2Q8WXX7 1259 aa18.53■□□□□ 0.56
PDCD6-214ENST00000628729 SLC7A3Q8WY07 619 aa18.53■□□□□ 0.56
PDCD6-214ENST00000628729 VN1R3Q9BXE9 311 aa18.53■□□□□ 0.56
PDCD6-214ENST00000628729 MRPL9Q9BYD2 267 aaKnown RBP18.53■□□□□ 0.56
PDCD6-214ENST00000628729 NRDE2Q9H7Z3 1164 aa18.53■□□□□ 0.56
PDCD6-214ENST00000628729 NGRNQ9NPE2 291 aaKnown RBP18.53■□□□□ 0.56
PDCD6-214ENST00000628729 XPNPEP1Q9NQW7 623 aa18.53■□□□□ 0.56
PDCD6-214ENST00000628729 PPP4R2Q9NY27 417 aa18.53■□□□□ 0.56
PDCD6-214ENST00000628729 DNAJB4Q9UDY4 337 aa18.53■□□□□ 0.56
PDCD6-214ENST00000628729 ZNF623O75123 536 aa18.52■□□□□ 0.56
PDCD6-214ENST00000628729 OFD1O75665 1012 aa18.52■□□□□ 0.56
PDCD6-214ENST00000628729 TECP42680 631 aa18.52■□□□□ 0.56
PDCD6-214ENST00000628729 LAMTOR4Q0VGL1 99 aa18.52■□□□□ 0.56
PDCD6-214ENST00000628729 ANKRD1Q15327 319 aa18.52■□□□□ 0.56
PDCD6-214ENST00000628729 TMC7Q7Z402 723 aa18.52■□□□□ 0.56
PDCD6-214ENST00000628729 FEZF2Q8TBJ5 459 aa18.52■□□□□ 0.56
PDCD6-214ENST00000628729 PSPC1Q8WXF1 523 aaKnown RBP18.52■□□□□ 0.56
PDCD6-214ENST00000628729 PHF7Q9BWX1 381 aaPredicted RBP18.52■□□□□ 0.56
PDCD6-214ENST00000628729 ZBP1Q9H171 429 aa18.52■□□□□ 0.56
PDCD6-214ENST00000628729 PUF60Q9UHX1 559 aaKnown RBP18.52■□□□□ 0.56
PDCD6-214ENST00000628729 INPP5FQ9Y2H2 1132 aa18.52■□□□□ 0.56
PDCD6-214ENST00000628729 HCFC2Q9Y5Z7 792 aa18.52■□□□□ 0.56
PDCD6-214ENST00000628729 KMT2EQ8IZD2 1858 aa18.52■□□□□ 0.55
PDCD6-214ENST00000628729 FSD2A1L4K1 749 aa18.51■□□□□ 0.55
PDCD6-214ENST00000628729 BTBD18B2RXH4 712 aa18.51■□□□□ 0.55
PDCD6-214ENST00000628729 SLITRK3O94933 977 aa18.51■□□□□ 0.55
PDCD6-214ENST00000628729 SRGAP2CP0DJJ0 459 aa18.51■□□□□ 0.55
PDCD6-214ENST00000628729 RFC5P40937 340 aa18.51■□□□□ 0.55
PDCD6-214ENST00000628729 KRT17Q04695 432 aa18.51■□□□□ 0.55
PDCD6-214ENST00000628729 SMC1AQ14683 1233 aaKnown RBP18.51■□□□□ 0.55
PDCD6-214ENST00000628729 NOMO2Q5JPE7 1267 aa18.51■□□□□ 0.55
PDCD6-214ENST00000628729 ZNF280BQ86YH2 543 aa18.51■□□□□ 0.55
PDCD6-214ENST00000628729 MRPL43Q8N983 215 aaKnown RBP18.51■□□□□ 0.55
PDCD6-214ENST00000628729 RPGRIP1Q96KN7 1286 aa18.51■□□□□ 0.55
PDCD6-214ENST00000628729 JPH2Q9BR39 696 aaPredicted RBP18.51■□□□□ 0.55
PDCD6-214ENST00000628729 INO80BQ9C086 356 aaPredicted RBP18.51■□□□□ 0.55
PDCD6-214ENST00000628729 PCDHB2Q9Y5E7 798 aa18.51■□□□□ 0.55
PDCD6-214ENST00000628729 DENND4AQ7Z401 1863 aa18.51■□□□□ 0.55
PDCD6-214ENST00000628729 DKC1O60832 514 aaKnown RBP eCLIP18.5■□□□□ 0.551e-7■■■■■ 36.5
PDCD6-214ENST00000628729 CLASP2O75122 1294 aaKnown RBP18.5■□□□□ 0.55
PDCD6-214ENST00000628729 SLC11A1P49279 550 aa18.5■□□□□ 0.55
PDCD6-214ENST00000628729 RAB27AP51159 221 aa18.5■□□□□ 0.55
PDCD6-214ENST00000628729 XKR9Q5GH70 373 aa18.5■□□□□ 0.55
PDCD6-214ENST00000628729 GLB1LQ6UWU2 654 aa18.5■□□□□ 0.55
PDCD6-214ENST00000628729 FERMT3Q86UX7 667 aa18.5■□□□□ 0.55
PDCD6-214ENST00000628729 DIS3L2Q8IYB7 885 aaKnown RBP18.5■□□□□ 0.55
PDCD6-214ENST00000628729 SLFN12Q8IYM2 578 aa18.5■□□□□ 0.55
PDCD6-214ENST00000628729 RNF149Q8NC42 400 aa18.5■□□□□ 0.55
PDCD6-214ENST00000628729 WASF1Q92558 559 aa18.5■□□□□ 0.55
PDCD6-214ENST00000628729 EDAQ92838 391 aa18.5■□□□□ 0.55
PDCD6-214ENST00000628729 IGSF21Q96ID5 467 aa18.5■□□□□ 0.55
PDCD6-214ENST00000628729 NAP1L4Q99733 375 aaKnown RBP18.5■□□□□ 0.55
PDCD6-214ENST00000628729 HSD17B14Q9BPX1 270 aa18.5■□□□□ 0.55
PDCD6-214ENST00000628729 EIF2AK1Q9BQI3 630 aaKnown RBP18.5■□□□□ 0.55
PDCD6-214ENST00000628729 ZSWIM4Q9H7M6 989 aa18.5■□□□□ 0.55
PDCD6-214ENST00000628729 PPME1Q9Y570 386 aa18.5■□□□□ 0.55
PDCD6-214ENST00000628729 DDHD2O94830 711 aa18.49■□□□□ 0.55
PDCD6-214ENST00000628729 GALTP07902 379 aa18.49■□□□□ 0.55
PDCD6-214ENST00000628729 SP100P23497 879 aaPredicted RBP18.49■□□□□ 0.55
PDCD6-214ENST00000628729 ALDH7A1P49419 539 aaKnown RBP18.49■□□□□ 0.55
PDCD6-214ENST00000628729 SRGAP1Q7Z6B7 1085 aa18.49■□□□□ 0.55
PDCD6-214ENST00000628729 MRPL10Q7Z7H8 261 aaKnown RBP18.49■□□□□ 0.55
PDCD6-214ENST00000628729 VPS52Q8N1B4 723 aa18.49■□□□□ 0.55
PDCD6-214ENST00000628729 TMEM169Q96HH4 297 aa18.49■□□□□ 0.55
PDCD6-214ENST00000628729 GBP3Q9H0R5 595 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms