RNA–Protein interactions for RNA: ENST00000624931.1

PCF11-207, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

Gene PCF11, Length 1,720 nt, Biotype TEC, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-207ENST00000624931 RPA1P27694 616 aa19.17■□□□□ 0.66
PCF11-207ENST00000624931 GCLCP48506 637 aaPredicted RBP19.17■□□□□ 0.66
PCF11-207ENST00000624931 YTHDF3Q7Z739 585 aaKnown RBP19.17■□□□□ 0.66
PCF11-207ENST00000624931 NLRX1Q86UT6 975 aa19.17■□□□□ 0.66
PCF11-207ENST00000624931 IQCKQ8N0W5 287 aa19.17■□□□□ 0.66
PCF11-207ENST00000624931 HDAC7Q8WUI4 952 aa19.17■□□□□ 0.66
PCF11-207ENST00000624931 GPRASP2Q96D09 838 aa19.17■□□□□ 0.66
PCF11-207ENST00000624931 MAF1Q9H063 256 aa19.17■□□□□ 0.66
PCF11-207ENST00000624931 SLC39A2Q9NP94 309 aa19.17■□□□□ 0.66
PCF11-207ENST00000624931 ADGRA2Q96PE1 1338 aa19.17■□□□□ 0.66
PCF11-207ENST00000624931 MCM3APO60318 1980 aa19.17■□□□□ 0.66
PCF11-207ENST00000624931 DNAJC25-GNG10A0A024R161 153 aa19.17■□□□□ 0.66
PCF11-207ENST00000624931 HMGB1P1B2RPK0 211 aaPredicted RBP19.17■□□□□ 0.66
PCF11-207ENST00000624931 KIAA0754O94854 1291 aa19.17■□□□□ 0.66
PCF11-207ENST00000624931 CCNE2O96020 404 aa19.17■□□□□ 0.66
PCF11-207ENST00000624931 PLA2G4BP0C869 781 aa19.17■□□□□ 0.66
PCF11-207ENST00000624931 TNNC1P63316 161 aa19.17■□□□□ 0.66
PCF11-207ENST00000624931 FKBP3Q00688 224 aaKnown RBP19.17■□□□□ 0.66
PCF11-207ENST00000624931 NAB2Q15742 525 aa19.17■□□□□ 0.66
PCF11-207ENST00000624931 IFI16Q16666 785 aaKnown RBP19.17■□□□□ 0.66
PCF11-207ENST00000624931 EEPD1Q7L9B9 569 aa19.17■□□□□ 0.66
PCF11-207ENST00000624931 DYMQ7RTS9 669 aa19.17■□□□□ 0.66
PCF11-207ENST00000624931 ARFGAP2Q8N6H7 521 aa19.17■□□□□ 0.66
PCF11-207ENST00000624931 BANK1Q8NDB2 785 aa19.17■□□□□ 0.66
PCF11-207ENST00000624931 POLR3CQ9BUI4 534 aaPredicted RBP19.17■□□□□ 0.66
PCF11-207ENST00000624931 NT5C3AQ9H0P0 336 aa19.17■□□□□ 0.66
PCF11-207ENST00000624931 ATP8B3O60423 1300 aa19.16■□□□□ 0.66
PCF11-207ENST00000624931 KCNA2P16389 499 aa19.16■□□□□ 0.66
PCF11-207ENST00000624931 EDNRBP24530 442 aa19.16■□□□□ 0.66
PCF11-207ENST00000624931 EHHADHQ08426 723 aa19.16■□□□□ 0.66
PCF11-207ENST00000624931 STXBP2Q15833 593 aa19.16■□□□□ 0.66
PCF11-207ENST00000624931 LRIG3Q6UXM1 1119 aa19.16■□□□□ 0.66
PCF11-207ENST00000624931 LRRC55Q6ZSA7 311 aa19.16■□□□□ 0.66
PCF11-207ENST00000624931 SEPT14Q6ZU15 432 aa19.16■□□□□ 0.66
PCF11-207ENST00000624931 PAXIP1Q6ZW49 1069 aaPredicted RBP19.16■□□□□ 0.66
PCF11-207ENST00000624931 MIER3Q7Z3K6 550 aa19.16■□□□□ 0.66
PCF11-207ENST00000624931 TPH2Q8IWU9 490 aa19.16■□□□□ 0.66
PCF11-207ENST00000624931 C3orf20Q8ND61 904 aa19.16■□□□□ 0.66
PCF11-207ENST00000624931 IWS1Q96ST2 819 aa19.16■□□□□ 0.66
PCF11-207ENST00000624931 HSD17B14Q9BPX1 270 aa19.16■□□□□ 0.66
PCF11-207ENST00000624931 COL4A3BPQ9Y5P4 624 aa19.16■□□□□ 0.66
PCF11-207ENST00000624931 NPHP3-ACAD11A0A0J9YXS1 232 aa19.15■□□□□ 0.66
PCF11-207ENST00000624931 TMEM88BA6NKF7 163 aa19.15■□□□□ 0.66
PCF11-207ENST00000624931 ZBTB39O15060 712 aa19.15■□□□□ 0.66
PCF11-207ENST00000624931 SLITRK3O94933 977 aa19.15■□□□□ 0.66
PCF11-207ENST00000624931 MATR3P43243 847 aaKnown RBP eCLIP19.15■□□□□ 0.66
PCF11-207ENST00000624931 MARSP56192 900 aaKnown RBP19.15■□□□□ 0.66
PCF11-207ENST00000624931 CCNA1P78396 465 aa19.15■□□□□ 0.66
PCF11-207ENST00000624931 CACNB1Q02641 598 aaPredicted RBP19.15■□□□□ 0.66
PCF11-207ENST00000624931 TAF1CQ15572 869 aaPredicted RBP19.15■□□□□ 0.66
PCF11-207ENST00000624931 TTMPQ5BVD1 217 aa19.15■□□□□ 0.66
PCF11-207ENST00000624931 MYOCDQ8IZQ8 938 aa19.15■□□□□ 0.66
PCF11-207ENST00000624931 TSEN2Q8NCE0 465 aaKnown RBP19.15■□□□□ 0.66
PCF11-207ENST00000624931 HPS3Q969F9 1004 aa19.15■□□□□ 0.66
PCF11-207ENST00000624931 DRC1Q96MC2 740 aa19.15■□□□□ 0.66
PCF11-207ENST00000624931 ZIM3Q96PE6 472 aa19.15■□□□□ 0.66
PCF11-207ENST00000624931 BMP2KQ9NSY1 1161 aaPredicted RBP19.15■□□□□ 0.66
PCF11-207ENST00000624931 RBM12Q9NTZ6 932 aaKnown RBP19.15■□□□□ 0.66
PCF11-207ENST00000624931 PCDHGC5Q9Y5F6 944 aa19.15■□□□□ 0.66
PCF11-207ENST00000624931 PLXNA1Q9UIW2 1896 aa19.14■□□□□ 0.66
PCF11-207ENST00000624931 NDUFAB1O14561 156 aa19.14■□□□□ 0.66
PCF11-207ENST00000624931 ANXA13P27216 316 aa19.14■□□□□ 0.66
PCF11-207ENST00000624931 NAP1L1P55209 391 aaKnown RBP19.14■□□□□ 0.66
PCF11-207ENST00000624931 SLC7A5Q01650 507 aa19.14■□□□□ 0.66
PCF11-207ENST00000624931 SP2Q02086 613 aa19.14■□□□□ 0.66
PCF11-207ENST00000624931 SP4Q02446 784 aa19.14■□□□□ 0.66
PCF11-207ENST00000624931 EPHA7Q15375 998 aa19.14■□□□□ 0.66
PCF11-207ENST00000624931 HGSNATQ68CP4 663 aa19.14■□□□□ 0.66
PCF11-207ENST00000624931 CYP4F22Q6NT55 531 aa19.14■□□□□ 0.66
PCF11-207ENST00000624931 GPBP1Q86WP2 473 aa19.14■□□□□ 0.66
PCF11-207ENST00000624931 IFNL1Q8IU54 200 aa19.14■□□□□ 0.66
PCF11-207ENST00000624931 PIGOQ8TEQ8 1089 aa19.14■□□□□ 0.66
PCF11-207ENST00000624931 PLEKHA4Q9H4M7 779 aa19.14■□□□□ 0.66
PCF11-207ENST00000624931 TBC1D22BQ9NU19 505 aa19.14■□□□□ 0.66
PCF11-207ENST00000624931 SPATA31C2B4DYI2 1134 aa19.14■□□□□ 0.65
PCF11-207ENST00000624931 EPHB6O15197 1021 aa19.14■□□□□ 0.65
PCF11-207ENST00000624931 TOMM70O94826 608 aa19.14■□□□□ 0.65
PCF11-207ENST00000624931 ADORA2AP29274 412 aa19.14■□□□□ 0.65
PCF11-207ENST00000624931 SLC12A3P55017 1021 aa19.14■□□□□ 0.65
PCF11-207ENST00000624931 SLC18A3Q16572 532 aa19.14■□□□□ 0.65
PCF11-207ENST00000624931 UGCGQ16739 394 aa19.14■□□□□ 0.65
PCF11-207ENST00000624931 FAM110CQ1W6H9 321 aa19.14■□□□□ 0.65
PCF11-207ENST00000624931 TDRD12Q587J7 1177 aaKnown RBP19.14■□□□□ 0.65
PCF11-207ENST00000624931 MEI1Q5TIA1 1274 aa19.14■□□□□ 0.65
PCF11-207ENST00000624931 DDX12PQ92771 950 aa19.14■□□□□ 0.65
PCF11-207ENST00000624931 PBKQ96KB5 322 aa19.14■□□□□ 0.65
PCF11-207ENST00000624931 LXNQ9BS40 222 aa19.14■□□□□ 0.65
PCF11-207ENST00000624931 EPN3Q9H201 632 aa19.14■□□□□ 0.65
PCF11-207ENST00000624931 TUFT1Q9NNX1 390 aa19.14■□□□□ 0.65
PCF11-207ENST00000624931 SAMM50Q9Y512 469 aa19.14■□□□□ 0.65
PCF11-207ENST00000624931 HEXIM1O94992 359 aaKnown RBP19.13■□□□□ 0.65
PCF11-207ENST00000624931 DRP2Q13474 957 aa19.13■□□□□ 0.65
PCF11-207ENST00000624931 CUL1Q13616 776 aa19.13■□□□□ 0.65
PCF11-207ENST00000624931 GPR142Q7Z601 462 aa19.13■□□□□ 0.65
PCF11-207ENST00000624931 TAF4BQ92750 862 aa19.13■□□□□ 0.65
PCF11-207ENST00000624931 ARL8AQ96BM9 186 aa19.13■□□□□ 0.65
PCF11-207ENST00000624931 CCDC43Q96MW1 224 aaKnown RBP19.13■□□□□ 0.65
PCF11-207ENST00000624931 AIPL1Q9NZN9 384 aa19.13■□□□□ 0.65
PCF11-207ENST00000624931 BZW2Q9Y6E2 419 aaKnown RBP19.13■□□□□ 0.65
PCF11-207ENST00000624931 GOLGA6L10A6NI86 522 aa19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms