RNA–Protein interactions for RNA: ENST00000622183.1

CPNE3-213, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 156 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-213ENST00000622183 OSBPL6Q9BZF3 934 aa6.3□□□□□ -1.4
CPNE3-213ENST00000622183 DDX21Q9NR30 783 aaKnown RBP eCLIP6.3□□□□□ -1.4
CPNE3-213ENST00000622183 MAN1C1Q9NR34 630 aa6.3□□□□□ -1.4
CPNE3-213ENST00000622183 POLR3BQ9NW08 1133 aaPredicted RBP6.3□□□□□ -1.4
CPNE3-213ENST00000622183 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.3□□□□□ -1.4
CPNE3-213ENST00000622183 LIMCH1Q9UPQ0 1083 aa6.3□□□□□ -1.4
CPNE3-213ENST00000622183 DNM3Q9UQ16 869 aa6.3□□□□□ -1.4
CPNE3-213ENST00000622183 FXR1P51114 621 aaKnown RBP eCLIP6.29□□□□□ -1.4
CPNE3-213ENST00000622183 ANTXR2P58335 489 aa6.29□□□□□ -1.4
CPNE3-213ENST00000622183 BIRC2Q13490 618 aa6.29□□□□□ -1.4
CPNE3-213ENST00000622183 PGS1Q32NB8 556 aa6.29□□□□□ -1.4
CPNE3-213ENST00000622183 TMEM132EQ6IEE7 984 aa6.29□□□□□ -1.4
CPNE3-213ENST00000622183 KLHDC10Q6PID8 442 aa6.29□□□□□ -1.4
CPNE3-213ENST00000622183 LMBR1LQ6UX01 489 aa6.29□□□□□ -1.4
CPNE3-213ENST00000622183 OTOP2Q7RTS6 562 aa6.29□□□□□ -1.4
CPNE3-213ENST00000622183 BCL6BQ8N143 479 aaPredicted RBP6.29□□□□□ -1.4
CPNE3-213ENST00000622183 ZBTB34Q8NCN2 500 aa6.29□□□□□ -1.4
CPNE3-213ENST00000622183 PJA1Q8NG27 643 aa6.29□□□□□ -1.4
CPNE3-213ENST00000622183 SVIPQ8NHG7 77 aa6.29□□□□□ -1.4
CPNE3-213ENST00000622183 NRG4Q8WWG1 115 aa6.29□□□□□ -1.4
CPNE3-213ENST00000622183 NOX5Q96PH1 765 aa6.29□□□□□ -1.4
CPNE3-213ENST00000622183 RPS6KC1Q96S38 1066 aa6.29□□□□□ -1.4
CPNE3-213ENST00000622183 ACO2Q99798 780 aaKnown RBP6.29□□□□□ -1.4
CPNE3-213ENST00000622183 ADI1Q9BV57 179 aa6.29□□□□□ -1.4
CPNE3-213ENST00000622183 DMRT3Q9NQL9 472 aa6.29□□□□□ -1.4
CPNE3-213ENST00000622183 CHST12Q9NRB3 414 aa6.29□□□□□ -1.4
CPNE3-213ENST00000622183 SAE1Q9UBE0 346 aaPredicted RBP6.29□□□□□ -1.4
CPNE3-213ENST00000622183 CROTQ9UKG9 612 aa6.29□□□□□ -1.4
CPNE3-213ENST00000622183 A0A0G2JNJ9 132 aa6.28□□□□□ -1.4
CPNE3-213ENST00000622183 H0Y858 1186 aa6.28□□□□□ -1.4
CPNE3-213ENST00000622183 TPD52L2O43399 206 aaKnown RBP6.28□□□□□ -1.4
CPNE3-213ENST00000622183 COL6A1P12109 1028 aa6.28□□□□□ -1.4
CPNE3-213ENST00000622183 GSPT1P15170 499 aaKnown RBP6.28□□□□□ -1.4
CPNE3-213ENST00000622183 ADCY8P40145 1251 aa6.28□□□□□ -1.4
CPNE3-213ENST00000622183 USP14P54578 494 aa6.28□□□□□ -1.4
CPNE3-213ENST00000622183 MEF2AQ02078 507 aaPredicted RBP6.28□□□□□ -1.4
CPNE3-213ENST00000622183 PPP3CAQ08209 521 aa6.28□□□□□ -1.4
CPNE3-213ENST00000622183 MGAT5Q09328 741 aa6.28□□□□□ -1.4
CPNE3-213ENST00000622183 MGAT2Q10469 447 aa6.28□□□□□ -1.4
CPNE3-213ENST00000622183 MAN2A1Q16706 1144 aa6.28□□□□□ -1.4
CPNE3-213ENST00000622183 GJC2Q5T442 439 aaPredicted RBP6.28□□□□□ -1.4
CPNE3-213ENST00000622183 SYCP2LQ5T4T6 812 aa6.28□□□□□ -1.4
CPNE3-213ENST00000622183 SRGAP1Q7Z6B7 1085 aa6.28□□□□□ -1.4
CPNE3-213ENST00000622183 DENND1CQ8IV53 801 aa6.28□□□□□ -1.4
CPNE3-213ENST00000622183 FAM43AQ8N2R8 423 aa6.28□□□□□ -1.4
CPNE3-213ENST00000622183 SAMD3Q8N6K7 520 aa6.28□□□□□ -1.4
CPNE3-213ENST00000622183 MARCH10Q8NA82 808 aaPredicted RBP6.28□□□□□ -1.4
CPNE3-213ENST00000622183 HDAC10Q969S8 669 aa6.28□□□□□ -1.4
CPNE3-213ENST00000622183 WDR92Q96MX6 357 aa6.28□□□□□ -1.4
CPNE3-213ENST00000622183 PSMD1Q99460 953 aa6.28□□□□□ -1.4
CPNE3-213ENST00000622183 SGPP1Q9BX95 441 aa6.28□□□□□ -1.4
CPNE3-213ENST00000622183 FAM204AQ9H8W3 233 aa6.28□□□□□ -1.4
CPNE3-213ENST00000622183 GCM1Q9NP62 436 aa6.28□□□□□ -1.4
CPNE3-213ENST00000622183 RBM12Q9NTZ6 932 aaKnown RBP6.28□□□□□ -1.4
CPNE3-213ENST00000622183 Q9UFV3 132 aa6.28□□□□□ -1.4
CPNE3-213ENST00000622183 INTUQ9ULD6 942 aa6.28□□□□□ -1.4
CPNE3-213ENST00000622183 A0A1W2PR48 441 aa6.27□□□□□ -1.41
CPNE3-213ENST00000622183 ANO9A1A5B4 782 aa6.27□□□□□ -1.41
CPNE3-213ENST00000622183 TMEM127O75204 238 aa6.27□□□□□ -1.41
CPNE3-213ENST00000622183 HRGP04196 525 aa6.27□□□□□ -1.41
CPNE3-213ENST00000622183 PHKG2P15735 406 aa6.27□□□□□ -1.41
CPNE3-213ENST00000622183 RHCEP18577 417 aa6.27□□□□□ -1.41
CPNE3-213ENST00000622183 LIMS1P48059 325 aa6.27□□□□□ -1.41
CPNE3-213ENST00000622183 RHDQ02161 417 aa6.27□□□□□ -1.41
CPNE3-213ENST00000622183 EIF4HQ15056 248 aaKnown RBP6.27□□□□□ -1.41
CPNE3-213ENST00000622183 C3orf36Q3SXR2 165 aa6.27□□□□□ -1.41
CPNE3-213ENST00000622183 OVCH2Q7RTZ1 564 aa6.27□□□□□ -1.41
CPNE3-213ENST00000622183 NKD2Q969F2 451 aaPredicted RBP6.27□□□□□ -1.41
CPNE3-213ENST00000622183 ZBTB8AQ96BR9 441 aa6.27□□□□□ -1.41
CPNE3-213ENST00000622183 TMEM60Q9H2L4 133 aa6.27□□□□□ -1.41
CPNE3-213ENST00000622183 KCNK12Q9HB15 430 aa6.27□□□□□ -1.41
CPNE3-213ENST00000622183 DNAI1Q9UI46 699 aa6.27□□□□□ -1.41
CPNE3-213ENST00000622183 CFAP20Q9Y6A4 193 aaKnown RBP6.27□□□□□ -1.41
CPNE3-213ENST00000622183 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.27□□□□□ -1.41
CPNE3-213ENST00000622183 PLEKHD1A6NEE1 506 aa6.26□□□□□ -1.41
CPNE3-213ENST00000622183 A6NNZ2 444 aa6.26□□□□□ -1.41
CPNE3-213ENST00000622183 FAM171A2A8MVW0 826 aa6.26□□□□□ -1.41
CPNE3-213ENST00000622183 TUSC2O75896 110 aa6.26□□□□□ -1.41
CPNE3-213ENST00000622183 FSBPO95073 299 aa6.26□□□□□ -1.41
CPNE3-213ENST00000622183 LY86O95711 162 aa6.26□□□□□ -1.41
CPNE3-213ENST00000622183 ZBED1O96006 694 aa6.26□□□□□ -1.41
CPNE3-213ENST00000622183 NBPF7P0C2Y1 421 aaPredicted RBP6.26□□□□□ -1.41
CPNE3-213ENST00000622183 MLLT6P55198 1093 aaPredicted RBP6.26□□□□□ -1.41
CPNE3-213ENST00000622183 BRD3Q15059 726 aa6.26□□□□□ -1.41
CPNE3-213ENST00000622183 SAFBQ15424 915 aaKnown RBP eCLIP6.26□□□□□ -1.41
CPNE3-213ENST00000622183 MLANAQ16655 118 aa6.26□□□□□ -1.41
CPNE3-213ENST00000622183 PRR31Q5SQ13 230 aa6.26□□□□□ -1.41
CPNE3-213ENST00000622183 FAM180AQ6UWF9 173 aa6.26□□□□□ -1.41
CPNE3-213ENST00000622183 MIGA2Q7L4E1 593 aa6.26□□□□□ -1.41
CPNE3-213ENST00000622183 CAMKK1Q8N5S9 505 aa6.26□□□□□ -1.41
CPNE3-213ENST00000622183 GPR156Q8NFN8 814 aa6.26□□□□□ -1.41
CPNE3-213ENST00000622183 PPP1R35Q8TAP8 253 aa6.26□□□□□ -1.41
CPNE3-213ENST00000622183 RIN2Q8WYP3 895 aaPredicted RBP6.26□□□□□ -1.41
CPNE3-213ENST00000622183 ZCCHC14Q8WYQ9 949 aaKnown RBP6.26□□□□□ -1.41
CPNE3-213ENST00000622183 DPF2Q92785 391 aa6.26□□□□□ -1.41
CPNE3-213ENST00000622183 POLR3GLQ9BT43 218 aa6.26□□□□□ -1.41
CPNE3-213ENST00000622183 USP25Q9UHP3 1055 aa6.26□□□□□ -1.41
CPNE3-213ENST00000622183 MAGEL2Q9UJ55 1249 aa6.26□□□□□ -1.41
CPNE3-213ENST00000622183 RIPOR2Q9Y4F9 1068 aa6.26□□□□□ -1.41
CPNE3-213ENST00000622183 LRRC10BA6NIK2 292 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms