RNA–Protein interactions for RNA: ENST00000620787.4

PDLIM3-212, Transcript of PDZ and LIM domain 3, humanhuman

TSL 4 BASIC

Gene PDLIM3, Length 2,352 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-212ENST00000620787 FAM20AQ96MK3 541 aa21.14■□□□□ 0.97
PDLIM3-212ENST00000620787 MKNK1Q9BUB5 465 aa21.14■□□□□ 0.97
PDLIM3-212ENST00000620787 POLR3CQ9BUI4 534 aaPredicted RBP21.14■□□□□ 0.97
PDLIM3-212ENST00000620787 SAMD15Q9P1V8 674 aa21.14■□□□□ 0.97
PDLIM3-212ENST00000620787 PCYOX1Q9UHG3 505 aa21.14■□□□□ 0.97
PDLIM3-212ENST00000620787 STK24Q9Y6E0 443 aa21.14■□□□□ 0.97
PDLIM3-212ENST00000620787 UBAP1LF5GYI3 381 aa21.14■□□□□ 0.97
PDLIM3-212ENST00000620787 MSH4O15457 936 aa21.14■□□□□ 0.97
PDLIM3-212ENST00000620787 CTNNA2P26232 953 aa21.14■□□□□ 0.97
PDLIM3-212ENST00000620787 MARCKSL1P49006 195 aa21.14■□□□□ 0.97
PDLIM3-212ENST00000620787 KIF22Q14807 665 aa21.14■□□□□ 0.97
PDLIM3-212ENST00000620787 ZC2HC1CQ53FD0 456 aaPredicted RBP21.14■□□□□ 0.97
PDLIM3-212ENST00000620787 ZDHHC14Q8IZN3 488 aa21.14■□□□□ 0.97
PDLIM3-212ENST00000620787 CCDC63Q8NA47 563 aa21.14■□□□□ 0.97
PDLIM3-212ENST00000620787 KRT35Q92764 455 aa21.14■□□□□ 0.97
PDLIM3-212ENST00000620787 SEPT11Q9NVA2 429 aaKnown RBP21.14■□□□□ 0.97
PDLIM3-212ENST00000620787 APEX2Q9UBZ4 518 aa21.14■□□□□ 0.97
PDLIM3-212ENST00000620787 POLLQ9UGP5 575 aa21.14■□□□□ 0.97
PDLIM3-212ENST00000620787 TAF1LQ8IZX4 1826 aa21.13■□□□□ 0.97
PDLIM3-212ENST00000620787 AFF2P51816 1311 aa21.13■□□□□ 0.97
PDLIM3-212ENST00000620787 EML1O00423 815 aa21.13■□□□□ 0.97
PDLIM3-212ENST00000620787 SLURP2P0DP57 97 aa21.13■□□□□ 0.97
PDLIM3-212ENST00000620787 ALAS1P13196 640 aa21.13■□□□□ 0.97
PDLIM3-212ENST00000620787 C11orf63Q6NUN7 778 aa21.13■□□□□ 0.97
PDLIM3-212ENST00000620787 BTNL9Q6UXG8 535 aa21.13■□□□□ 0.97
PDLIM3-212ENST00000620787 TRPM8Q7Z2W7 1104 aa21.13■□□□□ 0.97
PDLIM3-212ENST00000620787 UHMK1Q8TAS1 419 aaKnown RBP21.13■□□□□ 0.97
PDLIM3-212ENST00000620787 RPGRQ92834 1020 aaKnown RBP21.13■□□□□ 0.97
PDLIM3-212ENST00000620787 EIF2AK1Q9BQI3 630 aaKnown RBP21.13■□□□□ 0.97
PDLIM3-212ENST00000620787 RGL1Q9NZL6 768 aa21.13■□□□□ 0.97
PDLIM3-212ENST00000620787 TRIM49P0CI25 452 aa21.12■□□□□ 0.97
PDLIM3-212ENST00000620787 TRIM49CP0CI26 452 aa21.12■□□□□ 0.97
PDLIM3-212ENST00000620787 HSPA6P17066 643 aa21.12■□□□□ 0.97
PDLIM3-212ENST00000620787 FGFR4P22455 802 aa21.12■□□□□ 0.97
PDLIM3-212ENST00000620787 MMP14P50281 582 aa21.12■□□□□ 0.97
PDLIM3-212ENST00000620787 CTTNQ14247 550 aaKnown RBP21.12■□□□□ 0.97
PDLIM3-212ENST00000620787 SLC15A2Q16348 729 aa21.12■□□□□ 0.97
PDLIM3-212ENST00000620787 CROCCP2Q86T23 111 aa21.12■□□□□ 0.97
PDLIM3-212ENST00000620787 RHOT2Q8IXI1 618 aa21.12■□□□□ 0.97
PDLIM3-212ENST00000620787 BAIAP2L1Q9UHR4 511 aa21.12■□□□□ 0.97
PDLIM3-212ENST00000620787 CEP83Q9Y592 693 aa21.12■□□□□ 0.97
PDLIM3-212ENST00000620787 MIF4GDA9UHW6 222 aaKnown RBP21.12■□□□□ 0.97
PDLIM3-212ENST00000620787 RIPK2O43353 540 aa21.12■□□□□ 0.97
PDLIM3-212ENST00000620787 FAM13AO94988 1023 aa21.12■□□□□ 0.97
PDLIM3-212ENST00000620787 GBP1P32455 592 aa21.12■□□□□ 0.97
PDLIM3-212ENST00000620787 SREBF1P36956 1147 aa21.12■□□□□ 0.97
PDLIM3-212ENST00000620787 ARHGAP44Q17R89 818 aa21.12■□□□□ 0.97
PDLIM3-212ENST00000620787 KSR1Q8IVT5 923 aa21.12■□□□□ 0.97
PDLIM3-212ENST00000620787 MTRF1LQ9UGC7 380 aaKnown RBP21.12■□□□□ 0.97
PDLIM3-212ENST00000620787 PODXLO00592 558 aa21.11■□□□□ 0.97
PDLIM3-212ENST00000620787 RAD21O60216 631 aa21.11■□□□□ 0.97
PDLIM3-212ENST00000620787 VIMP08670 466 aaKnown RBP21.11■□□□□ 0.97
PDLIM3-212ENST00000620787 SLCO1A2P46721 670 aa21.11■□□□□ 0.97
PDLIM3-212ENST00000620787 GTF2IP78347 998 aa21.11■□□□□ 0.97
PDLIM3-212ENST00000620787 AUHQ13825 339 aaKnown RBP21.11■□□□□ 0.97
PDLIM3-212ENST00000620787 CNGA2Q16280 664 aa21.11■□□□□ 0.97
PDLIM3-212ENST00000620787 MYCT1Q8N699 235 aa21.11■□□□□ 0.97
PDLIM3-212ENST00000620787 TBC1D16Q8TBP0 767 aa21.11■□□□□ 0.97
PDLIM3-212ENST00000620787 AGPAT1Q99943 283 aa21.11■□□□□ 0.97
PDLIM3-212ENST00000620787 ZSWIM1Q9BR11 485 aa21.11■□□□□ 0.97
PDLIM3-212ENST00000620787 ABCF3Q9NUQ8 709 aa21.11■□□□□ 0.97
PDLIM3-212ENST00000620787 PARP2Q9UGN5 583 aa21.11■□□□□ 0.97
PDLIM3-212ENST00000620787 MYH11P35749 1972 aa21.11■□□□□ 0.97
PDLIM3-212ENST00000620787 RBBP6Q7Z6E9 1792 aaKnown RBP21.11■□□□□ 0.97
PDLIM3-212ENST00000620787 IFNAR2P48551 515 aa21.11■□□□□ 0.97
PDLIM3-212ENST00000620787 MYL7Q01449 175 aa21.11■□□□□ 0.97
PDLIM3-212ENST00000620787 RIPK1Q13546 671 aa21.11■□□□□ 0.97
PDLIM3-212ENST00000620787 FAM133BQ5BKY9 247 aaKnown RBP21.11■□□□□ 0.97
PDLIM3-212ENST00000620787 FMNL3Q8IVF7 1028 aa21.11■□□□□ 0.97
PDLIM3-212ENST00000620787 UBL4BQ8N7F7 174 aa21.11■□□□□ 0.97
PDLIM3-212ENST00000620787 PIGOQ8TEQ8 1089 aa21.11■□□□□ 0.97
PDLIM3-212ENST00000620787 SLC20A1Q8WUM9 679 aa21.11■□□□□ 0.97
PDLIM3-212ENST00000620787 MIEF2Q96C03 454 aa21.11■□□□□ 0.97
PDLIM3-212ENST00000620787 DMAC2Q9NW81 257 aa21.11■□□□□ 0.97
PDLIM3-212ENST00000620787 AGAP1Q9UPQ3 857 aa21.11■□□□□ 0.97
PDLIM3-212ENST00000620787 LTBP1Q14766 1721 aa21.11■□□□□ 0.97
PDLIM3-212ENST00000620787 SIPA1L1O43166 1804 aa21.1■□□□□ 0.97
PDLIM3-212ENST00000620787 ANKRD63C9JTQ0 380 aa21.1■□□□□ 0.97
PDLIM3-212ENST00000620787 FOXN3O00409 490 aaPredicted RBP21.1■□□□□ 0.97
PDLIM3-212ENST00000620787 OAS1P00973 400 aaKnown RBP21.1■□□□□ 0.97
PDLIM3-212ENST00000620787 SCP2P22307 547 aa21.1■□□□□ 0.97
PDLIM3-212ENST00000620787 PHLDB3Q6NSJ2 640 aa21.1■□□□□ 0.97
PDLIM3-212ENST00000620787 C1orf186Q6ZWK4 172 aa21.1■□□□□ 0.97
PDLIM3-212ENST00000620787 CYP2W1Q8TAV3 490 aa21.1■□□□□ 0.97
PDLIM3-212ENST00000620787 DCAF4Q8WV16 495 aa21.1■□□□□ 0.97
PDLIM3-212ENST00000620787 TCP11Q8WWU5 503 aa21.1■□□□□ 0.97
PDLIM3-212ENST00000620787 FIZ1Q96SL8 496 aa21.1■□□□□ 0.97
PDLIM3-212ENST00000620787 NSRP1Q9H0G5 558 aaKnown RBP21.1■□□□□ 0.97
PDLIM3-212ENST00000620787 CFAP73A6NFT4 308 aa21.1■□□□□ 0.97
PDLIM3-212ENST00000620787 RASGRF2O14827 1237 aa21.1■□□□□ 0.97
PDLIM3-212ENST00000620787 LRRN2O75325 713 aa21.1■□□□□ 0.97
PDLIM3-212ENST00000620787 CIITAP33076 1130 aa21.1■□□□□ 0.97
PDLIM3-212ENST00000620787 CYP2J2P51589 502 aa21.1■□□□□ 0.97
PDLIM3-212ENST00000620787 SNAP25P60880 206 aa21.1■□□□□ 0.97
PDLIM3-212ENST00000620787 TCEAL1Q15170 157 aa21.1■□□□□ 0.97
PDLIM3-212ENST00000620787 ACCSLQ4AC99 568 aa21.1■□□□□ 0.97
PDLIM3-212ENST00000620787 PRR5LQ6MZQ0 368 aa21.1■□□□□ 0.97
PDLIM3-212ENST00000620787 CCDC137Q6PK04 289 aaKnown RBP21.1■□□□□ 0.97
PDLIM3-212ENST00000620787 TBC1D31Q96DN5 1066 aa21.1■□□□□ 0.97
PDLIM3-212ENST00000620787 STMN4Q9H169 189 aaPredicted RBP21.1■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms