RNA–Protein interactions for RNA: ENST00000625716.2

TCF4-249, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 359 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-249ENST00000625716 STXBP5LQ9Y2K9 1186 aa7.23□□□□□ -1.25
TCF4-249ENST00000625716 TELO2Q9Y4R8 837 aa7.23□□□□□ -1.25
TCF4-249ENST00000625716 SAMM50Q9Y512 469 aa7.23□□□□□ -1.25
TCF4-249ENST00000625716 PCDHA11Q9Y5I1 949 aa7.23□□□□□ -1.25
TCF4-249ENST00000625716 STK36Q9NRP7 1315 aa7.23□□□□□ -1.25
TCF4-249ENST00000625716 IGLV3-22A0A075B6J6 115 aa7.22□□□□□ -1.25
TCF4-249ENST00000625716 ABHD14A-ACY1A0A1B0GW23 586 aa7.22□□□□□ -1.25
TCF4-249ENST00000625716 DCDC2BA2VCK2 349 aa7.22□□□□□ -1.25
TCF4-249ENST00000625716 POM121CA8CG34 1229 aa7.22□□□□□ -1.25
TCF4-249ENST00000625716 GAS7O60861 476 aa7.22□□□□□ -1.25
TCF4-249ENST00000625716 NBNO60934 754 aa7.22□□□□□ -1.25
TCF4-249ENST00000625716 ATG7O95352 703 aa7.22□□□□□ -1.25
TCF4-249ENST00000625716 CXCL10P02778 98 aa7.22□□□□□ -1.25
TCF4-249ENST00000625716 CTSHP09668 335 aa7.22□□□□□ -1.25
TCF4-249ENST00000625716 INSRRP14616 1297 aa7.22□□□□□ -1.25
TCF4-249ENST00000625716 FOSL2P15408 326 aa7.22□□□□□ -1.25
TCF4-249ENST00000625716 CD33P20138 364 aa7.22□□□□□ -1.25
TCF4-249ENST00000625716 HOXC8P31273 242 aa7.22□□□□□ -1.25
TCF4-249ENST00000625716 CIITAP33076 1130 aa7.22□□□□□ -1.25
TCF4-249ENST00000625716 TXLNAP40222 546 aa7.22□□□□□ -1.25
TCF4-249ENST00000625716 RABGGTBP53611 331 aa7.22□□□□□ -1.25
TCF4-249ENST00000625716 NCOA4Q13772 614 aa7.22□□□□□ -1.25
TCF4-249ENST00000625716 ME3Q16798 604 aa7.22□□□□□ -1.25
TCF4-249ENST00000625716 TRIM71Q2Q1W2 868 aaKnown RBP7.22□□□□□ -1.25
TCF4-249ENST00000625716 ARSJQ5FYB0 599 aaPredicted RBP7.22□□□□□ -1.25
TCF4-249ENST00000625716 ZNF746Q6NUN9 644 aaPredicted RBP7.22□□□□□ -1.25
TCF4-249ENST00000625716 SWSAP1Q6NVH7 229 aa7.22□□□□□ -1.25
TCF4-249ENST00000625716 ABHD15Q6UXT9 468 aa7.22□□□□□ -1.25
TCF4-249ENST00000625716 NECAB1Q8N987 351 aa7.22□□□□□ -1.25
TCF4-249ENST00000625716 DAGLBQ8NCG7 672 aa7.22□□□□□ -1.25
TCF4-249ENST00000625716 CRYGNQ8WXF5 182 aa7.22□□□□□ -1.25
TCF4-249ENST00000625716 GTF3C6Q969F1 213 aa7.22□□□□□ -1.25
TCF4-249ENST00000625716 IL17RAQ96F46 866 aa7.22□□□□□ -1.25
TCF4-249ENST00000625716 AIFM3Q96NN9 605 aa7.22□□□□□ -1.25
TCF4-249ENST00000625716 GUCD1Q96NT3 240 aa7.22□□□□□ -1.25
TCF4-249ENST00000625716 RIT2Q99578 217 aa7.22□□□□□ -1.25
TCF4-249ENST00000625716 NAP1L4Q99733 375 aaKnown RBP7.22□□□□□ -1.25
TCF4-249ENST00000625716 TEKT3Q9BXF9 490 aa7.22□□□□□ -1.25
TCF4-249ENST00000625716 NKX2-4Q9H2Z4 354 aa7.22□□□□□ -1.25
TCF4-249ENST00000625716 SCHIP1Q9P0W5 487 aaPredicted RBP7.22□□□□□ -1.25
TCF4-249ENST00000625716 KCNJ14Q9UNX9 436 aa7.22□□□□□ -1.25
TCF4-249ENST00000625716 LIMCH1Q9UPQ0 1083 aa7.22□□□□□ -1.25
TCF4-249ENST00000625716 PCDHA10Q9Y5I2 948 aa7.22□□□□□ -1.25
TCF4-249ENST00000625716 MYH7BA7E2Y1 1941 aa7.22□□□□□ -1.25
TCF4-249ENST00000625716 WDR64B1ANS9 1081 aa7.21□□□□□ -1.26
TCF4-249ENST00000625716 ADAMTS3O15072 1205 aa7.21□□□□□ -1.26
TCF4-249ENST00000625716 MSH4O15457 936 aa7.21□□□□□ -1.26
TCF4-249ENST00000625716 DHX15O43143 795 aaKnown RBP7.21□□□□□ -1.26
TCF4-249ENST00000625716 CHMP2AO43633 222 aa7.21□□□□□ -1.26
TCF4-249ENST00000625716 HBP1O60381 514 aa7.21□□□□□ -1.26
TCF4-249ENST00000625716 CCNE2O96020 404 aa7.21□□□□□ -1.26
TCF4-249ENST00000625716 AMHP03971 560 aa7.21□□□□□ -1.26
TCF4-249ENST00000625716 SFNP31947 248 aa7.21□□□□□ -1.26
TCF4-249ENST00000625716 KRT2P35908 639 aa7.21□□□□□ -1.26
TCF4-249ENST00000625716 JAK3P52333 1124 aa7.21□□□□□ -1.26
TCF4-249ENST00000625716 WDR5P61964 334 aaKnown RBP7.21□□□□□ -1.26
TCF4-249ENST00000625716 PLCB4Q15147 1175 aa7.21□□□□□ -1.26
TCF4-249ENST00000625716 INF2Q27J81 1249 aa7.21□□□□□ -1.26
TCF4-249ENST00000625716 LETM2Q2VYF4 491 aa7.21□□□□□ -1.26
TCF4-249ENST00000625716 EML3Q32P44 896 aa7.21□□□□□ -1.26
TCF4-249ENST00000625716 Q4G0T1 1027 aa7.21□□□□□ -1.26
TCF4-249ENST00000625716 ZNF484Q5JVG2 852 aa7.21□□□□□ -1.26
TCF4-249ENST00000625716 LRCH2Q5VUJ6 765 aa7.21□□□□□ -1.26
TCF4-249ENST00000625716 IER5Q5VY09 327 aa7.21□□□□□ -1.26
TCF4-249ENST00000625716 TRMT1LQ7Z2T5 733 aaKnown RBP7.21□□□□□ -1.26
TCF4-249ENST00000625716 HERC6Q8IVU3 1022 aa7.21□□□□□ -1.26
TCF4-249ENST00000625716 DEPDC4Q8N2C3 294 aa7.21□□□□□ -1.26
TCF4-249ENST00000625716 SLC17A8Q8NDX2 589 aa7.21□□□□□ -1.26
TCF4-249ENST00000625716 DBF4BQ8NFT6 615 aa7.21□□□□□ -1.26
TCF4-249ENST00000625716 DNAJB3Q8WWF6 145 aa7.21□□□□□ -1.26
TCF4-249ENST00000625716 MYLIPQ8WY64 445 aa7.21□□□□□ -1.26
TCF4-249ENST00000625716 APBB2Q92870 758 aa7.21□□□□□ -1.26
TCF4-249ENST00000625716 WNT8BQ93098 351 aa7.21□□□□□ -1.26
TCF4-249ENST00000625716 ZSCAN31Q96LW9 406 aaPredicted RBP7.21□□□□□ -1.26
TCF4-249ENST00000625716 PCYT2Q99447 389 aa7.21□□□□□ -1.26
TCF4-249ENST00000625716 PHF20Q9BVI0 1012 aa7.21□□□□□ -1.26
TCF4-249ENST00000625716 FAM49AQ9H0Q0 323 aaPredicted RBP7.21□□□□□ -1.26
TCF4-249ENST00000625716 TTYH1Q9H313 450 aaPredicted RBP7.21□□□□□ -1.26
TCF4-249ENST00000625716 NRBP2Q9NSY0 501 aa7.21□□□□□ -1.26
TCF4-249ENST00000625716 ZDHHC3Q9NYG2 299 aa7.21□□□□□ -1.26
TCF4-249ENST00000625716 GABBR1Q9UBS5 961 aa7.21□□□□□ -1.26
TCF4-249ENST00000625716 DDX25Q9UHL0 483 aaKnown RBP7.21□□□□□ -1.26
TCF4-249ENST00000625716 CYP3A7-CYP3A51PA0A087WV96 503 aa7.2□□□□□ -1.26
TCF4-249ENST00000625716 IGKV6D-21A0A0A0MT36 114 aa7.2□□□□□ -1.26
TCF4-249ENST00000625716 MBLAC1A4D2B0 266 aaPredicted RBP7.2□□□□□ -1.26
TCF4-249ENST00000625716 CCNT1O60563 726 aaKnown RBP7.2□□□□□ -1.26
TCF4-249ENST00000625716 ADAM23O75077 832 aa7.2□□□□□ -1.26
TCF4-249ENST00000625716 BAG4O95429 457 aaKnown RBP7.2□□□□□ -1.26
TCF4-249ENST00000625716 CTDNEP1O95476 244 aa7.2□□□□□ -1.26
TCF4-249ENST00000625716 GCFC2P16383 781 aaKnown RBP7.2□□□□□ -1.26
TCF4-249ENST00000625716 IGFBP4P22692 258 aa7.2□□□□□ -1.26
TCF4-249ENST00000625716 CYP3A7P24462 503 aa7.2□□□□□ -1.26
TCF4-249ENST00000625716 KLRC1P26715 233 aa7.2□□□□□ -1.26
TCF4-249ENST00000625716 DGKGP49619 791 aa7.2□□□□□ -1.26
TCF4-249ENST00000625716 ADAM17P78536 824 aa7.2□□□□□ -1.26
TCF4-249ENST00000625716 MRPS6P82932 125 aaKnown RBP7.2□□□□□ -1.26
TCF4-249ENST00000625716 GNL2Q13823 731 aaKnown RBP7.2□□□□□ -1.26
TCF4-249ENST00000625716 GRIN2CQ14957 1233 aa7.2□□□□□ -1.26
TCF4-249ENST00000625716 SAFBQ15424 915 aaKnown RBP eCLIP7.2□□□□□ -1.26
TCF4-249ENST00000625716 C8orf34Q49A92 452 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms