RNA–Protein interactions for RNA: ENST00000620709.4

CD40-207, Transcript of CD40 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD40, Length 1,522 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-207ENST00000620709 KSR1Q8IVT5 923 aa17.95■□□□□ 0.46
CD40-207ENST00000620709 NLRP4Q96MN2 994 aa17.95■□□□□ 0.46
CD40-207ENST00000620709 CASD1Q96PB1 797 aa17.95■□□□□ 0.46
CD40-207ENST00000620709 LRFN3Q9BTN0 628 aa17.95■□□□□ 0.46
CD40-207ENST00000620709 CWH43Q9H720 699 aa17.95■□□□□ 0.46
CD40-207ENST00000620709 TLR9Q9NR96 1032 aa17.95■□□□□ 0.46
CD40-207ENST00000620709 BMP2KQ9NSY1 1161 aaPredicted RBP17.95■□□□□ 0.46
CD40-207ENST00000620709 GOLGA6L4A6NEF3 574 aa17.94■□□□□ 0.46
CD40-207ENST00000620709 FAM205CA6NFA0 338 aa17.94■□□□□ 0.46
CD40-207ENST00000620709 MBTPS2O43462 519 aa17.94■□□□□ 0.46
CD40-207ENST00000620709 MAFO75444 373 aaPredicted RBP17.94■□□□□ 0.46
CD40-207ENST00000620709 PBX3P40426 434 aa17.94■□□□□ 0.46
CD40-207ENST00000620709 NPEPPSP55786 919 aa17.94■□□□□ 0.46
CD40-207ENST00000620709 STK38Q15208 465 aa17.94■□□□□ 0.46
CD40-207ENST00000620709 EARS2Q5JPH6 523 aaKnown RBP17.94■□□□□ 0.46
CD40-207ENST00000620709 PPP4R3AQ6IN85 833 aa17.94■□□□□ 0.46
CD40-207ENST00000620709 ANO5Q75V66 913 aa17.94■□□□□ 0.46
CD40-207ENST00000620709 POTEDQ86YR6 584 aa17.94■□□□□ 0.46
CD40-207ENST00000620709 HELQQ8TDG4 1101 aa17.94■□□□□ 0.46
CD40-207ENST00000620709 KCNG4Q8TDN1 519 aa17.94■□□□□ 0.46
CD40-207ENST00000620709 TNFRSF25Q93038 417 aa17.94■□□□□ 0.46
CD40-207ENST00000620709 NAP1L4Q99733 375 aaKnown RBP17.94■□□□□ 0.46
CD40-207ENST00000620709 KCNMB3Q9NPA1 279 aa17.94■□□□□ 0.46
CD40-207ENST00000620709 VAV3Q9UKW4 847 aa17.94■□□□□ 0.46
CD40-207ENST00000620709 CLIC4Q9Y696 253 aa17.94■□□□□ 0.46
CD40-207ENST00000620709 PI4K2BG5E9Z4 385 aa17.93■□□□□ 0.46
CD40-207ENST00000620709 DKC1O60832 514 aaKnown RBP eCLIP17.93■□□□□ 0.46
CD40-207ENST00000620709 SFPQP23246 707 aaKnown RBP eCLIP17.93■□□□□ 0.46
CD40-207ENST00000620709 ERVFC1P60507 584 aa17.93■□□□□ 0.46
CD40-207ENST00000620709 CDC42EP1Q00587 391 aa17.93■□□□□ 0.46
CD40-207ENST00000620709 UBE3AQ05086 875 aa17.93■□□□□ 0.46
CD40-207ENST00000620709 ZP2Q05996 745 aa17.93■□□□□ 0.46
CD40-207ENST00000620709 PPP2R5CQ13362 524 aa17.93■□□□□ 0.46
CD40-207ENST00000620709 PLPP4Q5VZY2 271 aa17.93■□□□□ 0.46
CD40-207ENST00000620709 LRRC55Q6ZSA7 311 aa17.93■□□□□ 0.46
CD40-207ENST00000620709 LRRC43Q8N309 656 aa17.93■□□□□ 0.46
CD40-207ENST00000620709 EFHBQ8N7U6 833 aa17.93■□□□□ 0.46
CD40-207ENST00000620709 LINC00301Q8NCQ3 95 aa17.93■□□□□ 0.46
CD40-207ENST00000620709 CEP170P1Q96L14 293 aa17.93■□□□□ 0.46
CD40-207ENST00000620709 ZNF558Q96NG5 402 aa17.93■□□□□ 0.46
CD40-207ENST00000620709 ENTPD7Q9NQZ7 604 aa17.93■□□□□ 0.46
CD40-207ENST00000620709 CYP26B1Q9NR63 512 aa17.93■□□□□ 0.46
CD40-207ENST00000620709 RNF19AQ9NV58 838 aa17.93■□□□□ 0.46
CD40-207ENST00000620709 DACT1Q9NYF0 836 aa17.93■□□□□ 0.46
CD40-207ENST00000620709 PUF60Q9UHX1 559 aaKnown RBP17.93■□□□□ 0.46
CD40-207ENST00000620709 BARX2Q9UMQ3 279 aaPredicted RBP17.93■□□□□ 0.46
CD40-207ENST00000620709 NOL7Q9UMY1 257 aaKnown RBP17.93■□□□□ 0.46
CD40-207ENST00000620709 PIN4Q9Y237 131 aaKnown RBP17.93■□□□□ 0.46
CD40-207ENST00000620709 P4HBP07237 508 aaKnown RBP17.93■□□□□ 0.46
CD40-207ENST00000620709 CA8P35219 290 aa17.93■□□□□ 0.46
CD40-207ENST00000620709 POLGP54098 1239 aaPredicted RBP17.93■□□□□ 0.46
CD40-207ENST00000620709 SMAD4Q13485 552 aaKnown RBP17.93■□□□□ 0.46
CD40-207ENST00000620709 CLLU1OSQ5K130 101 aa17.93■□□□□ 0.46
CD40-207ENST00000620709 TWF2Q6IBS0 349 aaKnown RBP17.93■□□□□ 0.46
CD40-207ENST00000620709 KCNT2Q6UVM3 1135 aa17.93■□□□□ 0.46
CD40-207ENST00000620709 CATSPER4Q7RTX7 472 aa17.93■□□□□ 0.46
CD40-207ENST00000620709 ADHFE1Q8IWW8 467 aa17.93■□□□□ 0.46
CD40-207ENST00000620709 ZNF579Q8NAF0 562 aaKnown RBP17.93■□□□□ 0.46
CD40-207ENST00000620709 CEP89Q96ST8 783 aa17.93■□□□□ 0.46
CD40-207ENST00000620709 JPH2Q9BR39 696 aaPredicted RBP17.93■□□□□ 0.46
CD40-207ENST00000620709 PRKAG3Q9UGI9 489 aa17.93■□□□□ 0.46
CD40-207ENST00000620709 IGKV6-21A0A0C4DH24 114 aa17.92■□□□□ 0.46
CD40-207ENST00000620709 A0A0U1RQF3 1178 aa17.92■□□□□ 0.46
CD40-207ENST00000620709 SPTLC2O15270 562 aa17.92■□□□□ 0.46
CD40-207ENST00000620709 CYP4A11Q02928 519 aa17.92■□□□□ 0.46
CD40-207ENST00000620709 CTTNQ14247 550 aaKnown RBP17.92■□□□□ 0.46
CD40-207ENST00000620709 SF3A1Q15459 793 aaKnown RBP17.92■□□□□ 0.46
CD40-207ENST00000620709 SLC7A3Q8WY07 619 aa17.92■□□□□ 0.46
CD40-207ENST00000620709 MRPS27Q92552 414 aaKnown RBP17.92■□□□□ 0.46
CD40-207ENST00000620709 HAS1Q92839 578 aa17.92■□□□□ 0.46
CD40-207ENST00000620709 TMEM143Q96AN5 459 aa17.92■□□□□ 0.46
CD40-207ENST00000620709 DYDC2Q96IM9 177 aa17.92■□□□□ 0.46
CD40-207ENST00000620709 TCF25Q9BQ70 676 aa17.92■□□□□ 0.46
CD40-207ENST00000620709 INO80BQ9C086 356 aaPredicted RBP17.92■□□□□ 0.46
CD40-207ENST00000620709 RGL1Q9NZL6 768 aa17.92■□□□□ 0.46
CD40-207ENST00000620709 WRAP73Q9P2S5 460 aaPredicted RBP17.92■□□□□ 0.46
CD40-207ENST00000620709 TBX3O15119 743 aa17.91■□□□□ 0.46
CD40-207ENST00000620709 EOMESO95936 686 aa17.91■□□□□ 0.46
CD40-207ENST00000620709 SRGAP2CP0DJJ0 459 aa17.91■□□□□ 0.46
CD40-207ENST00000620709 ALADP13716 330 aa17.91■□□□□ 0.46
CD40-207ENST00000620709 ME1P48163 572 aa17.91■□□□□ 0.46
CD40-207ENST00000620709 RBM10P98175 930 aaKnown RBP17.91■□□□□ 0.46
CD40-207ENST00000620709 KRT17Q04695 432 aa17.91■□□□□ 0.46
CD40-207ENST00000620709 EPHA7Q15375 998 aa17.91■□□□□ 0.46
CD40-207ENST00000620709 SMAD2Q15796 467 aaKnown RBP17.91■□□□□ 0.46
CD40-207ENST00000620709 CAVIN1Q6NZI2 390 aaKnown RBP17.91■□□□□ 0.46
CD40-207ENST00000620709 ZNF410Q86VK4 478 aa17.91■□□□□ 0.46
CD40-207ENST00000620709 SLFN12Q8IYM2 578 aa17.91■□□□□ 0.46
CD40-207ENST00000620709 LPPQ93052 612 aa17.91■□□□□ 0.46
CD40-207ENST00000620709 SYAP1Q96A49 352 aaPredicted RBP17.91■□□□□ 0.46
CD40-207ENST00000620709 LXNQ9BS40 222 aa17.91■□□□□ 0.46
CD40-207ENST00000620709 CLEC1BQ9P126 229 aa17.91■□□□□ 0.46
CD40-207ENST00000620709 YWHABP31946 246 aaKnown RBP17.9■□□□□ 0.46
CD40-207ENST00000620709 PHKA2P46019 1235 aa17.9■□□□□ 0.46
CD40-207ENST00000620709 TRAPPC10P48553 1259 aa17.9■□□□□ 0.46
CD40-207ENST00000620709 TOB1P50616 345 aaPredicted RBP17.9■□□□□ 0.46
CD40-207ENST00000620709 SLC39A14Q15043 492 aa17.9■□□□□ 0.46
CD40-207ENST00000620709 XKR9Q5GH70 373 aa17.9■□□□□ 0.46
CD40-207ENST00000620709 LLGL2Q6P1M3 1020 aa17.9■□□□□ 0.46
CD40-207ENST00000620709 OTUD6AQ7L8S5 288 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms