RNA–Protein interactions for RNA: ENST00000621870.4

GGA3-223, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 1 (best)

Gene GGA3, Length 4,034 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-223ENST00000621870 M0QYV0 167 aa9.91□□□□□ -0.82
GGA3-223ENST00000621870 PDHXO00330 501 aa9.91□□□□□ -0.82
GGA3-223ENST00000621870 NDUFAB1O14561 156 aa9.91□□□□□ -0.82
GGA3-223ENST00000621870 TEX33O43247 280 aa9.91□□□□□ -0.82
GGA3-223ENST00000621870 SLURP2P0DP57 97 aa9.91□□□□□ -0.82
GGA3-223ENST00000621870 RPA1P27694 616 aa9.91□□□□□ -0.82
GGA3-223ENST00000621870 SHMT1P34896 483 aa9.91□□□□□ -0.82
GGA3-223ENST00000621870 PDE1BQ01064 536 aa9.91□□□□□ -0.82
GGA3-223ENST00000621870 GRIK5Q16478 980 aa9.91□□□□□ -0.82
GGA3-223ENST00000621870 CEP85LQ5SZL2 805 aa9.91□□□□□ -0.82
GGA3-223ENST00000621870 GLB1LQ6UWU2 654 aa9.91□□□□□ -0.82
GGA3-223ENST00000621870 CCDC121Q6ZUS5 278 aa9.91□□□□□ -0.82
GGA3-223ENST00000621870 VPS52Q8N1B4 723 aa9.91□□□□□ -0.82
GGA3-223ENST00000621870 GDAP1Q8TB36 358 aa9.91□□□□□ -0.82
GGA3-223ENST00000621870 PPP4R1Q8TF05 950 aa9.91□□□□□ -0.82
GGA3-223ENST00000621870 HSPH1Q92598 858 aa9.91□□□□□ -0.82
GGA3-223ENST00000621870 CDCA5Q96FF9 252 aa9.91□□□□□ -0.82
GGA3-223ENST00000621870 SIK2Q9H0K1 926 aa9.91□□□□□ -0.82
GGA3-223ENST00000621870 EHD4Q9H223 541 aa9.91□□□□□ -0.82
GGA3-223ENST00000621870 LMCD1Q9NZU5 365 aa9.91□□□□□ -0.82
GGA3-223ENST00000621870 ANAPC5Q9UJX4 755 aa9.91□□□□□ -0.82
GGA3-223ENST00000621870 POC1B-GALNT4F8VUJ3 575 aa9.91□□□□□ -0.82
GGA3-223ENST00000621870 MFAP3LO75121 409 aa9.91□□□□□ -0.82
GGA3-223ENST00000621870 TADA2AO75478 443 aa9.91□□□□□ -0.82
GGA3-223ENST00000621870 PLTPP55058 493 aa9.91□□□□□ -0.82
GGA3-223ENST00000621870 MTMR3Q13615 1198 aa9.91□□□□□ -0.82
GGA3-223ENST00000621870 PRPSAP1Q14558 356 aa9.91□□□□□ -0.82
GGA3-223ENST00000621870 TRIP13Q15645 432 aaPredicted RBP9.91□□□□□ -0.82
GGA3-223ENST00000621870 ANKRD40Q6AI12 368 aa9.91□□□□□ -0.82
GGA3-223ENST00000621870 TOGARAM2Q6ZUX3 1019 aa9.91□□□□□ -0.82
GGA3-223ENST00000621870 METTL16Q86W50 562 aaKnown RBP9.91□□□□□ -0.82
GGA3-223ENST00000621870 DCLK2Q8N568 766 aa9.91□□□□□ -0.82
GGA3-223ENST00000621870 PPM1EQ8WY54 764 aa9.91□□□□□ -0.82
GGA3-223ENST00000621870 P3H4Q92791 437 aa9.91□□□□□ -0.82
GGA3-223ENST00000621870 MROH8Q9H579 483 aa9.91□□□□□ -0.82
GGA3-223ENST00000621870 CDC23Q9UJX2 597 aa9.91□□□□□ -0.82
GGA3-223ENST00000621870 PGRMC1O00264 195 aaKnown RBP9.91□□□□□ -0.82
GGA3-223ENST00000621870 PFDN6O15212 129 aa9.91□□□□□ -0.82
GGA3-223ENST00000621870 TRAPPC3O43617 180 aa9.91□□□□□ -0.82
GGA3-223ENST00000621870 ZRANB2O95218 330 aaKnown RBP eCLIP9.91□□□□□ -0.82
GGA3-223ENST00000621870 SMARCA1P28370 1054 aa9.91□□□□□ -0.82
GGA3-223ENST00000621870 SLC30A10Q6XR72 485 aa9.91□□□□□ -0.82
GGA3-223ENST00000621870 RASGRP2Q7LDG7 609 aa9.91□□□□□ -0.82
GGA3-223ENST00000621870 CROCCP2Q86T23 111 aa9.91□□□□□ -0.82
GGA3-223ENST00000621870 MYLK4Q86YV6 388 aaPredicted RBP9.91□□□□□ -0.82
GGA3-223ENST00000621870 ZNF560Q96MR9 790 aa9.91□□□□□ -0.82
GGA3-223ENST00000621870 P2RX7Q99572 595 aaKnown RBP9.91□□□□□ -0.82
GGA3-223ENST00000621870 PCDHA13Q9Y5I0 950 aa9.91□□□□□ -0.82
GGA3-223ENST00000621870 ZBED1O96006 694 aa9.9□□□□□ -0.82
GGA3-223ENST00000621870 GNA15P30679 374 aa9.9□□□□□ -0.82
GGA3-223ENST00000621870 SDC4P31431 198 aa9.9□□□□□ -0.82
GGA3-223ENST00000621870 PHBP35232 272 aa9.9□□□□□ -0.82
GGA3-223ENST00000621870 CLCN3P51790 818 aa9.9□□□□□ -0.82
GGA3-223ENST00000621870 PSMC1P62191 440 aaKnown RBP9.9□□□□□ -0.82
GGA3-223ENST00000621870 LMNB2Q03252 620 aa9.9□□□□□ -0.82
GGA3-223ENST00000621870 GRIN1Q05586 938 aa9.9□□□□□ -0.82
GGA3-223ENST00000621870 VEPH1Q14D04 833 aa9.9□□□□□ -0.82
GGA3-223ENST00000621870 ARHGEF18Q6ZSZ5 1173 aa9.9□□□□□ -0.82
GGA3-223ENST00000621870 TTC30AQ86WT1 665 aa9.9□□□□□ -0.82
GGA3-223ENST00000621870 SPON2Q9BUD6 331 aa9.9□□□□□ -0.82
GGA3-223ENST00000621870 KIFC3Q9BVG8 833 aa9.9□□□□□ -0.82
GGA3-223ENST00000621870 EFCC1Q9HA90 598 aa9.9□□□□□ -0.82
GGA3-223ENST00000621870 SMYD2Q9NRG4 433 aa9.9□□□□□ -0.82
GGA3-223ENST00000621870 GPRC5DQ9NZD1 345 aa9.9□□□□□ -0.82
GGA3-223ENST00000621870 CALCOCO1Q9P1Z2 691 aa9.9□□□□□ -0.82
GGA3-223ENST00000621870 VWDEQ8N2E2 1590 aa9.9□□□□□ -0.82
GGA3-223ENST00000621870 ITSN1Q15811 1721 aa9.9□□□□□ -0.82
GGA3-223ENST00000621870 MSH4O15457 936 aa9.9□□□□□ -0.82
GGA3-223ENST00000621870 ARP10275 920 aa9.9□□□□□ -0.82
GGA3-223ENST00000621870 RECQLP46063 649 aaPredicted RBP9.9□□□□□ -0.82
GGA3-223ENST00000621870 XRRA1Q6P2D8 792 aa9.9□□□□□ -0.82
GGA3-223ENST00000621870 ELMOD1Q8N336 334 aa9.9□□□□□ -0.82
GGA3-223ENST00000621870 MCUQ8NE86 351 aa9.9□□□□□ -0.82
GGA3-223ENST00000621870 PDCD6IPQ8WUM4 868 aaKnown RBP9.9□□□□□ -0.82
GGA3-223ENST00000621870 PPP1R13BQ96KQ4 1090 aa9.9□□□□□ -0.82
GGA3-223ENST00000621870 HEMGNQ9BXL5 484 aa9.9□□□□□ -0.82
GGA3-223ENST00000621870 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9.9□□□□□ -0.82
GGA3-223ENST00000621870 SLC8A2Q9UPR5 921 aa9.9□□□□□ -0.82
GGA3-223ENST00000621870 PCDHAC2Q9Y5I4 1007 aa9.9□□□□□ -0.82
GGA3-223ENST00000621870 HEY1Q9Y5J3 304 aa9.9□□□□□ -0.82
GGA3-223ENST00000621870 SCINQ9Y6U3 715 aa9.9□□□□□ -0.82
GGA3-223ENST00000621870 CAMTA1Q9Y6Y1 1673 aa9.9□□□□□ -0.82
GGA3-223ENST00000621870 TTC26A0AVF1 554 aa9.9□□□□□ -0.83
GGA3-223ENST00000621870 PDXKO00764 312 aa9.9□□□□□ -0.83
GGA3-223ENST00000621870 CXCL11O14625 94 aa9.9□□□□□ -0.83
GGA3-223ENST00000621870 PDGFRBP09619 1106 aa9.9□□□□□ -0.83
GGA3-223ENST00000621870 TBXAS1P24557 533 aaPredicted RBP9.9□□□□□ -0.83
GGA3-223ENST00000621870 TM4SF1P30408 202 aa9.9□□□□□ -0.83
GGA3-223ENST00000621870 THPOP40225 353 aa9.9□□□□□ -0.83
GGA3-223ENST00000621870 GMCL1Q96IK5 515 aa9.9□□□□□ -0.83
GGA3-223ENST00000621870 SCYL1Q96KG9 808 aa9.9□□□□□ -0.83
GGA3-223ENST00000621870 HSPBP1Q9NZL4 362 aa9.9□□□□□ -0.83
GGA3-223ENST00000621870 PPP2R3BQ9Y5P8 575 aa9.9□□□□□ -0.83
GGA3-223ENST00000621870 SLC37A4O43826 429 aa9.89□□□□□ -0.83
GGA3-223ENST00000621870 CPT1AP50416 773 aa9.89□□□□□ -0.83
GGA3-223ENST00000621870 SEPT6Q14141 434 aa9.89□□□□□ -0.83
GGA3-223ENST00000621870 RNF219Q5W0B1 726 aaPredicted RBP9.89□□□□□ -0.83
GGA3-223ENST00000621870 MOB2Q70IA6 237 aa9.89□□□□□ -0.83
GGA3-223ENST00000621870 SDCCAG8Q86SQ7 713 aaPredicted RBP9.89□□□□□ -0.83
GGA3-223ENST00000621870 RPUSD2Q8IZ73 545 aaKnown RBP9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms