RNA–Protein interactions for RNA: ENST00000621990.4

PDPN-212, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDPN, Length 2,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-212ENST00000621990 ZNF280AP59817 542 aaPredicted RBP10.23□□□□□ -0.77
PDPN-212ENST00000621990 ERVK-9P63128 1117 aa10.23□□□□□ -0.77
PDPN-212ENST00000621990 DLG4P78352 724 aa10.23□□□□□ -0.77
PDPN-212ENST00000621990 DAAM2Q86T65 1068 aa10.23□□□□□ -0.77
PDPN-212ENST00000621990 ZIM3Q96PE6 472 aa10.23□□□□□ -0.77
PDPN-212ENST00000621990 SLITRK6Q9H5Y7 841 aa10.23□□□□□ -0.77
PDPN-212ENST00000621990 PPP1R9AQ9ULJ8 1098 aa10.23□□□□□ -0.77
PDPN-212ENST00000621990 RLFQ13129 1914 aa10.23□□□□□ -0.77
PDPN-212ENST00000621990 IGSF9BQ9UPX0 1349 aa10.23□□□□□ -0.77
PDPN-212ENST00000621990 DOCK1Q14185 1865 aa10.23□□□□□ -0.77
PDPN-212ENST00000621990 DDX3YO15523 660 aaKnown RBP10.23□□□□□ -0.77
PDPN-212ENST00000621990 KRT13P13646 458 aa10.23□□□□□ -0.77
PDPN-212ENST00000621990 EN1Q05925 392 aaPredicted RBP10.23□□□□□ -0.77
PDPN-212ENST00000621990 PPP3CAQ08209 521 aa10.23□□□□□ -0.77
PDPN-212ENST00000621990 RASA3Q14644 834 aa10.23□□□□□ -0.77
PDPN-212ENST00000621990 PGM5Q15124 567 aa10.23□□□□□ -0.77
PDPN-212ENST00000621990 TTMPQ5BVD1 217 aa10.23□□□□□ -0.77
PDPN-212ENST00000621990 PDGFDQ9GZP0 370 aaPredicted RBP10.23□□□□□ -0.77
PDPN-212ENST00000621990 OSGEPQ9NPF4 335 aa10.23□□□□□ -0.77
PDPN-212ENST00000621990 ARID2Q68CP9 1835 aa10.22□□□□□ -0.77
PDPN-212ENST00000621990 EMSYQ7Z589 1322 aa10.22□□□□□ -0.77
PDPN-212ENST00000621990 ANKRD62A6NC57 917 aa10.22□□□□□ -0.77
PDPN-212ENST00000621990 FOXN3O00409 490 aaPredicted RBP10.22□□□□□ -0.77
PDPN-212ENST00000621990 SART1O43290 800 aaKnown RBP10.22□□□□□ -0.77
PDPN-212ENST00000621990 CTNND1O60716 968 aaKnown RBP10.22□□□□□ -0.77
PDPN-212ENST00000621990 SFNP31947 248 aa10.22□□□□□ -0.77
PDPN-212ENST00000621990 JAK3P52333 1124 aa10.22□□□□□ -0.77
PDPN-212ENST00000621990 RPS6P62753 249 aaKnown RBP10.22□□□□□ -0.77
PDPN-212ENST00000621990 SKOR1P84550 965 aa10.22□□□□□ -0.77
PDPN-212ENST00000621990 UGCGQ16739 394 aa10.22□□□□□ -0.77
PDPN-212ENST00000621990 XXYLT1Q8NBI6 393 aa10.22□□□□□ -0.77
PDPN-212ENST00000621990 IFT81Q8WYA0 676 aa10.22□□□□□ -0.77
PDPN-212ENST00000621990 CTNNBL1Q8WYA6 563 aaPredicted RBP10.22□□□□□ -0.77
PDPN-212ENST00000621990 IWS1Q96ST2 819 aa10.22□□□□□ -0.77
PDPN-212ENST00000621990 AGPAT1Q99943 283 aa10.22□□□□□ -0.77
PDPN-212ENST00000621990 CBWD1Q9BRT8 395 aa10.22□□□□□ -0.77
PDPN-212ENST00000621990 ANKEF1Q9NU02 776 aa10.22□□□□□ -0.77
PDPN-212ENST00000621990 HSPBP1Q9NZL4 362 aa10.22□□□□□ -0.77
PDPN-212ENST00000621990 BRCA1P38398 1863 aaKnown RBP10.22□□□□□ -0.77
PDPN-212ENST00000621990 ZNF233A6NK53 670 aa10.22□□□□□ -0.77
PDPN-212ENST00000621990 TISP43B9A030 160 aa10.22□□□□□ -0.77
PDPN-212ENST00000621990 FDX1P10109 184 aa10.22□□□□□ -0.77
PDPN-212ENST00000621990 ALAS1P13196 640 aa10.22□□□□□ -0.77
PDPN-212ENST00000621990 RNASE9P60153 205 aaKnown RBP10.22□□□□□ -0.77
PDPN-212ENST00000621990 PSMC5P62195 406 aa10.22□□□□□ -0.77
PDPN-212ENST00000621990 POU5F1Q01860 360 aaKnown RBP10.22□□□□□ -0.77
PDPN-212ENST00000621990 CETN1Q12798 172 aa10.22□□□□□ -0.77
PDPN-212ENST00000621990 PLS1Q14651 629 aa10.22□□□□□ -0.77
PDPN-212ENST00000621990 TRADDQ15628 312 aa10.22□□□□□ -0.77
PDPN-212ENST00000621990 XRRA1Q6P2D8 792 aa10.22□□□□□ -0.77
PDPN-212ENST00000621990 HAUS6Q7Z4H7 955 aa10.22□□□□□ -0.77
PDPN-212ENST00000621990 KLHL7Q8IXQ5 586 aa10.22□□□□□ -0.77
PDPN-212ENST00000621990 RDM1Q8NG50 284 aa10.22□□□□□ -0.77
PDPN-212ENST00000621990 HVCN1Q96D96 273 aa10.22□□□□□ -0.77
PDPN-212ENST00000621990 SENP7Q9BQF6 1050 aa10.22□□□□□ -0.77
PDPN-212ENST00000621990 CARD9Q9H257 536 aa10.22□□□□□ -0.77
PDPN-212ENST00000621990 RAVER2Q9HCJ3 691 aaKnown RBP10.22□□□□□ -0.77
PDPN-212ENST00000621990 PXMP2Q9NR77 195 aa10.22□□□□□ -0.77
PDPN-212ENST00000621990 AMFRQ9UKV5 643 aa10.22□□□□□ -0.77
PDPN-212ENST00000621990 A6NNZ2 444 aa10.21□□□□□ -0.77
PDPN-212ENST00000621990 KRIT1O00522 736 aa10.21□□□□□ -0.77
PDPN-212ENST00000621990 BACH1O14867 736 aa10.21□□□□□ -0.77
PDPN-212ENST00000621990 CCNE2O96020 404 aa10.21□□□□□ -0.77
PDPN-212ENST00000621990 VCAM1P19320 739 aa10.21□□□□□ -0.77
PDPN-212ENST00000621990 KRT76Q01546 638 aa10.21□□□□□ -0.77
PDPN-212ENST00000621990 TNFAIP1Q13829 316 aa10.21□□□□□ -0.77
PDPN-212ENST00000621990 TUBB8Q3ZCM7 444 aa10.21□□□□□ -0.77
PDPN-212ENST00000621990 DCAF12L1Q5VU92 463 aa10.21□□□□□ -0.77
PDPN-212ENST00000621990 SAMD1Q6SPF0 538 aaPredicted RBP10.21□□□□□ -0.77
PDPN-212ENST00000621990 PALB2Q86YC2 1186 aa10.21□□□□□ -0.77
PDPN-212ENST00000621990 RHOT2Q8IXI1 618 aa10.21□□□□□ -0.77
PDPN-212ENST00000621990 PLEKHO2Q8TD55 490 aa10.21□□□□□ -0.77
PDPN-212ENST00000621990 ARL8AQ96BM9 186 aa10.21□□□□□ -0.77
PDPN-212ENST00000621990 ARHGEF26Q96DR7 871 aa10.21□□□□□ -0.77
PDPN-212ENST00000621990 CCDC43Q96MW1 224 aaKnown RBP10.21□□□□□ -0.77
PDPN-212ENST00000621990 TAAR1Q96RJ0 339 aa10.21□□□□□ -0.77
PDPN-212ENST00000621990 PDCD2LQ9BRP1 358 aa10.21□□□□□ -0.77
PDPN-212ENST00000621990 THAP2Q9H0W7 228 aa10.21□□□□□ -0.77
PDPN-212ENST00000621990 TAS2R14Q9NYV8 317 aa10.21□□□□□ -0.77
PDPN-212ENST00000621990 PKD2L1Q9P0L9 805 aa10.21□□□□□ -0.77
PDPN-212ENST00000621990 COG5Q9UP83 839 aa10.21□□□□□ -0.77
PDPN-212ENST00000621990 PFASO15067 1338 aa10.21□□□□□ -0.77
PDPN-212ENST00000621990 TMCO5BA8MYB1 307 aa10.21□□□□□ -0.78
PDPN-212ENST00000621990 WDR64B1ANS9 1081 aa10.21□□□□□ -0.78
PDPN-212ENST00000621990 PPFIA4O75335 1185 aa10.21□□□□□ -0.78
PDPN-212ENST00000621990 TNFAIP3P21580 790 aa10.21□□□□□ -0.78
PDPN-212ENST00000621990 ENPEPQ07075 957 aa10.21□□□□□ -0.78
PDPN-212ENST00000621990 CLUL1Q15846 466 aa10.21□□□□□ -0.78
PDPN-212ENST00000621990 CFAP58Q5T655 872 aa10.21□□□□□ -0.78
PDPN-212ENST00000621990 CIAPIN1Q6FI81 312 aa10.21□□□□□ -0.78
PDPN-212ENST00000621990 C11orf63Q6NUN7 778 aa10.21□□□□□ -0.78
PDPN-212ENST00000621990 ARHGEF19Q8IW93 802 aa10.21□□□□□ -0.78
PDPN-212ENST00000621990 RUFY1Q96T51 708 aa10.21□□□□□ -0.78
PDPN-212ENST00000621990 AP1M1Q9BXS5 423 aa10.21□□□□□ -0.78
PDPN-212ENST00000621990 PCIF1Q9H4Z3 704 aa10.21□□□□□ -0.78
PDPN-212ENST00000621990 LOC285556D6RIA3 1793 aa10.21□□□□□ -0.78
PDPN-212ENST00000621990 GRIN2DO15399 1336 aa10.21□□□□□ -0.78
PDPN-212ENST00000621990 COL11A1P12107 1806 aaPredicted RBP10.21□□□□□ -0.78
PDPN-212ENST00000621990 ATP9AO75110 1047 aa10.2□□□□□ -0.78
PDPN-212ENST00000621990 MTA2O94776 668 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms