RNA–Protein interactions for RNA: ENST00000622878.4

DDB2-216, Transcript of damage specific DNA binding protein 2, humanhuman

TSL 4

Gene DDB2, Length 556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB2-216ENST00000622878 ST18O60284 1047 aa17.81■□□□□ 0.44
DDB2-216ENST00000622878 DGAT1O75907 488 aa17.81■□□□□ 0.44
DDB2-216ENST00000622878 CSPG5O95196 566 aa17.81■□□□□ 0.44
DDB2-216ENST00000622878 OR52Z1P0C646 297 aa17.81■□□□□ 0.44
DDB2-216ENST00000622878 SKIP12755 728 aa17.81■□□□□ 0.44
DDB2-216ENST00000622878 IL9P15248 144 aa17.81■□□□□ 0.44
DDB2-216ENST00000622878 ARL2P36404 184 aa17.81■□□□□ 0.44
DDB2-216ENST00000622878 TECP42680 631 aa17.81■□□□□ 0.44
DDB2-216ENST00000622878 ERVFC1P60507 584 aa17.81■□□□□ 0.44
DDB2-216ENST00000622878 POU5F1BQ06416 359 aa17.81■□□□□ 0.44
DDB2-216ENST00000622878 ADAM15Q13444 863 aa17.81■□□□□ 0.44
DDB2-216ENST00000622878 MXD4Q14582 209 aaPredicted RBP17.81■□□□□ 0.44
DDB2-216ENST00000622878 PUS10Q3MIT2 529 aaKnown RBP17.81■□□□□ 0.44
DDB2-216ENST00000622878 TTC38Q5R3I4 469 aa17.81■□□□□ 0.44
DDB2-216ENST00000622878 UBXN11Q5T124 520 aa17.81■□□□□ 0.44
DDB2-216ENST00000622878 TWF2Q6IBS0 349 aaKnown RBP17.81■□□□□ 0.44
DDB2-216ENST00000622878 PTCRAQ6ISU1 281 aaPredicted RBP17.81■□□□□ 0.44
DDB2-216ENST00000622878 KCNT2Q6UVM3 1135 aa17.81■□□□□ 0.44
DDB2-216ENST00000622878 ABI1Q8IZP0 508 aa17.81■□□□□ 0.44
DDB2-216ENST00000622878 TMX3Q96JJ7 454 aa17.81■□□□□ 0.44
DDB2-216ENST00000622878 LZTS1Q9Y250 596 aa17.81■□□□□ 0.44
DDB2-216ENST00000622878 MEIS3P2A8K0S8 358 aa17.8■□□□□ 0.44
DDB2-216ENST00000622878 FSCN2O14926 492 aa17.8■□□□□ 0.44
DDB2-216ENST00000622878 TBX10O75333 385 aa17.8■□□□□ 0.44
DDB2-216ENST00000622878 PBX3P40426 434 aa17.8■□□□□ 0.44
DDB2-216ENST00000622878 RAB27AP51159 221 aa17.8■□□□□ 0.44
DDB2-216ENST00000622878 PTENP60484 403 aa17.8■□□□□ 0.44
DDB2-216ENST00000622878 NBR1Q14596 966 aa17.8■□□□□ 0.44
DDB2-216ENST00000622878 MRPL10Q7Z7H8 261 aaKnown RBP17.8■□□□□ 0.44
DDB2-216ENST00000622878 FAM178BQ8IXR5 827 aa17.8■□□□□ 0.44
DDB2-216ENST00000622878 THNSL1Q8IYQ7 743 aa17.8■□□□□ 0.44
DDB2-216ENST00000622878 ASAP3Q8TDY4 903 aa17.8■□□□□ 0.44
DDB2-216ENST00000622878 RSPH1Q8WYR4 309 aa17.8■□□□□ 0.44
DDB2-216ENST00000622878 LPPQ93052 612 aa17.8■□□□□ 0.44
DDB2-216ENST00000622878 TBC1D32Q96NH3 1257 aa17.8■□□□□ 0.44
DDB2-216ENST00000622878 CD320Q9NPF0 282 aa17.8■□□□□ 0.44
DDB2-216ENST00000622878 TLR9Q9NR96 1032 aa17.8■□□□□ 0.44
DDB2-216ENST00000622878 DBR1Q9UK59 544 aaKnown RBP17.8■□□□□ 0.44
DDB2-216ENST00000622878 GLRA2P23416 452 aa17.79■□□□□ 0.44
DDB2-216ENST00000622878 RPA1P27694 616 aa17.79■□□□□ 0.44
DDB2-216ENST00000622878 FXR2P51116 673 aaKnown RBP eCLIP17.79■□□□□ 0.44
DDB2-216ENST00000622878 CAPSQ13938 189 aa17.79■□□□□ 0.44
DDB2-216ENST00000622878 PCBP1Q15365 356 aaKnown RBP eCLIP17.79■□□□□ 0.44
DDB2-216ENST00000622878 EFHBQ8N7U6 833 aa17.79■□□□□ 0.44
DDB2-216ENST00000622878 MRPS27Q92552 414 aaKnown RBP17.79■□□□□ 0.44
DDB2-216ENST00000622878 MSLNLQ96KJ4 702 aa17.79■□□□□ 0.44
DDB2-216ENST00000622878 ZNF558Q96NG5 402 aa17.79■□□□□ 0.44
DDB2-216ENST00000622878 MRPL9Q9BYD2 267 aaKnown RBP17.79■□□□□ 0.44
DDB2-216ENST00000622878 NFKBIZQ9BYH8 718 aa17.79■□□□□ 0.44
DDB2-216ENST00000622878 IGFLR1Q9H665 355 aa17.79■□□□□ 0.44
DDB2-216ENST00000622878 PCDHB2Q9Y5E7 798 aa17.79■□□□□ 0.44
DDB2-216ENST00000622878 OFD1O75665 1012 aa17.78■□□□□ 0.44
DDB2-216ENST00000622878 GLP2RO95838 553 aa17.78■□□□□ 0.44
DDB2-216ENST00000622878 PPM1AP35813 382 aa17.78■□□□□ 0.44
DDB2-216ENST00000622878 NRIP1P48552 1158 aa17.78■□□□□ 0.44
DDB2-216ENST00000622878 MBTD1Q05BQ5 628 aa17.78■□□□□ 0.44
DDB2-216ENST00000622878 GNL2Q13823 731 aaKnown RBP17.78■□□□□ 0.44
DDB2-216ENST00000622878 AMHR2Q16671 573 aa17.78■□□□□ 0.44
DDB2-216ENST00000622878 LONRF3Q496Y0 759 aa17.78■□□□□ 0.44
DDB2-216ENST00000622878 PDE12Q6L8Q7 609 aaKnown RBP17.78■□□□□ 0.44
DDB2-216ENST00000622878 AGMOQ6ZNB7 445 aa17.78■□□□□ 0.44
DDB2-216ENST00000622878 EP400NLQ6ZTU2 488 aa17.78■□□□□ 0.44
DDB2-216ENST00000622878 SLC39A11Q8N1S5 342 aa17.78■□□□□ 0.44
DDB2-216ENST00000622878 PPP2R3CQ969Q6 453 aa17.78■□□□□ 0.44
DDB2-216ENST00000622878 NACC1Q96RE7 527 aa17.78■□□□□ 0.44
DDB2-216ENST00000622878 UPF2Q9HAU5 1272 aaKnown RBP17.78■□□□□ 0.44
DDB2-216ENST00000622878 SPG21Q9NZD8 308 aa17.78■□□□□ 0.44
DDB2-216ENST00000622878 CLEC1BQ9P126 229 aa17.78■□□□□ 0.44
DDB2-216ENST00000622878 NOL7Q9UMY1 257 aaKnown RBP17.78■□□□□ 0.44
DDB2-216ENST00000622878 PCDHB6Q9Y5E3 794 aa17.78■□□□□ 0.44
DDB2-216ENST00000622878 TSPAN1O60635 241 aa17.77■□□□□ 0.44
DDB2-216ENST00000622878 MUTP22033 750 aa17.77■□□□□ 0.44
DDB2-216ENST00000622878 BCAR1P56945 870 aa17.77■□□□□ 0.44
DDB2-216ENST00000622878 TFDP1Q14186 410 aa17.77■□□□□ 0.44
DDB2-216ENST00000622878 ECM1Q16610 540 aa17.77■□□□□ 0.44
DDB2-216ENST00000622878 NOMO2Q5JPE7 1267 aa17.77■□□□□ 0.44
DDB2-216ENST00000622878 POTEGQ6S5H5 508 aa17.77■□□□□ 0.44
DDB2-216ENST00000622878 GLB1LQ6UWU2 654 aa17.77■□□□□ 0.44
DDB2-216ENST00000622878 RBM23Q86U06 439 aaKnown RBP17.77■□□□□ 0.44
DDB2-216ENST00000622878 KHSRPQ92945 711 aaKnown RBP eCLIP17.77■□□□□ 0.445e-10■■□□□ 14
DDB2-216ENST00000622878 PGBD4Q96DM1 585 aa17.77■□□□□ 0.44
DDB2-216ENST00000622878 POLR3FQ9H1D9 316 aaPredicted RBP17.77■□□□□ 0.44
DDB2-216ENST00000622878 TBC1D13Q9NVG8 400 aa17.77■□□□□ 0.44
DDB2-216ENST00000622878 B4GALT3O60512 393 aa17.76■□□□□ 0.43
DDB2-216ENST00000622878 USO1O60763 962 aaKnown RBP17.76■□□□□ 0.43
DDB2-216ENST00000622878 MCM2P49736 904 aa17.76■□□□□ 0.43
DDB2-216ENST00000622878 PTGDRQ13258 359 aa17.76■□□□□ 0.43
DDB2-216ENST00000622878 KCNC3Q14003 757 aa17.76■□□□□ 0.43
DDB2-216ENST00000622878 PDIA5Q14554 519 aa17.76■□□□□ 0.43
DDB2-216ENST00000622878 IGSF22Q8N9C0 903 aa17.76■□□□□ 0.43
DDB2-216ENST00000622878 SMG8Q8ND04 991 aaKnown RBP17.76■□□□□ 0.43
DDB2-216ENST00000622878 VN1R2Q8NFZ6 395 aa17.76■□□□□ 0.43
DDB2-216ENST00000622878 ERMNQ8TAM6 284 aa17.76■□□□□ 0.43
DDB2-216ENST00000622878 MICAL1Q8TDZ2 1067 aa17.76■□□□□ 0.43
DDB2-216ENST00000622878 CCDC43Q96MW1 224 aaKnown RBP17.76■□□□□ 0.43
DDB2-216ENST00000622878 NRDE2Q9H7Z3 1164 aa17.76■□□□□ 0.43
DDB2-216ENST00000622878 TLE6Q9H808 572 aa17.76■□□□□ 0.43
DDB2-216ENST00000622878 GPRC5CQ9NQ84 441 aa17.76■□□□□ 0.43
DDB2-216ENST00000622878 PUF60Q9UHX1 559 aaKnown RBP17.76■□□□□ 0.43
DDB2-216ENST00000622878 PER2O15055 1255 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms