RNA–Protein interactions for RNA: ENST00000622645.4

TP53-227, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,653 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-227ENST00000622645 PGRMC1O00264 195 aaKnown RBP12.98□□□□□ -0.33
TP53-227ENST00000622645 HSF2BPO75031 334 aa12.98□□□□□ -0.33
TP53-227ENST00000622645 KRT14P02533 472 aa12.98□□□□□ -0.33
TP53-227ENST00000622645 TNFAIP3P21580 790 aa12.98□□□□□ -0.33
TP53-227ENST00000622645 C1orf220Q5T0J3 134 aa12.98□□□□□ -0.33
TP53-227ENST00000622645 LRRC31Q6UY01 552 aa12.98□□□□□ -0.33
TP53-227ENST00000622645 DEFB132Q7Z7B7 95 aa12.98□□□□□ -0.33
TP53-227ENST00000622645 FAM76AQ8TAV0 307 aa12.98□□□□□ -0.33
TP53-227ENST00000622645 SLC20A1Q8WUM9 679 aa12.98□□□□□ -0.33
TP53-227ENST00000622645 SH3GL2Q99962 352 aa12.98□□□□□ -0.33
TP53-227ENST00000622645 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.98□□□□□ -0.331e-6■■□□□ 12.8
TP53-227ENST00000622645 THAP2Q9H0W7 228 aa12.98□□□□□ -0.33
TP53-227ENST00000622645 TBC1D22BQ9NU19 505 aa12.98□□□□□ -0.33
TP53-227ENST00000622645 HSPBP1Q9NZL4 362 aa12.98□□□□□ -0.33
TP53-227ENST00000622645 SUCLA2Q9P2R7 463 aaPredicted RBP12.98□□□□□ -0.33
TP53-227ENST00000622645 RIPK3Q9Y572 518 aa12.98□□□□□ -0.33
TP53-227ENST00000622645 KRIT1O00522 736 aa12.98□□□□□ -0.33
TP53-227ENST00000622645 SART1O43290 800 aaKnown RBP12.98□□□□□ -0.33
TP53-227ENST00000622645 TMEM253P0C7T8 217 aa12.98□□□□□ -0.33
TP53-227ENST00000622645 ERVK-9P63128 1117 aa12.98□□□□□ -0.33
TP53-227ENST00000622645 GHRHRQ02643 423 aa12.98□□□□□ -0.33
TP53-227ENST00000622645 MYBPC2Q14324 1141 aa12.98□□□□□ -0.33
TP53-227ENST00000622645 ALS2CLQ60I27 953 aa12.98□□□□□ -0.33
TP53-227ENST00000622645 RNF207Q6ZRF8 634 aa12.98□□□□□ -0.33
TP53-227ENST00000622645 SAMD7Q7Z3H4 446 aa12.98□□□□□ -0.33
TP53-227ENST00000622645 DDX42Q86XP3 938 aaKnown RBP eCLIP12.98□□□□□ -0.33
TP53-227ENST00000622645 SYCE1Q8N0S2 351 aa12.98□□□□□ -0.33
TP53-227ENST00000622645 CTNNBL1Q8WYA6 563 aaPredicted RBP12.98□□□□□ -0.33
TP53-227ENST00000622645 JDP2Q8WYK2 163 aa12.98□□□□□ -0.33
TP53-227ENST00000622645 RFFLQ8WZ73 363 aa12.98□□□□□ -0.33
TP53-227ENST00000622645 HES6Q96HZ4 224 aa12.98□□□□□ -0.33
TP53-227ENST00000622645 PDCD2LQ9BRP1 358 aa12.98□□□□□ -0.33
TP53-227ENST00000622645 KIFC3Q9BVG8 833 aa12.98□□□□□ -0.33
TP53-227ENST00000622645 VPS33BQ9H267 617 aa12.98□□□□□ -0.33
TP53-227ENST00000622645 RPAP3Q9H6T3 665 aaPredicted RBP12.98□□□□□ -0.33
TP53-227ENST00000622645 ATP8B3O60423 1300 aa12.98□□□□□ -0.33
TP53-227ENST00000622645 GTF2BQ00403 316 aa12.97□□□□□ -0.33
TP53-227ENST00000622645 XKR9Q5GH70 373 aa12.97□□□□□ -0.33
TP53-227ENST00000622645 FAM102BQ5T8I3 360 aa12.97□□□□□ -0.33
TP53-227ENST00000622645 XXYLT1Q8NBI6 393 aa12.97□□□□□ -0.33
TP53-227ENST00000622645 KAT5Q92993 513 aa12.97□□□□□ -0.33
TP53-227ENST00000622645 RUFY1Q96T51 708 aa12.97□□□□□ -0.33
TP53-227ENST00000622645 AMFRQ9UKV5 643 aa12.97□□□□□ -0.33
TP53-227ENST00000622645 CTDP1Q9Y5B0 961 aaPredicted RBP12.97□□□□□ -0.33
TP53-227ENST00000622645 CTNND1O60716 968 aaKnown RBP12.97□□□□□ -0.33
TP53-227ENST00000622645 LYPLA2O95372 231 aa12.97□□□□□ -0.33
TP53-227ENST00000622645 CCDC172P0C7W6 258 aa12.97□□□□□ -0.33
TP53-227ENST00000622645 MAPTP10636 758 aaKnown RBP12.97□□□□□ -0.33
TP53-227ENST00000622645 NNTQ13423 1086 aa12.97□□□□□ -0.33
TP53-227ENST00000622645 HLTFQ14527 1009 aaKnown RBP eCLIP12.97□□□□□ -0.33
TP53-227ENST00000622645 KIF22Q14807 665 aa12.97□□□□□ -0.33
TP53-227ENST00000622645 TTMPQ5BVD1 217 aa12.97□□□□□ -0.33
TP53-227ENST00000622645 DNAJC21Q5F1R6 531 aaKnown RBP12.97□□□□□ -0.33
TP53-227ENST00000622645 C4orf19Q8IY42 314 aa12.97□□□□□ -0.33
TP53-227ENST00000622645 IQCKQ8N0W5 287 aa12.97□□□□□ -0.33
TP53-227ENST00000622645 ATG4CQ96DT6 458 aa12.97□□□□□ -0.33
TP53-227ENST00000622645 PXMP2Q9NR77 195 aa12.97□□□□□ -0.33
TP53-227ENST00000622645 AMACRQ9UHK6 382 aa12.97□□□□□ -0.33
TP53-227ENST00000622645 FZD1Q9UP38 647 aa12.97□□□□□ -0.33
TP53-227ENST00000622645 COG5Q9UP83 839 aa12.97□□□□□ -0.33
TP53-227ENST00000622645 CCDC169A6NNP5 214 aa12.96□□□□□ -0.33
TP53-227ENST00000622645 OPA1O60313 960 aa12.96□□□□□ -0.33
TP53-227ENST00000622645 USP8P40818 1118 aa12.96□□□□□ -0.33
TP53-227ENST00000622645 SOX10P56693 466 aa12.96□□□□□ -0.33
TP53-227ENST00000622645 PSMC5P62195 406 aa12.96□□□□□ -0.33
TP53-227ENST00000622645 PPATQ06203 517 aa12.96□□□□□ -0.33
TP53-227ENST00000622645 BAATQ14032 418 aaPredicted RBP12.96□□□□□ -0.33
TP53-227ENST00000622645 SKIDA1Q1XH10 827 aa12.96□□□□□ -0.33
TP53-227ENST00000622645 ARHGEF16Q5VV41 709 aa12.96□□□□□ -0.33
TP53-227ENST00000622645 KCTD16Q68DU8 428 aa12.96□□□□□ -0.33
TP53-227ENST00000622645 AGPAT1Q99943 283 aa12.96□□□□□ -0.33
TP53-227ENST00000622645 ACP6Q9NPH0 428 aa12.96□□□□□ -0.33
TP53-227ENST00000622645 PIM2Q9P1W9 311 aa12.96□□□□□ -0.33
TP53-227ENST00000622645 TCEAL9Q9UHQ7 104 aa12.96□□□□□ -0.33
TP53-227ENST00000622645 NR2E1Q9Y466 385 aa12.96□□□□□ -0.33
TP53-227ENST00000622645 NCANO14594 1321 aa12.96□□□□□ -0.33
TP53-227ENST00000622645 ADRB2P07550 413 aa12.96□□□□□ -0.33
TP53-227ENST00000622645 ECHS1P30084 290 aa12.96□□□□□ -0.33
TP53-227ENST00000622645 ADSSP30520 456 aa12.96□□□□□ -0.33
TP53-227ENST00000622645 IRX5P78411 483 aaPredicted RBP12.96□□□□□ -0.33
TP53-227ENST00000622645 CETN1Q12798 172 aa12.96□□□□□ -0.33
TP53-227ENST00000622645 PPFIA1Q13136 1202 aa12.96□□□□□ -0.33
TP53-227ENST00000622645 ALCAMQ13740 583 aa12.96□□□□□ -0.33
TP53-227ENST00000622645 TNFAIP1Q13829 316 aa12.96□□□□□ -0.33
TP53-227ENST00000622645 EPC2Q52LR7 807 aa12.96□□□□□ -0.33
TP53-227ENST00000622645 CFAP58Q5T655 872 aa12.96□□□□□ -0.33
TP53-227ENST00000622645 NBPF12Q5TAG4 269 aaPredicted RBP12.96□□□□□ -0.33
TP53-227ENST00000622645 ZNF746Q6NUN9 644 aaPredicted RBP12.96□□□□□ -0.33
TP53-227ENST00000622645 POTEAQ6S8J7 498 aa12.96□□□□□ -0.33
TP53-227ENST00000622645 CBWD2Q8IUF1 395 aa12.96□□□□□ -0.33
TP53-227ENST00000622645 RASGEF1CQ8N431 466 aa12.96□□□□□ -0.33
TP53-227ENST00000622645 PIK3R5Q8WYR1 880 aa12.96□□□□□ -0.33
TP53-227ENST00000622645 CCDC127Q96BQ5 260 aa12.96□□□□□ -0.33
TP53-227ENST00000622645 SAAL1Q96ER3 474 aa12.96□□□□□ -0.33
TP53-227ENST00000622645 CALR3Q96L12 384 aaKnown RBP12.96□□□□□ -0.33
TP53-227ENST00000622645 TMEM117Q9H0C3 514 aa12.96□□□□□ -0.33
TP53-227ENST00000622645 TAOK3Q9H2K8 898 aa12.96□□□□□ -0.33
TP53-227ENST00000622645 TAF1DQ9H5J8 278 aaPredicted RBP12.96□□□□□ -0.33
TP53-227ENST00000622645 CHORDC1Q9UHD1 332 aaPredicted RBP12.96□□□□□ -0.33
TP53-227ENST00000622645 RGPD3A6NKT7 1758 aaPredicted RBP12.96□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms