RNA–Protein interactions for RNA: ENST00000622680.1

LINC00963-214, long intergenic non-protein coding RNA 963, humanhuman

TSL 1 (best)

Gene LINC00963, Length 781 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-214ENST00000622680 CEP250Q9BV73 2442 aa12.32□□□□□ -0.44
LINC00963-214ENST00000622680 GALR2O43603 387 aaPredicted RBP12.32□□□□□ -0.44
LINC00963-214ENST00000622680 STBD1O95210 358 aa12.32□□□□□ -0.44
LINC00963-214ENST00000622680 SFPQP23246 707 aaKnown RBP eCLIP12.32□□□□□ -0.44
LINC00963-214ENST00000622680 RPS6KB1P23443 525 aa12.32□□□□□ -0.44
LINC00963-214ENST00000622680 MTHFRP42898 656 aa12.32□□□□□ -0.44
LINC00963-214ENST00000622680 PLA2G4FQ68DD2 849 aa12.32□□□□□ -0.44
LINC00963-214ENST00000622680 KIAA1841Q6NSI8 718 aa12.32□□□□□ -0.44
LINC00963-214ENST00000622680 TMC5Q6UXY8 1006 aa12.32□□□□□ -0.44
LINC00963-214ENST00000622680 RHPN2Q8IUC4 686 aa12.32□□□□□ -0.44
LINC00963-214ENST00000622680 TDRD5Q8NAT2 981 aaKnown RBP12.32□□□□□ -0.44
LINC00963-214ENST00000622680 IGSF21Q96ID5 467 aa12.32□□□□□ -0.44
LINC00963-214ENST00000622680 GCOM2Q9BZD3 368 aaPredicted RBP12.32□□□□□ -0.44
LINC00963-214ENST00000622680 NRDE2Q9H7Z3 1164 aa12.32□□□□□ -0.44
LINC00963-214ENST00000622680 LIMD1Q9UGP4 676 aa12.32□□□□□ -0.44
LINC00963-214ENST00000622680 DBR1Q9UK59 544 aaKnown RBP12.32□□□□□ -0.44
LINC00963-214ENST00000622680 COL4A3Q01955 1670 aa12.32□□□□□ -0.44
LINC00963-214ENST00000622680 IGKV6-21A0A0C4DH24 114 aa12.31□□□□□ -0.44
LINC00963-214ENST00000622680 SSBP05455 408 aaKnown RBP eCLIP12.31□□□□□ -0.44
LINC00963-214ENST00000622680 CTSAP10619 480 aa12.31□□□□□ -0.44
LINC00963-214ENST00000622680 IFNAR1P17181 557 aa12.31□□□□□ -0.44
LINC00963-214ENST00000622680 HSPA4P34932 840 aa12.31□□□□□ -0.44
LINC00963-214ENST00000622680 SLC11A1P49279 550 aa12.31□□□□□ -0.44
LINC00963-214ENST00000622680 NLRP5P59047 1200 aa12.31□□□□□ -0.44
LINC00963-214ENST00000622680 RNASELQ05823 741 aaKnown RBP12.31□□□□□ -0.44
LINC00963-214ENST00000622680 PTPN14Q15678 1187 aa12.31□□□□□ -0.44
LINC00963-214ENST00000622680 NOMO2Q5JPE7 1267 aa12.31□□□□□ -0.44
LINC00963-214ENST00000622680 CATSPER4Q7RTX7 472 aa12.31□□□□□ -0.44
LINC00963-214ENST00000622680 UBALD2Q8IYN6 164 aa12.31□□□□□ -0.44
LINC00963-214ENST00000622680 ZNF710Q8N1W2 664 aa12.31□□□□□ -0.44
LINC00963-214ENST00000622680 KCNB2Q92953 911 aa12.31□□□□□ -0.44
LINC00963-214ENST00000622680 SNX27Q96L92 541 aa12.31□□□□□ -0.44
LINC00963-214ENST00000622680 NLRP4Q96MN2 994 aa12.31□□□□□ -0.44
LINC00963-214ENST00000622680 AIFM3Q96NN9 605 aa12.31□□□□□ -0.44
LINC00963-214ENST00000622680 NIFKQ9BYG3 293 aaKnown RBP12.31□□□□□ -0.44
LINC00963-214ENST00000622680 AGXT2Q9BYV1 514 aa12.31□□□□□ -0.44
LINC00963-214ENST00000622680 BMP2KQ9NSY1 1161 aaPredicted RBP12.31□□□□□ -0.44
LINC00963-214ENST00000622680 FAM105AQ9NUU6 356 aa12.31□□□□□ -0.44
LINC00963-214ENST00000622680 DZANK1Q9NVP4 752 aa12.31□□□□□ -0.44
LINC00963-214ENST00000622680 ANK1P16157 1881 aa12.31□□□□□ -0.44
LINC00963-214ENST00000622680 OTOGLQ3ZCN5 2332 aa12.31□□□□□ -0.44
LINC00963-214ENST00000622680 DDX11L8A8MPP1 907 aa12.3□□□□□ -0.44
LINC00963-214ENST00000622680 MAFO75444 373 aaPredicted RBP12.3□□□□□ -0.44
LINC00963-214ENST00000622680 GALTP07902 379 aa12.3□□□□□ -0.44
LINC00963-214ENST00000622680 PDIA3P30101 505 aaKnown RBP12.3□□□□□ -0.44
LINC00963-214ENST00000622680 USP11P51784 963 aa12.3□□□□□ -0.44
LINC00963-214ENST00000622680 AFF1P51825 1210 aaKnown RBP12.3□□□□□ -0.44
LINC00963-214ENST00000622680 Q4G0T1 1027 aa12.3□□□□□ -0.44
LINC00963-214ENST00000622680 XKR3Q5GH77 459 aa12.3□□□□□ -0.44
LINC00963-214ENST00000622680 GLB1LQ6UWU2 654 aa12.3□□□□□ -0.44
LINC00963-214ENST00000622680 B3GNT9Q6UX72 402 aa12.3□□□□□ -0.44
LINC00963-214ENST00000622680 ANO5Q75V66 913 aa12.3□□□□□ -0.44
LINC00963-214ENST00000622680 ASCL5Q7RTU5 278 aa12.3□□□□□ -0.44
LINC00963-214ENST00000622680 DDX53Q86TM3 631 aaKnown RBP12.3□□□□□ -0.44
LINC00963-214ENST00000622680 ZNF280BQ86YH2 543 aa12.3□□□□□ -0.44
LINC00963-214ENST00000622680 TMEM87AQ8NBN3 555 aa12.3□□□□□ -0.44
LINC00963-214ENST00000622680 RDM1Q8NG50 284 aa12.3□□□□□ -0.44
LINC00963-214ENST00000622680 ETNPPLQ8TBG4 499 aa12.3□□□□□ -0.44
LINC00963-214ENST00000622680 SLC22A17Q8WUG5 538 aa12.3□□□□□ -0.44
LINC00963-214ENST00000622680 CHST12Q9NRB3 414 aa12.3□□□□□ -0.44
LINC00963-214ENST00000622680 SUCLA2Q9P2R7 463 aaPredicted RBP12.3□□□□□ -0.44
LINC00963-214ENST00000622680 PCDHA4Q9UN74 947 aa12.3□□□□□ -0.44
LINC00963-214ENST00000622680 IRAK3Q9Y616 596 aa12.3□□□□□ -0.44
LINC00963-214ENST00000622680 RALGAPA1Q6GYQ0 2036 aa12.3□□□□□ -0.44
LINC00963-214ENST00000622680 DNAH14Q0VDD8 3507 aa12.29□□□□□ -0.44
LINC00963-214ENST00000622680 SPDYE4A6NLX3 237 aa12.29□□□□□ -0.44
LINC00963-214ENST00000622680 EML1O00423 815 aa12.29□□□□□ -0.44
LINC00963-214ENST00000622680 SLC37A4O43826 429 aa12.29□□□□□ -0.44
LINC00963-214ENST00000622680 OFD1O75665 1012 aa12.29□□□□□ -0.44
LINC00963-214ENST00000622680 DNM2P50570 870 aa12.29□□□□□ -0.44
LINC00963-214ENST00000622680 RAB27AP51159 221 aa12.29□□□□□ -0.44
LINC00963-214ENST00000622680 POLGP54098 1239 aaPredicted RBP12.29□□□□□ -0.44
LINC00963-214ENST00000622680 NPEPPSP55786 919 aa12.29□□□□□ -0.44
LINC00963-214ENST00000622680 TOB2Q14106 344 aaPredicted RBP12.29□□□□□ -0.44
LINC00963-214ENST00000622680 BMS1Q14692 1282 aaKnown RBP12.29□□□□□ -0.44
LINC00963-214ENST00000622680 NPY5RQ15761 445 aa12.29□□□□□ -0.44
LINC00963-214ENST00000622680 CWF19L1Q69YN2 538 aaKnown RBP12.29□□□□□ -0.44
LINC00963-214ENST00000622680 AGMOQ6ZNB7 445 aa12.29□□□□□ -0.44
LINC00963-214ENST00000622680 CENPQQ7L2Z9 268 aaPredicted RBP12.29□□□□□ -0.44
LINC00963-214ENST00000622680 CABP7Q86V35 215 aa12.29□□□□□ -0.44
LINC00963-214ENST00000622680 ZNF410Q86VK4 478 aa12.29□□□□□ -0.44
LINC00963-214ENST00000622680 ZDHHC14Q8IZN3 488 aa12.29□□□□□ -0.44
LINC00963-214ENST00000622680 ZNF579Q8NAF0 562 aaKnown RBP12.29□□□□□ -0.44
LINC00963-214ENST00000622680 LARP6Q9BRS8 491 aaKnown RBP12.29□□□□□ -0.44
LINC00963-214ENST00000622680 TRAIPQ9BWF2 469 aa12.29□□□□□ -0.44
LINC00963-214ENST00000622680 MFSD1Q9H3U5 465 aa12.29□□□□□ -0.44
LINC00963-214ENST00000622680 MINDY3Q9H8M7 445 aa12.29□□□□□ -0.44
LINC00963-214ENST00000622680 SFXN1Q9H9B4 322 aa12.29□□□□□ -0.44
LINC00963-214ENST00000622680 IFT122Q9HBG6 1241 aa12.29□□□□□ -0.44
LINC00963-214ENST00000622680 SH3GLB2Q9NR46 395 aa12.29□□□□□ -0.44
LINC00963-214ENST00000622680 PRR23AA6NEV1 266 aa12.28□□□□□ -0.44
LINC00963-214ENST00000622680 M0R2N6 131 aa12.28□□□□□ -0.44
LINC00963-214ENST00000622680 DTNBO60941 627 aa12.28□□□□□ -0.44
LINC00963-214ENST00000622680 DDHD2O94830 711 aa12.28□□□□□ -0.44
LINC00963-214ENST00000622680 CNPP09543 421 aaKnown RBP12.28□□□□□ -0.44
LINC00963-214ENST00000622680 INF2Q27J81 1249 aa12.28□□□□□ -0.44
LINC00963-214ENST00000622680 ATAT1Q5SQI0 421 aa12.28□□□□□ -0.44
LINC00963-214ENST00000622680 ASTLQ6HA08 431 aaPredicted RBP12.28□□□□□ -0.44
LINC00963-214ENST00000622680 BLIDQ8IZY5 108 aa12.28□□□□□ -0.44
LINC00963-214ENST00000622680 FBXL16Q8N461 479 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms