RNA–Protein interactions for RNA: ENST00000625849.2

TCF4-250, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-250ENST00000625849 DNAI1Q9UI46 699 aa5.66□□□□□ -1.5
TCF4-250ENST00000625849 COL11A2P13942 1736 aaPredicted RBP5.65□□□□□ -1.5
TCF4-250ENST00000625849 MTSS1O43312 755 aa5.65□□□□□ -1.5
TCF4-250ENST00000625849 HKR1P10072 659 aa5.65□□□□□ -1.5
TCF4-250ENST00000625849 PTTG1IPP53801 180 aa5.65□□□□□ -1.5
TCF4-250ENST00000625849 FAM214AQ32MH5 1076 aa5.65□□□□□ -1.5
TCF4-250ENST00000625849 SMG7Q92540 1137 aaKnown RBP5.65□□□□□ -1.5
TCF4-250ENST00000625849 CELF4Q9BZC1 486 aaKnown RBP5.65□□□□□ -1.5
TCF4-250ENST00000625849 RNF7Q9UBF6 113 aa5.65□□□□□ -1.5
TCF4-250ENST00000625849 COQ6Q9Y2Z9 468 aa5.65□□□□□ -1.5
TCF4-250ENST00000625849 RNASET2O00584 256 aaKnown RBP5.64□□□□□ -1.51
TCF4-250ENST00000625849 APPP05067 770 aa5.64□□□□□ -1.51
TCF4-250ENST00000625849 VPS72Q15906 364 aa5.64□□□□□ -1.51
TCF4-250ENST00000625849 FAM209AQ5JX71 171 aa5.64□□□□□ -1.51
TCF4-250ENST00000625849 SLFN12LQ6IEE8 588 aa5.64□□□□□ -1.51
TCF4-250ENST00000625849 CC2D1AQ6P1N0 951 aaPredicted RBP5.64□□□□□ -1.51
TCF4-250ENST00000625849 BMP8AQ7Z5Y6 402 aa5.64□□□□□ -1.51
TCF4-250ENST00000625849 LILRA3Q8N6C8 439 aaPredicted RBP5.64□□□□□ -1.51
TCF4-250ENST00000625849 SCARB1Q8WTV0 552 aa5.64□□□□□ -1.51
TCF4-250ENST00000625849 PDCD2LQ9BRP1 358 aa5.64□□□□□ -1.51
TCF4-250ENST00000625849 NDC1Q9BTX1 674 aa5.64□□□□□ -1.51
TCF4-250ENST00000625849 AKIP1Q9NQ31 210 aa5.64□□□□□ -1.51
TCF4-250ENST00000625849 TRPM5Q9NZQ8 1165 aa5.64□□□□□ -1.51
TCF4-250ENST00000625849 GAGE12BA1L429 117 aa5.63□□□□□ -1.51
TCF4-250ENST00000625849 GAGE12HA6NDE8 117 aa5.63□□□□□ -1.51
TCF4-250ENST00000625849 KLF4O43474 513 aa5.63□□□□□ -1.51
TCF4-250ENST00000625849 ADCY3O60266 1144 aa5.63□□□□□ -1.51
TCF4-250ENST00000625849 HNRNPLP14866 589 aaKnown RBP eCLIP5.63□□□□□ -1.51
TCF4-250ENST00000625849 APOBEC3AP31941 199 aaPredicted RBP5.63□□□□□ -1.51
TCF4-250ENST00000625849 IRF9Q00978 393 aa5.63□□□□□ -1.51
TCF4-250ENST00000625849 FOXI1Q12951 378 aa5.63□□□□□ -1.51
TCF4-250ENST00000625849 OVCH1Q7RTY7 1134 aa5.63□□□□□ -1.51
TCF4-250ENST00000625849 GDF7Q7Z4P5 450 aa5.63□□□□□ -1.51
TCF4-250ENST00000625849 MCF2L2Q86YR7 1114 aa5.63□□□□□ -1.51
TCF4-250ENST00000625849 GLB1L3Q8NCI6 653 aaPredicted RBP5.63□□□□□ -1.51
TCF4-250ENST00000625849 MAML3Q96JK9 1138 aa5.63□□□□□ -1.51
TCF4-250ENST00000625849 DCLRE1CQ96SD1 692 aaKnown RBP5.63□□□□□ -1.51
TCF4-250ENST00000625849 HAPLN2Q9GZV7 340 aa5.63□□□□□ -1.51
TCF4-250ENST00000625849 HOXA3O43365 443 aaPredicted RBP5.62□□□□□ -1.51
TCF4-250ENST00000625849 NCR1O76036 304 aa5.62□□□□□ -1.51
TCF4-250ENST00000625849 FNTBP49356 437 aa5.62□□□□□ -1.51
TCF4-250ENST00000625849 ARID5AQ03989 594 aa5.62□□□□□ -1.51
TCF4-250ENST00000625849 FOXF2Q12947 444 aa5.62□□□□□ -1.51
TCF4-250ENST00000625849 FOXB2Q5VYV0 432 aa5.62□□□□□ -1.51
TCF4-250ENST00000625849 OR52N2Q8NGI0 321 aa5.62□□□□□ -1.51
TCF4-250ENST00000625849 CPEB1Q9BZB8 566 aaKnown RBP5.62□□□□□ -1.51
TCF4-250ENST00000625849 EPC1Q9H2F5 836 aa5.62□□□□□ -1.51
TCF4-250ENST00000625849 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.62□□□□□ -1.51
TCF4-250ENST00000625849 NDUFA10O95299 355 aa5.61□□□□□ -1.51
TCF4-250ENST00000625849 POLR2AP24928 1970 aaKnown RBP5.61□□□□□ -1.51
TCF4-250ENST00000625849 BMPR1AP36894 532 aa5.61□□□□□ -1.51
TCF4-250ENST00000625849 SPATC1Q76KD6 591 aa5.61□□□□□ -1.51
TCF4-250ENST00000625849 FAM83AQ86UY5 434 aa5.61□□□□□ -1.51
TCF4-250ENST00000625849 SRRM1Q8IYB3 904 aaKnown RBP5.61□□□□□ -1.51
TCF4-250ENST00000625849 C9orf106Q8NAJ2 232 aa5.61□□□□□ -1.51
TCF4-250ENST00000625849 DKK2Q9UBU2 259 aa5.61□□□□□ -1.51
TCF4-250ENST00000625849 UBA6A0AVT1 1052 aaPredicted RBP5.6□□□□□ -1.51
TCF4-250ENST00000625849 PIPSLA2A3N6 862 aa5.6□□□□□ -1.51
TCF4-250ENST00000625849 NRP1O14786 923 aa5.6□□□□□ -1.51
TCF4-250ENST00000625849 IKBKBO14920 756 aa5.6□□□□□ -1.51
TCF4-250ENST00000625849 DNAJC6O75061 913 aa5.6□□□□□ -1.51
TCF4-250ENST00000625849 PLA2G5P39877 138 aa5.6□□□□□ -1.51
TCF4-250ENST00000625849 BLOC1S1P78537 153 aa5.6□□□□□ -1.51
TCF4-250ENST00000625849 GUCY1B3Q02153 619 aa5.6□□□□□ -1.51
TCF4-250ENST00000625849 MAPK7Q13164 816 aa5.6□□□□□ -1.51
TCF4-250ENST00000625849 BEAN1Q3B7T3 259 aa5.6□□□□□ -1.51
TCF4-250ENST00000625849 KRTAP5-11Q6L8G4 156 aa5.6□□□□□ -1.51
TCF4-250ENST00000625849 BRAPQ7Z569 592 aa5.6□□□□□ -1.51
TCF4-250ENST00000625849 C2orf69Q8N8R5 385 aa5.6□□□□□ -1.51
TCF4-250ENST00000625849 ZBTB38Q8NAP3 1195 aaPredicted RBP5.6□□□□□ -1.51
TCF4-250ENST00000625849 CAGE1Q8TC20 777 aa5.6□□□□□ -1.51
TCF4-250ENST00000625849 SLC9A6Q92581 669 aa5.6□□□□□ -1.51
TCF4-250ENST00000625849 UIMC1Q96RL1 719 aa5.6□□□□□ -1.51
TCF4-250ENST00000625849 TLK1Q9UKI8 766 aa5.6□□□□□ -1.51
TCF4-250ENST00000625849 SYNPO2Q9UMS6 1093 aa5.6□□□□□ -1.51
TCF4-250ENST00000625849 CHST2Q9Y4C5 530 aa5.6□□□□□ -1.51
TCF4-250ENST00000625849 DNAJC9-AS1A6NH13 148 aa5.59□□□□□ -1.51
TCF4-250ENST00000625849 ZBTB48P10074 688 aaPredicted RBP5.59□□□□□ -1.51
TCF4-250ENST00000625849 ERCC5P28715 1186 aaPredicted RBP5.59□□□□□ -1.51
TCF4-250ENST00000625849 BCAR1P56945 870 aa5.59□□□□□ -1.51
TCF4-250ENST00000625849 TTC38Q5R3I4 469 aa5.59□□□□□ -1.51
TCF4-250ENST00000625849 PRAMEF9Q5VWM5 478 aa5.59□□□□□ -1.51
TCF4-250ENST00000625849 PLXDC1Q8IUK5 500 aa5.59□□□□□ -1.51
TCF4-250ENST00000625849 ANKS1AQ92625 1134 aa5.59□□□□□ -1.51
TCF4-250ENST00000625849 RPGRQ92834 1020 aaKnown RBP5.59□□□□□ -1.51
TCF4-250ENST00000625849 EXOC2Q96KP1 924 aa5.59□□□□□ -1.51
TCF4-250ENST00000625849 BOCQ9BWV1 1114 aa5.59□□□□□ -1.51
TCF4-250ENST00000625849 KRTAP1-5Q9BYS1 174 aa5.59□□□□□ -1.51
TCF4-250ENST00000625849 SLC29A3Q9BZD2 475 aa5.59□□□□□ -1.51
TCF4-250ENST00000625849 ENKD1Q9H0I2 346 aa5.59□□□□□ -1.51
TCF4-250ENST00000625849 KIAA1522Q9P206 1035 aaPredicted RBP5.59□□□□□ -1.51
TCF4-250ENST00000625849 COL3A1P02461 1466 aaPredicted RBP5.58□□□□□ -1.52
TCF4-250ENST00000625849 RBMXL2O75526 392 aaKnown RBP5.58□□□□□ -1.52
TCF4-250ENST00000625849 MFAP1P55081 439 aaKnown RBP5.58□□□□□ -1.52
TCF4-250ENST00000625849 NHLH1Q02575 133 aa5.58□□□□□ -1.52
TCF4-250ENST00000625849 ABHD17BQ5VST6 288 aa5.58□□□□□ -1.52
TCF4-250ENST00000625849 CPEB3Q8NE35 698 aaKnown RBP5.58□□□□□ -1.52
TCF4-250ENST00000625849 DHRS4Q9BTZ2 278 aa5.58□□□□□ -1.52
TCF4-250ENST00000625849 SLC52A2Q9HAB3 445 aa5.58□□□□□ -1.52
TCF4-250ENST00000625849 NDOR1Q9UHB4 597 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms