RNA–Protein interactions for RNA: ENST00000622776.1

CPSF1-214, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 1,029 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-214ENST00000622776 CYP46A1Q9Y6A2 500 aa26.68■■□□□ 1.86
CPSF1-214ENST00000622776 ZFHX2Q9C0A1 2572 aaPredicted RBP26.67■■□□□ 1.86
CPSF1-214ENST00000622776 CARNS1A5YM72 827 aa26.67■■□□□ 1.86
CPSF1-214ENST00000622776 ZNF623O75123 536 aa26.67■■□□□ 1.86
CPSF1-214ENST00000622776 POLGP54098 1239 aaPredicted RBP26.67■■□□□ 1.86
CPSF1-214ENST00000622776 INF2Q27J81 1249 aa26.67■■□□□ 1.86
CPSF1-214ENST00000622776 NOMO2Q5JPE7 1267 aa26.67■■□□□ 1.86
CPSF1-214ENST00000622776 CPLX2Q6PUV4 134 aaKnown RBP26.67■■□□□ 1.86
CPSF1-214ENST00000622776 TMEM87AQ8NBN3 555 aa26.67■■□□□ 1.86
CPSF1-214ENST00000622776 AUTS2Q8WXX7 1259 aa26.67■■□□□ 1.86
CPSF1-214ENST00000622776 IGSF21Q96ID5 467 aa26.67■■□□□ 1.86
CPSF1-214ENST00000622776 NLRP4Q96MN2 994 aa26.67■■□□□ 1.86
CPSF1-214ENST00000622776 INPP5FQ9Y2H2 1132 aa26.67■■□□□ 1.86
CPSF1-214ENST00000622776 IRAK3Q9Y616 596 aa26.67■■□□□ 1.86
CPSF1-214ENST00000622776 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP26.66■■□□□ 1.86
CPSF1-214ENST00000622776 MEIS3P2A8K0S8 358 aa26.66■■□□□ 1.86
CPSF1-214ENST00000622776 C2CD4DB7Z1M9 353 aa26.66■■□□□ 1.86
CPSF1-214ENST00000622776 EML1O00423 815 aa26.66■■□□□ 1.86
CPSF1-214ENST00000622776 SLC37A4O43826 429 aa26.66■■□□□ 1.86
CPSF1-214ENST00000622776 AVPR2P30518 371 aa26.66■■□□□ 1.86
CPSF1-214ENST00000622776 MTHFRP42898 656 aa26.66■■□□□ 1.86
CPSF1-214ENST00000622776 RAB27AP51159 221 aa26.66■■□□□ 1.86
CPSF1-214ENST00000622776 PLA2G4FQ68DD2 849 aa26.66■■□□□ 1.86
CPSF1-214ENST00000622776 KRT25Q7Z3Z0 450 aa26.66■■□□□ 1.86
CPSF1-214ENST00000622776 DDX53Q86TM3 631 aaKnown RBP26.66■■□□□ 1.86
CPSF1-214ENST00000622776 KREMEN2Q8NCW0 462 aa26.66■■□□□ 1.86
CPSF1-214ENST00000622776 RIPOR3Q96MK2 946 aa26.66■■□□□ 1.86
CPSF1-214ENST00000622776 CYP26B1Q9NR63 512 aa26.66■■□□□ 1.86
CPSF1-214ENST00000622776 PTPRZ1P23471 2315 aaPredicted RBP26.66■■□□□ 1.86
CPSF1-214ENST00000622776 KMT2EQ8IZD2 1858 aa26.66■■□□□ 1.86
CPSF1-214ENST00000622776 EPB41L2O43491 1005 aaKnown RBP26.65■■□□□ 1.86
CPSF1-214ENST00000622776 OFD1O75665 1012 aa26.65■■□□□ 1.86
CPSF1-214ENST00000622776 GALTP07902 379 aa26.65■■□□□ 1.86
CPSF1-214ENST00000622776 CTSAP10619 480 aa26.65■■□□□ 1.86
CPSF1-214ENST00000622776 RNASELQ05823 741 aaKnown RBP26.65■■□□□ 1.86
CPSF1-214ENST00000622776 STK3Q13188 491 aa26.65■■□□□ 1.86
CPSF1-214ENST00000622776 GIT2Q14161 759 aa26.65■■□□□ 1.86
CPSF1-214ENST00000622776 RARS2Q5T160 578 aaKnown RBP26.65■■□□□ 1.86
CPSF1-214ENST00000622776 C12orf76Q8N812 135 aaPredicted RBP26.65■■□□□ 1.86
CPSF1-214ENST00000622776 BCL7CQ8WUZ0 217 aaPredicted RBP26.65■■□□□ 1.86
CPSF1-214ENST00000622776 IFT122Q9HBG6 1241 aa26.65■■□□□ 1.86
CPSF1-214ENST00000622776 DZANK1Q9NVP4 752 aa26.65■■□□□ 1.86
CPSF1-214ENST00000622776 WEE2P0C1S8 567 aa26.64■■□□□ 1.86
CPSF1-214ENST00000622776 EPCAMP16422 314 aa26.64■■□□□ 1.86
CPSF1-214ENST00000622776 QARSP47897 775 aaKnown RBP26.64■■□□□ 1.86
CPSF1-214ENST00000622776 NPEPPSP55786 919 aa26.64■■□□□ 1.86
CPSF1-214ENST00000622776 PPP2R5CQ13362 524 aa26.64■■□□□ 1.86
CPSF1-214ENST00000622776 LETM2Q2VYF4 491 aa26.64■■□□□ 1.86
CPSF1-214ENST00000622776 FAM20AQ96MK3 541 aa26.64■■□□□ 1.86
CPSF1-214ENST00000622776 TM6SF1Q9BZW5 370 aa26.64■■□□□ 1.86
CPSF1-214ENST00000622776 GBP3Q9H0R5 595 aa26.64■■□□□ 1.86
CPSF1-214ENST00000622776 VAV3Q9UKW4 847 aa26.64■■□□□ 1.86
CPSF1-214ENST00000622776 KCNJ14Q9UNX9 436 aa26.64■■□□□ 1.86
CPSF1-214ENST00000622776 SORCS3Q9UPU3 1222 aa26.64■■□□□ 1.86
CPSF1-214ENST00000622776 COL4A3BPQ9Y5P4 624 aa26.64■■□□□ 1.86
CPSF1-214ENST00000622776 PDGFBP01127 241 aaPredicted RBP26.63■■□□□ 1.85
CPSF1-214ENST00000622776 SLC11A1P49279 550 aa26.63■■□□□ 1.85
CPSF1-214ENST00000622776 SLC22A17Q8WUG5 538 aa26.63■■□□□ 1.85
CPSF1-214ENST00000622776 PGBD4Q96DM1 585 aa26.63■■□□□ 1.85
CPSF1-214ENST00000622776 SLKQ9H2G2 1235 aaPredicted RBP26.63■■□□□ 1.85
CPSF1-214ENST00000622776 KCNMB3Q9NPA1 279 aa26.63■■□□□ 1.85
CPSF1-214ENST00000622776 AGPAT5Q9NUQ2 364 aa26.63■■□□□ 1.85
CPSF1-214ENST00000622776 DNAJB4Q9UDY4 337 aa26.63■■□□□ 1.85
CPSF1-214ENST00000622776 PCDHB2Q9Y5E7 798 aa26.63■■□□□ 1.85
CPSF1-214ENST00000622776 DKC1O60832 514 aaKnown RBP eCLIP26.62■■□□□ 1.85
CPSF1-214ENST00000622776 MTMR3Q13615 1198 aa26.62■■□□□ 1.85
CPSF1-214ENST00000622776 ATAT1Q5SQI0 421 aa26.62■■□□□ 1.85
CPSF1-214ENST00000622776 KIAA1841Q6NSI8 718 aa26.62■■□□□ 1.85
CPSF1-214ENST00000622776 KANK3Q6NY19 840 aa26.62■■□□□ 1.85
CPSF1-214ENST00000622776 UBALD2Q8IYN6 164 aa26.62■■□□□ 1.85
CPSF1-214ENST00000622776 ZNF579Q8NAF0 562 aaKnown RBP26.62■■□□□ 1.85
CPSF1-214ENST00000622776 SLC7A3Q8WY07 619 aa26.62■■□□□ 1.85
CPSF1-214ENST00000622776 RIF1Q5UIP0 2472 aaKnown RBP26.62■■□□□ 1.85
CPSF1-214ENST00000622776 CCDC194A0A1B0GVG4 234 aa26.61■■□□□ 1.85
CPSF1-214ENST00000622776 B4GALT3O60512 393 aa26.61■■□□□ 1.85
CPSF1-214ENST00000622776 BRD1O95696 1058 aa26.61■■□□□ 1.85
CPSF1-214ENST00000622776 P4HBP07237 508 aaKnown RBP26.61■■□□□ 1.85
CPSF1-214ENST00000622776 AGMOQ6ZNB7 445 aa26.61■■□□□ 1.85
CPSF1-214ENST00000622776 SRGAP1Q7Z6B7 1085 aa26.61■■□□□ 1.85
CPSF1-214ENST00000622776 NEK8Q86SG6 692 aa26.61■■□□□ 1.85
CPSF1-214ENST00000622776 ZNF280BQ86YH2 543 aa26.61■■□□□ 1.85
CPSF1-214ENST00000622776 EXOC8Q8IYI6 725 aa26.61■■□□□ 1.85
CPSF1-214ENST00000622776 URGCPQ8TCY9 931 aa26.61■■□□□ 1.85
CPSF1-214ENST00000622776 PRPF31Q8WWY3 499 aaKnown RBP26.61■■□□□ 1.85
CPSF1-214ENST00000622776 TMEM143Q96AN5 459 aa26.61■■□□□ 1.85
CPSF1-214ENST00000622776 CEP170P1Q96L14 293 aa26.61■■□□□ 1.85
CPSF1-214ENST00000622776 PHF20Q9BVI0 1012 aa26.61■■□□□ 1.85
CPSF1-214ENST00000622776 VN1R3Q9BXE9 311 aa26.61■■□□□ 1.85
CPSF1-214ENST00000622776 DHX33Q9H6R0 707 aaKnown RBP26.61■■□□□ 1.85
CPSF1-214ENST00000622776 WRAP73Q9P2S5 460 aaPredicted RBP26.61■■□□□ 1.85
CPSF1-214ENST00000622776 PPME1Q9Y570 386 aa26.61■■□□□ 1.85
CPSF1-214ENST00000622776 SRGAP2CP0DJJ0 459 aa26.6■■□□□ 1.85
CPSF1-214ENST00000622776 GCFC2P16383 781 aaKnown RBP26.6■■□□□ 1.85
CPSF1-214ENST00000622776 PPP4R3AQ6IN85 833 aa26.6■■□□□ 1.85
CPSF1-214ENST00000622776 MRPL10Q7Z7H8 261 aaKnown RBP26.6■■□□□ 1.85
CPSF1-214ENST00000622776 PSPC1Q8WXF1 523 aaKnown RBP26.6■■□□□ 1.85
CPSF1-214ENST00000622776 PDRG1Q9NUG6 133 aa26.6■■□□□ 1.85
CPSF1-214ENST00000622776 HOXA11P31270 313 aaPredicted RBP26.59■■□□□ 1.85
CPSF1-214ENST00000622776 RFC5P40937 340 aa26.59■■□□□ 1.85
CPSF1-214ENST00000622776 PTPN14Q15678 1187 aa26.59■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms