RNA–Protein interactions for RNA: ENST00000622044.1

PCDHGA11-203, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGA11, Length 3,633 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-203ENST00000622044 KCPQ6ZWJ8 1503 aa12.26□□□□□ -0.45
PCDHGA11-203ENST00000622044 MARF1Q9Y4F3 1742 aaKnown RBP12.26□□□□□ -0.45
PCDHGA11-203ENST00000622044 COMTP21964 271 aa12.25□□□□□ -0.45
PCDHGA11-203ENST00000622044 GSCP56915 257 aaPredicted RBP12.25□□□□□ -0.45
PCDHGA11-203ENST00000622044 SLMAPQ14BN4 828 aa12.25□□□□□ -0.45
PCDHGA11-203ENST00000622044 RUNDC3BQ96NL0 473 aa12.25□□□□□ -0.45
PCDHGA11-203ENST00000622044 TTC7AQ9ULT0 858 aaPredicted RBP12.25□□□□□ -0.45
PCDHGA11-203ENST00000622044 COL1A1P02452 1464 aaPredicted RBP12.25□□□□□ -0.45
PCDHGA11-203ENST00000622044 SYNGAP1Q96PV0 1343 aa12.25□□□□□ -0.45
PCDHGA11-203ENST00000622044 AKAP11Q9UKA4 1901 aa12.25□□□□□ -0.45
PCDHGA11-203ENST00000622044 M0R2N6 131 aa12.25□□□□□ -0.45
PCDHGA11-203ENST00000622044 ALDH3A1P30838 453 aa12.25□□□□□ -0.45
PCDHGA11-203ENST00000622044 RPL21P46778 160 aaKnown RBP12.25□□□□□ -0.45
PCDHGA11-203ENST00000622044 ALDH5A1P51649 535 aaPredicted RBP12.25□□□□□ -0.45
PCDHGA11-203ENST00000622044 MXRA7P84157 204 aa12.25□□□□□ -0.45
PCDHGA11-203ENST00000622044 ERMARDQ5T6L9 678 aa12.25□□□□□ -0.45
PCDHGA11-203ENST00000622044 HHATQ5VTY9 493 aa12.25□□□□□ -0.45
PCDHGA11-203ENST00000622044 RNF207Q6ZRF8 634 aa12.25□□□□□ -0.45
PCDHGA11-203ENST00000622044 SPATA21Q7Z572 469 aa12.25□□□□□ -0.45
PCDHGA11-203ENST00000622044 ZC3H12CQ9C0D7 883 aaKnown RBP12.25□□□□□ -0.45
PCDHGA11-203ENST00000622044 CD209Q9NNX6 404 aa12.25□□□□□ -0.45
PCDHGA11-203ENST00000622044 SPATS2LQ9NUQ6 558 aaKnown RBP12.25□□□□□ -0.45
PCDHGA11-203ENST00000622044 AJAP1Q9UKB5 411 aaPredicted RBP12.25□□□□□ -0.45
PCDHGA11-203ENST00000622044 PNMA3Q9UL41 463 aa12.25□□□□□ -0.45
PCDHGA11-203ENST00000622044 MYH7P12883 1935 aa12.25□□□□□ -0.45
PCDHGA11-203ENST00000622044 ZBTB39O15060 712 aa12.25□□□□□ -0.45
PCDHGA11-203ENST00000622044 EDRF1Q3B7T1 1238 aa12.25□□□□□ -0.45
PCDHGA11-203ENST00000622044 C16orf86Q6ZW13 317 aa12.25□□□□□ -0.45
PCDHGA11-203ENST00000622044 MXD3Q9BW11 206 aa12.25□□□□□ -0.45
PCDHGA11-203ENST00000622044 KIF9Q9HAQ2 790 aa12.25□□□□□ -0.45
PCDHGA11-203ENST00000622044 PARVGQ9HBI0 331 aa12.25□□□□□ -0.45
PCDHGA11-203ENST00000622044 TRPC6Q9Y210 931 aa12.25□□□□□ -0.45
PCDHGA11-203ENST00000622044 RASA4BC9J798 803 aa12.24□□□□□ -0.45
PCDHGA11-203ENST00000622044 FOXN3O00409 490 aaPredicted RBP12.24□□□□□ -0.45
PCDHGA11-203ENST00000622044 RASA4O43374 803 aa12.24□□□□□ -0.45
PCDHGA11-203ENST00000622044 SMIM24O75264 130 aa12.24□□□□□ -0.45
PCDHGA11-203ENST00000622044 AGTP01019 485 aa12.24□□□□□ -0.45
PCDHGA11-203ENST00000622044 ATF7P17544 494 aaPredicted RBP12.24□□□□□ -0.45
PCDHGA11-203ENST00000622044 FMO5P49326 533 aa12.24□□□□□ -0.45
PCDHGA11-203ENST00000622044 KRT17Q04695 432 aa12.24□□□□□ -0.45
PCDHGA11-203ENST00000622044 ZNF543Q08ER8 600 aa12.24□□□□□ -0.45
PCDHGA11-203ENST00000622044 CROCCP2Q86T23 111 aa12.24□□□□□ -0.45
PCDHGA11-203ENST00000622044 FBXO11Q86XK2 927 aa12.24□□□□□ -0.45
PCDHGA11-203ENST00000622044 LMNTD2Q8IXW0 634 aa12.24□□□□□ -0.45
PCDHGA11-203ENST00000622044 CYP2W1Q8TAV3 490 aa12.24□□□□□ -0.45
PCDHGA11-203ENST00000622044 P3H4Q92791 437 aa12.24□□□□□ -0.45
PCDHGA11-203ENST00000622044 BICD1Q96G01 975 aa12.24□□□□□ -0.45
PCDHGA11-203ENST00000622044 NAP1L4Q99733 375 aaKnown RBP12.24□□□□□ -0.45
PCDHGA11-203ENST00000622044 KDM4CQ9H3R0 1056 aa12.24□□□□□ -0.45
PCDHGA11-203ENST00000622044 ANAPC5Q9UJX4 755 aa12.24□□□□□ -0.45
PCDHGA11-203ENST00000622044 CCNL1Q9UK58 526 aaPredicted RBP12.24□□□□□ -0.45
PCDHGA11-203ENST00000622044 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.24□□□□□ -0.45
PCDHGA11-203ENST00000622044 DISP2A7MBM2 1401 aa12.24□□□□□ -0.45
PCDHGA11-203ENST00000622044 RBAK-RBAKDNI3L0D1 243 aa12.24□□□□□ -0.45
PCDHGA11-203ENST00000622044 NQO1P15559 274 aaKnown RBP12.24□□□□□ -0.45
PCDHGA11-203ENST00000622044 HSPA1LP34931 641 aa12.24□□□□□ -0.45
PCDHGA11-203ENST00000622044 EPC2Q52LR7 807 aa12.24□□□□□ -0.45
PCDHGA11-203ENST00000622044 GPATCH4Q5T3I0 446 aaKnown RBP12.24□□□□□ -0.45
PCDHGA11-203ENST00000622044 RFX8Q6ZV50 586 aa12.24□□□□□ -0.45
PCDHGA11-203ENST00000622044 PALB2Q86YC2 1186 aa12.24□□□□□ -0.45
PCDHGA11-203ENST00000622044 CCT6BQ92526 530 aa12.24□□□□□ -0.45
PCDHGA11-203ENST00000622044 ALG3Q92685 438 aa12.24□□□□□ -0.45
PCDHGA11-203ENST00000622044 ZNF622Q969S3 477 aaKnown RBP eCLIP12.24□□□□□ -0.45
PCDHGA11-203ENST00000622044 IGSF9BQ9UPX0 1349 aa12.24□□□□□ -0.45
PCDHGA11-203ENST00000622044 PODXLO00592 558 aa12.24□□□□□ -0.45
PCDHGA11-203ENST00000622044 PDXKO00764 312 aa12.24□□□□□ -0.45
PCDHGA11-203ENST00000622044 ATP2A2P16615 1042 aaKnown RBP12.24□□□□□ -0.45
PCDHGA11-203ENST00000622044 CHRNA3P32297 505 aa12.24□□□□□ -0.45
PCDHGA11-203ENST00000622044 PTENP60484 403 aa12.24□□□□□ -0.45
PCDHGA11-203ENST00000622044 BIRC2Q13490 618 aa12.24□□□□□ -0.45
PCDHGA11-203ENST00000622044 GIT2Q14161 759 aa12.24□□□□□ -0.45
PCDHGA11-203ENST00000622044 TMEM119Q4V9L6 283 aa12.24□□□□□ -0.45
PCDHGA11-203ENST00000622044 SLC35C1Q96A29 364 aa12.24□□□□□ -0.45
PCDHGA11-203ENST00000622044 RNF25Q96BH1 459 aaPredicted RBP12.24□□□□□ -0.45
PCDHGA11-203ENST00000622044 HAUS1Q96CS2 278 aa12.24□□□□□ -0.45
PCDHGA11-203ENST00000622044 PWWP2AQ96N64 755 aa12.24□□□□□ -0.45
PCDHGA11-203ENST00000622044 NUP85Q9BW27 656 aa12.24□□□□□ -0.45
PCDHGA11-203ENST00000622044 DCTN4Q9UJW0 460 aa12.24□□□□□ -0.45
PCDHGA11-203ENST00000622044 SERPINA10Q9UK55 444 aa12.24□□□□□ -0.45
PCDHGA11-203ENST00000622044 CTDP1Q9Y5B0 961 aaPredicted RBP12.24□□□□□ -0.45
PCDHGA11-203ENST00000622044 FAM187AA6NFU0 413 aa12.23□□□□□ -0.45
PCDHGA11-203ENST00000622044 PHF2O75151 1096 aa12.23□□□□□ -0.45
PCDHGA11-203ENST00000622044 CREB1P16220 341 aa12.23□□□□□ -0.45
PCDHGA11-203ENST00000622044 CETN2P41208 172 aa12.23□□□□□ -0.45
PCDHGA11-203ENST00000622044 RAD23BP54727 409 aa12.23□□□□□ -0.45
PCDHGA11-203ENST00000622044 DHX34Q14147 1143 aaKnown RBP12.23□□□□□ -0.45
PCDHGA11-203ENST00000622044 LNX1Q8TBB1 728 aaPredicted RBP12.23□□□□□ -0.45
PCDHGA11-203ENST00000622044 ERP27Q96DN0 273 aa12.23□□□□□ -0.45
PCDHGA11-203ENST00000622044 SAAL1Q96ER3 474 aa12.23□□□□□ -0.45
PCDHGA11-203ENST00000622044 DYDC2Q96IM9 177 aa12.23□□□□□ -0.45
PCDHGA11-203ENST00000622044 MTFR1LQ9H019 292 aa12.23□□□□□ -0.45
PCDHGA11-203ENST00000622044 ATP6V0A4Q9HBG4 840 aa12.23□□□□□ -0.45
PCDHGA11-203ENST00000622044 TNS2Q63HR2 1409 aa12.23□□□□□ -0.45
PCDHGA11-203ENST00000622044 EMSYQ7Z589 1322 aa12.23□□□□□ -0.45
PCDHGA11-203ENST00000622044 CFAP73A6NFT4 308 aa12.23□□□□□ -0.45
PCDHGA11-203ENST00000622044 TARSP26639 723 aaKnown RBP12.23□□□□□ -0.45
PCDHGA11-203ENST00000622044 GPC5P78333 572 aa12.23□□□□□ -0.45
PCDHGA11-203ENST00000622044 ZNF564Q8TBZ8 553 aaPredicted RBP12.23□□□□□ -0.45
PCDHGA11-203ENST00000622044 CARD9Q9H257 536 aa12.23□□□□□ -0.45
PCDHGA11-203ENST00000622044 ANAPC7Q9UJX3 599 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms