RNA–Protein interactions for RNA: ENST00000625299.1

PNKP-218, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 428 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-218ENST00000625299 FDXACB1Q9BRP7 624 aaPredicted RBP16.54■□□□□ 0.24
PNKP-218ENST00000625299 VN1R3Q9BXE9 311 aa16.54■□□□□ 0.24
PNKP-218ENST00000625299 ZMYND12Q9H0C1 365 aa16.54■□□□□ 0.24
PNKP-218ENST00000625299 FAM105AQ9NUU6 356 aa16.54■□□□□ 0.24
PNKP-218ENST00000625299 ESYT2A0FGR8 921 aa16.53■□□□□ 0.24
PNKP-218ENST00000625299 CARNS1A5YM72 827 aa16.53■□□□□ 0.24
PNKP-218ENST00000625299 TMEM150BA6NC51 233 aa16.53■□□□□ 0.24
PNKP-218ENST00000625299 C2CD2LO14523 706 aa16.53■□□□□ 0.24
PNKP-218ENST00000625299 MYBP10242 640 aa16.53■□□□□ 0.24
PNKP-218ENST00000625299 SKIP12755 728 aa16.53■□□□□ 0.24
PNKP-218ENST00000625299 ADD1P35611 737 aaKnown RBP16.53■□□□□ 0.24
PNKP-218ENST00000625299 CLCN4P51793 760 aa16.53■□□□□ 0.24
PNKP-218ENST00000625299 EXOSC10Q01780 885 aaKnown RBP16.53■□□□□ 0.24
PNKP-218ENST00000625299 LETM2Q2VYF4 491 aa16.53■□□□□ 0.24
PNKP-218ENST00000625299 DHX32Q7L7V1 743 aaKnown RBP16.53■□□□□ 0.24
PNKP-218ENST00000625299 CATSPER4Q7RTX7 472 aa16.53■□□□□ 0.24
PNKP-218ENST00000625299 RHPN2Q8IUC4 686 aa16.53■□□□□ 0.24
PNKP-218ENST00000625299 LENG9Q96B70 501 aa16.53■□□□□ 0.24
PNKP-218ENST00000625299 NLRP4Q96MN2 994 aa16.53■□□□□ 0.24
PNKP-218ENST00000625299 KLHL5Q96PQ7 755 aa16.53■□□□□ 0.24
PNKP-218ENST00000625299 TEKT3Q9BXF9 490 aa16.53■□□□□ 0.24
PNKP-218ENST00000625299 UNC45AQ9H3U1 944 aa16.53■□□□□ 0.24
PNKP-218ENST00000625299 MSH4O15457 936 aa16.52■□□□□ 0.24
PNKP-218ENST00000625299 B4GALT3O60512 393 aa16.52■□□□□ 0.24
PNKP-218ENST00000625299 OFD1O75665 1012 aa16.52■□□□□ 0.24
PNKP-218ENST00000625299 CNPP09543 421 aaKnown RBP16.52■□□□□ 0.24
PNKP-218ENST00000625299 GNA11P29992 359 aa16.52■□□□□ 0.24
PNKP-218ENST00000625299 GBP2P32456 591 aaPredicted RBP16.52■□□□□ 0.24
PNKP-218ENST00000625299 CIITAP33076 1130 aa16.52■□□□□ 0.24
PNKP-218ENST00000625299 DNM2P50570 870 aa16.52■□□□□ 0.24
PNKP-218ENST00000625299 JAK3P52333 1124 aa16.52■□□□□ 0.24
PNKP-218ENST00000625299 LRCH2Q5VUJ6 765 aa16.52■□□□□ 0.24
PNKP-218ENST00000625299 ZNF280BQ86YH2 543 aa16.52■□□□□ 0.24
PNKP-218ENST00000625299 URGCPQ8TCY9 931 aa16.52■□□□□ 0.24
PNKP-218ENST00000625299 RSAD2Q8WXG1 361 aa16.52■□□□□ 0.24
PNKP-218ENST00000625299 RIN2Q8WYP3 895 aaPredicted RBP16.52■□□□□ 0.24
PNKP-218ENST00000625299 RSPH1Q8WYR4 309 aa16.52■□□□□ 0.24
PNKP-218ENST00000625299 CCDC136Q96JN2 1154 aa16.52■□□□□ 0.24
PNKP-218ENST00000625299 CA14Q9ULX7 337 aa16.52■□□□□ 0.24
PNKP-218ENST00000625299 WDR87Q6ZQQ6 2873 aa16.52■□□□□ 0.24
PNKP-218ENST00000625299 EP300Q09472 2414 aaPredicted RBP16.51■□□□□ 0.23
PNKP-218ENST00000625299 SFNP31947 248 aa16.51■□□□□ 0.23
PNKP-218ENST00000625299 RAB27AP51159 221 aa16.51■□□□□ 0.23
PNKP-218ENST00000625299 TARBP2Q15633 366 aaKnown RBP16.51■□□□□ 0.23
PNKP-218ENST00000625299 ADCK5Q3MIX3 580 aa16.51■□□□□ 0.23
PNKP-218ENST00000625299 KSR1Q8IVT5 923 aa16.51■□□□□ 0.23
PNKP-218ENST00000625299 PGBD4Q96DM1 585 aa16.51■□□□□ 0.23
PNKP-218ENST00000625299 FAM193BQ96PV7 902 aaPredicted RBP16.51■□□□□ 0.23
PNKP-218ENST00000625299 HINFPQ9BQA5 517 aa16.51■□□□□ 0.23
PNKP-218ENST00000625299 TRAIPQ9BWF2 469 aa16.51■□□□□ 0.23
PNKP-218ENST00000625299 INO80BQ9C086 356 aaPredicted RBP16.51■□□□□ 0.23
PNKP-218ENST00000625299 MAN1C1Q9NR34 630 aa16.51■□□□□ 0.23
PNKP-218ENST00000625299 MRPL17Q9NRX2 175 aaKnown RBP16.51■□□□□ 0.23
PNKP-218ENST00000625299 IGSF9Q9P2J2 1179 aa16.51■□□□□ 0.23
PNKP-218ENST00000625299 SUCLA2Q9P2R7 463 aaPredicted RBP16.51■□□□□ 0.23
PNKP-218ENST00000625299 R4GN57 208 aa16.51■□□□□ 0.23
PNKP-218ENST00000625299 CCDC196A0A1B0GTZ2 297 aa16.5■□□□□ 0.23
PNKP-218ENST00000625299 DDHD2O94830 711 aa16.5■□□□□ 0.23
PNKP-218ENST00000625299 LMNAP02545 664 aaKnown RBP16.5■□□□□ 0.23
PNKP-218ENST00000625299 AK2P54819 239 aa16.5■□□□□ 0.23
PNKP-218ENST00000625299 CDC42EP1Q00587 391 aa16.5■□□□□ 0.23
PNKP-218ENST00000625299 AKAP17AQ02040 695 aaKnown RBP16.5■□□□□ 0.23
PNKP-218ENST00000625299 SPECC1Q5M775 1068 aa16.5■□□□□ 0.23
PNKP-218ENST00000625299 C15orf39Q6ZRI6 1047 aa16.5■□□□□ 0.23
PNKP-218ENST00000625299 MIER3Q7Z3K6 550 aa16.5■□□□□ 0.23
PNKP-218ENST00000625299 KIAA2013Q8IYS2 634 aa16.5■□□□□ 0.23
PNKP-218ENST00000625299 BICD2Q8TD16 824 aa16.5■□□□□ 0.23
PNKP-218ENST00000625299 PHKBQ93100 1093 aa16.5■□□□□ 0.23
PNKP-218ENST00000625299 RIT2Q99578 217 aa16.5■□□□□ 0.23
PNKP-218ENST00000625299 FAN1Q9Y2M0 1017 aa16.5■□□□□ 0.23
PNKP-218ENST00000625299 PCDHB2Q9Y5E7 798 aa16.5■□□□□ 0.23
PNKP-218ENST00000625299 DMXL1Q9Y485 3027 aa16.49■□□□□ 0.23
PNKP-218ENST00000625299 CACNA1AO00555 2505 aa16.49■□□□□ 0.23
PNKP-218ENST00000625299 KRBA1A5PL33 1030 aa16.49■□□□□ 0.23
PNKP-218ENST00000625299 DDX11L8A8MPP1 907 aa16.49■□□□□ 0.23
PNKP-218ENST00000625299 N4BP1O75113 896 aaKnown RBP16.49■□□□□ 0.23
PNKP-218ENST00000625299 POMCP01189 267 aa16.49■□□□□ 0.23
PNKP-218ENST00000625299 URODP06132 367 aa16.49■□□□□ 0.23
PNKP-218ENST00000625299 AFF1P51825 1210 aaKnown RBP16.49■□□□□ 0.23
PNKP-218ENST00000625299 IRX6P78412 446 aaPredicted RBP16.49■□□□□ 0.23
PNKP-218ENST00000625299 NONOQ15233 471 aaKnown RBP eCLIP16.49■□□□□ 0.23
PNKP-218ENST00000625299 XKR3Q5GH77 459 aa16.49■□□□□ 0.23
PNKP-218ENST00000625299 ZNF410Q86VK4 478 aa16.49■□□□□ 0.23
PNKP-218ENST00000625299 RASEFQ8IZ41 740 aa16.49■□□□□ 0.23
PNKP-218ENST00000625299 STAMQ92783 540 aa16.49■□□□□ 0.23
PNKP-218ENST00000625299 SLC5A5Q92911 643 aa16.49■□□□□ 0.23
PNKP-218ENST00000625299 RMDN1Q96DB5 314 aa16.49■□□□□ 0.23
PNKP-218ENST00000625299 NIFKQ9BYG3 293 aaKnown RBP16.49■□□□□ 0.23
PNKP-218ENST00000625299 RSAD1Q9HA92 442 aa16.49■□□□□ 0.23
PNKP-218ENST00000625299 STK39Q9UEW8 545 aa16.49■□□□□ 0.23
PNKP-218ENST00000625299 PRG3Q9Y2Y8 225 aaPredicted RBP16.49■□□□□ 0.23
PNKP-218ENST00000625299 ZNF292O60281 2723 aa16.49■□□□□ 0.23
PNKP-218ENST00000625299 CCDC195A0A1B0GUA6 201 aa16.48■□□□□ 0.23
PNKP-218ENST00000625299 INPPL1O15357 1258 aa16.48■□□□□ 0.23
PNKP-218ENST00000625299 ZNF623O75123 536 aa16.48■□□□□ 0.23
PNKP-218ENST00000625299 ALDH2P05091 517 aa16.48■□□□□ 0.23
PNKP-218ENST00000625299 CPA1P15085 419 aa16.48■□□□□ 0.23
PNKP-218ENST00000625299 RCAN1P53805 252 aa16.48■□□□□ 0.23
PNKP-218ENST00000625299 PLA2G4FQ68DD2 849 aa16.48■□□□□ 0.23
PNKP-218ENST00000625299 AGMOQ6ZNB7 445 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms