RNA–Protein interactions for RNA: ENST00000621217.4

GGA3-222, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2

Gene GGA3, Length 4,181 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-222ENST00000621217 PAF1Q8N7H5 531 aa9.79□□□□□ -0.84
GGA3-222ENST00000621217 SCFD1Q8WVM8 642 aa9.79□□□□□ -0.84
GGA3-222ENST00000621217 BCAS3Q9H6U6 928 aa9.79□□□□□ -0.84
GGA3-222ENST00000621217 ACAD9Q9H845 621 aa9.79□□□□□ -0.84
GGA3-222ENST00000621217 REXO2Q9Y3B8 237 aaKnown RBP9.79□□□□□ -0.84
GGA3-222ENST00000621217 CLTAP09496 248 aa9.78□□□□□ -0.84
GGA3-222ENST00000621217 FGRP09769 529 aa9.78□□□□□ -0.84
GGA3-222ENST00000621217 STXBP2Q15833 593 aa9.78□□□□□ -0.84
GGA3-222ENST00000621217 CEP128Q6ZU80 1094 aa9.78□□□□□ -0.84
GGA3-222ENST00000621217 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.78□□□□□ -0.847e-10■■□□□ 14.3
GGA3-222ENST00000621217 HAS1Q92839 578 aa9.78□□□□□ -0.84
GGA3-222ENST00000621217 MTMR8Q96EF0 704 aa9.78□□□□□ -0.84
GGA3-222ENST00000621217 ERGIC2Q96RQ1 377 aa9.78□□□□□ -0.84
GGA3-222ENST00000621217 SMC6Q96SB8 1091 aa9.78□□□□□ -0.84
GGA3-222ENST00000621217 EHD4Q9H223 541 aa9.78□□□□□ -0.84
GGA3-222ENST00000621217 TSKSQ9UJT2 592 aa9.78□□□□□ -0.84
GGA3-222ENST00000621217 ABT1Q9ULW3 272 aaKnown RBP9.78□□□□□ -0.84
GGA3-222ENST00000621217 DENND3A2RUS2 1198 aa9.78□□□□□ -0.84
GGA3-222ENST00000621217 WDR64B1ANS9 1081 aa9.78□□□□□ -0.84
GGA3-222ENST00000621217 PDE2AO00408 941 aaPredicted RBP9.78□□□□□ -0.84
GGA3-222ENST00000621217 DKC1O60832 514 aaKnown RBP eCLIP9.78□□□□□ -0.84
GGA3-222ENST00000621217 KRT14P02533 472 aa9.78□□□□□ -0.84
GGA3-222ENST00000621217 CARSP49589 748 aaKnown RBP9.78□□□□□ -0.84
GGA3-222ENST00000621217 JAG1P78504 1218 aa9.78□□□□□ -0.84
GGA3-222ENST00000621217 MAP7Q14244 749 aa9.78□□□□□ -0.84
GGA3-222ENST00000621217 VSIG1Q86XK7 387 aa9.78□□□□□ -0.84
GGA3-222ENST00000621217 OR2W6PQ8NHA6 318 aa9.78□□□□□ -0.84
GGA3-222ENST00000621217 IQCDQ96DY2 449 aa9.78□□□□□ -0.84
GGA3-222ENST00000621217 AMACRQ9UHK6 382 aa9.78□□□□□ -0.84
GGA3-222ENST00000621217 NOD1Q9Y239 953 aa9.78□□□□□ -0.84
GGA3-222ENST00000621217 EML1O00423 815 aa9.78□□□□□ -0.84
GGA3-222ENST00000621217 CTNND1O60716 968 aaKnown RBP9.78□□□□□ -0.84
GGA3-222ENST00000621217 STAMBPO95630 424 aa9.78□□□□□ -0.84
GGA3-222ENST00000621217 CD58P19256 250 aa9.78□□□□□ -0.84
GGA3-222ENST00000621217 TFAMQ00059 246 aaKnown RBP9.78□□□□□ -0.84
GGA3-222ENST00000621217 GABPAQ06546 454 aa9.78□□□□□ -0.84
GGA3-222ENST00000621217 CALCOCO2Q13137 446 aa9.78□□□□□ -0.84
GGA3-222ENST00000621217 NNTQ13423 1086 aa9.78□□□□□ -0.84
GGA3-222ENST00000621217 MUM1L1Q5H9M0 696 aa9.78□□□□□ -0.84
GGA3-222ENST00000621217 HOOK3Q86VS8 718 aa9.78□□□□□ -0.84
GGA3-222ENST00000621217 LRRC15Q8TF66 581 aa9.78□□□□□ -0.84
GGA3-222ENST00000621217 NXF1Q9UBU9 619 aaKnown RBP9.78□□□□□ -0.84
GGA3-222ENST00000621217 FAM169AQ9Y6X4 670 aa9.78□□□□□ -0.84
GGA3-222ENST00000621217 ESYT2A0FGR8 921 aa9.78□□□□□ -0.84
GGA3-222ENST00000621217 K7ERI5 159 aa9.78□□□□□ -0.84
GGA3-222ENST00000621217 P4HBP07237 508 aaKnown RBP9.78□□□□□ -0.84
GGA3-222ENST00000621217 IFNAR2P48551 515 aa9.78□□□□□ -0.84
GGA3-222ENST00000621217 EPHB4P54760 987 aa9.78□□□□□ -0.84
GGA3-222ENST00000621217 IRX1P78414 480 aaPredicted RBP9.78□□□□□ -0.84
GGA3-222ENST00000621217 SEZ6Q53EL9 994 aa9.78□□□□□ -0.84
GGA3-222ENST00000621217 KAZNQ674X7 775 aa9.78□□□□□ -0.84
GGA3-222ENST00000621217 SCARA5Q6ZMJ2 495 aa9.78□□□□□ -0.84
GGA3-222ENST00000621217 MAGOHBQ96A72 148 aaKnown RBP9.78□□□□□ -0.84
GGA3-222ENST00000621217 MTRF1LQ9UGC7 380 aaKnown RBP9.78□□□□□ -0.84
GGA3-222ENST00000621217 MYO5AQ9Y4I1 1855 aaKnown RBP9.77□□□□□ -0.84
GGA3-222ENST00000621217 LRRC10BA6NIK2 292 aa9.77□□□□□ -0.85
GGA3-222ENST00000621217 PGRMC1O00264 195 aaKnown RBP9.77□□□□□ -0.85
GGA3-222ENST00000621217 ATMINO43313 823 aaPredicted RBP9.77□□□□□ -0.85
GGA3-222ENST00000621217 FERP16591 822 aa9.77□□□□□ -0.85
GGA3-222ENST00000621217 NT5C2P49902 561 aa9.77□□□□□ -0.85
GGA3-222ENST00000621217 BACE1P56817 501 aa9.77□□□□□ -0.85
GGA3-222ENST00000621217 EPC2Q52LR7 807 aa9.77□□□□□ -0.85
GGA3-222ENST00000621217 TRIM68Q6AZZ1 485 aa9.77□□□□□ -0.85
GGA3-222ENST00000621217 APTXQ7Z2E3 356 aaKnown RBP9.77□□□□□ -0.85
GGA3-222ENST00000621217 TRAPPC11Q7Z392 1133 aa9.77□□□□□ -0.85
GGA3-222ENST00000621217 CROCCP2Q86T23 111 aa9.77□□□□□ -0.85
GGA3-222ENST00000621217 UBL4BQ8N7F7 174 aa9.77□□□□□ -0.85
GGA3-222ENST00000621217 CCDC63Q8NA47 563 aa9.77□□□□□ -0.85
GGA3-222ENST00000621217 FBXO41Q8TF61 875 aa9.77□□□□□ -0.85
GGA3-222ENST00000621217 FAM213AQ9BRX8 229 aa9.77□□□□□ -0.85
GGA3-222ENST00000621217 ACTR5Q9H9F9 607 aaPredicted RBP9.77□□□□□ -0.85
GGA3-222ENST00000621217 TYW1Q9NV66 732 aaKnown RBP9.77□□□□□ -0.85
GGA3-222ENST00000621217 AKAP3O75969 853 aa9.77□□□□□ -0.85
GGA3-222ENST00000621217 YWHABP31946 246 aaKnown RBP9.77□□□□□ -0.85
GGA3-222ENST00000621217 MXI1P50539 228 aa9.77□□□□□ -0.85
GGA3-222ENST00000621217 DHX9Q08211 1270 aaKnown RBP9.77□□□□□ -0.85
GGA3-222ENST00000621217 RRP1BQ14684 758 aaKnown RBP9.77□□□□□ -0.85
GGA3-222ENST00000621217 PASD1Q8IV76 773 aa9.77□□□□□ -0.85
GGA3-222ENST00000621217 SCYL3Q8IZE3 742 aa9.77□□□□□ -0.85
GGA3-222ENST00000621217 LPAR1Q92633 364 aa9.77□□□□□ -0.85
GGA3-222ENST00000621217 ZNF653Q96CK0 615 aa9.77□□□□□ -0.85
GGA3-222ENST00000621217 SH3GL3Q99963 347 aa9.77□□□□□ -0.85
GGA3-222ENST00000621217 UNC45AQ9H3U1 944 aa9.77□□□□□ -0.85
GGA3-222ENST00000621217 MTUS1Q9ULD2 1270 aa9.77□□□□□ -0.85
GGA3-222ENST00000621217 TPX2Q9ULW0 747 aaKnown RBP9.77□□□□□ -0.85
GGA3-222ENST00000621217 SNX24Q9Y343 169 aa9.77□□□□□ -0.85
GGA3-222ENST00000621217 EMSYQ7Z589 1322 aa9.77□□□□□ -0.85
GGA3-222ENST00000621217 ANO9A1A5B4 782 aa9.77□□□□□ -0.85
GGA3-222ENST00000621217 PFDN1O60925 122 aa9.77□□□□□ -0.85
GGA3-222ENST00000621217 CSDE1O75534 798 aaKnown RBP9.77□□□□□ -0.85
GGA3-222ENST00000621217 PSAPP07602 524 aa9.77□□□□□ -0.85
GGA3-222ENST00000621217 SLC18A3Q16572 532 aa9.77□□□□□ -0.85
GGA3-222ENST00000621217 C2CD6Q53TS8 623 aa9.77□□□□□ -0.85
GGA3-222ENST00000621217 MIIPQ5JXC2 388 aa9.77□□□□□ -0.85
GGA3-222ENST00000621217 RASIP1Q5U651 963 aa9.77□□□□□ -0.85
GGA3-222ENST00000621217 SYCE1Q8N0S2 351 aa9.77□□□□□ -0.85
GGA3-222ENST00000621217 MTMR9Q96QG7 549 aa9.77□□□□□ -0.85
GGA3-222ENST00000621217 CELF4Q9BZC1 486 aaKnown RBP9.77□□□□□ -0.85
GGA3-222ENST00000621217 NRBP2Q9NSY0 501 aa9.77□□□□□ -0.85
GGA3-222ENST00000621217 TISP43B9A030 160 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms