RNA–Protein interactions for RNA: ENST00000619396.4

KHSRP-213, Transcript of KH-type splicing regulatory protein, human

APPRIS ALT2 TSL 5 BASIC

Gene KHSRP, Length 2,226 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KHSRP-213	ENST00000619396	FLT3	P36888	993 aa		32.57	■■■□□ 2.8
KHSRP-213	ENST00000619396	BANK1	Q8NDB2	785 aa		32.57	■■■□□ 2.8
KHSRP-213	ENST00000619396	INTS2	Q9H0H0	1204 aa	Known RBP	32.57	■■■□□ 2.8
KHSRP-213	ENST00000619396	HOMER2	Q9NSB8	354 aa		32.57	■■■□□ 2.8
KHSRP-213	ENST00000619396	IGSF9B	Q9UPX0	1349 aa		32.57	■■■□□ 2.8
KHSRP-213	ENST00000619396	DAPK3	O43293	454 aa		32.57	■■■□□ 2.8
KHSRP-213	ENST00000619396	PPP1R37	O75864	691 aa		32.57	■■■□□ 2.8
KHSRP-213	ENST00000619396	ICAM1	P05362	532 aa		32.57	■■■□□ 2.8
KHSRP-213	ENST00000619396	PPP2R5A	Q15172	486 aa		32.57	■■■□□ 2.8
KHSRP-213	ENST00000619396	PTGIS	Q16647	500 aa		32.57	■■■□□ 2.8
KHSRP-213	ENST00000619396	PPP1R9A	Q9ULJ8	1098 aa		32.57	■■■□□ 2.8
KHSRP-213	ENST00000619396	HS2ST1	Q7LGA3	356 aa		32.56	■■■□□ 2.8
KHSRP-213	ENST00000619396	FAM178B	Q8IXR5	827 aa		32.56	■■■□□ 2.8
KHSRP-213	ENST00000619396	CCDC26	Q8TAB7	109 aa		32.56	■■■□□ 2.8
KHSRP-213	ENST00000619396	CLEC4D	Q8WXI8	215 aa		32.56	■■■□□ 2.8
KHSRP-213	ENST00000619396	NACC1	Q96RE7	527 aa		32.56	■■■□□ 2.8
KHSRP-213	ENST00000619396	TAOK3	Q9H2K8	898 aa		32.56	■■■□□ 2.8
KHSRP-213	ENST00000619396	IPO5	O00410	1097 aa	Known RBP	32.55	■■■□□ 2.8
KHSRP-213	ENST00000619396	ZNF844	Q08AG5	666 aa		32.55	■■■□□ 2.8
KHSRP-213	ENST00000619396	B4GALNT4	Q76KP1	1039 aa		32.55	■■■□□ 2.8
KHSRP-213	ENST00000619396	OR2W6P	Q8NHA6	318 aa		32.55	■■■□□ 2.8
KHSRP-213	ENST00000619396	JDP2	Q8WYK2	163 aa		32.55	■■■□□ 2.8
KHSRP-213	ENST00000619396	STRA6	Q9BX79	667 aa		32.55	■■■□□ 2.8
KHSRP-213	ENST00000619396	EHMT1	Q9H9B1	1298 aa		32.55	■■■□□ 2.8
KHSRP-213	ENST00000619396	PPP1R1B	Q9UD71	204 aa	Predicted RBP	32.55	■■■□□ 2.8
KHSRP-213	ENST00000619396	ODF2L	Q9ULJ1	636 aa		32.55	■■■□□ 2.8
KHSRP-213	ENST00000619396	TTI1	O43156	1089 aa		32.55	■■■□□ 2.8
KHSRP-213	ENST00000619396	TRIM49	P0CI25	452 aa		32.55	■■■□□ 2.8
KHSRP-213	ENST00000619396	TRIM49C	P0CI26	452 aa		32.55	■■■□□ 2.8
KHSRP-213	ENST00000619396	CYP2J2	P51589	502 aa		32.55	■■■□□ 2.8
KHSRP-213	ENST00000619396	HSD17B4	P51659	736 aa		32.55	■■■□□ 2.8
KHSRP-213	ENST00000619396	MXRA8	Q9BRK3	442 aa		32.55	■■■□□ 2.8
KHSRP-213	ENST00000619396	WDR11	Q9BZH6	1224 aa		32.55	■■■□□ 2.8
KHSRP-213	ENST00000619396	RAVER2	Q9HCJ3	691 aa	Known RBP	32.55	■■■□□ 2.8
KHSRP-213	ENST00000619396	APEX2	Q9UBZ4	518 aa		32.55	■■■□□ 2.8
KHSRP-213	ENST00000619396	FRMD4B	Q9Y2L6	1034 aa		32.55	■■■□□ 2.8
KHSRP-213	ENST00000619396	MYZAP	P0CAP1	466 aa		32.54	■■■□□ 2.8
KHSRP-213	ENST00000619396	DCAF12L1	Q5VU92	463 aa		32.54	■■■□□ 2.8
KHSRP-213	ENST00000619396	SAMD7	Q7Z3H4	446 aa		32.54	■■■□□ 2.8
KHSRP-213	ENST00000619396	PAGR1	Q9BTK6	254 aa		32.54	■■■□□ 2.8
KHSRP-213	ENST00000619396	KCND2	Q9NZV8	630 aa		32.54	■■■□□ 2.8
KHSRP-213	ENST00000619396	ATXN2	Q99700	1313 aa	Known RBP	32.54	■■■□□ 2.8
KHSRP-213	ENST00000619396	GOLGA6L10	A6NI86	522 aa		32.54	■■■□□ 2.8
KHSRP-213	ENST00000619396	NFKBIE	O00221	500 aa		32.54	■■■□□ 2.8
KHSRP-213	ENST00000619396	PLS1	Q14651	629 aa		32.54	■■■□□ 2.8
KHSRP-213	ENST00000619396	STXBP4	Q6ZWJ1	553 aa		32.54	■■■□□ 2.8
KHSRP-213	ENST00000619396	DIS3	Q9Y2L1	958 aa	Known RBP	32.54	■■■□□ 2.8
KHSRP-213	ENST00000619396	NR2E1	Q9Y466	385 aa		32.54	■■■□□ 2.8
KHSRP-213	ENST00000619396	SRRM3	A6NNA2	597 aa	Predicted RBP	32.53	■■■□□ 2.8
KHSRP-213	ENST00000619396	ALAS1	P13196	640 aa		32.53	■■■□□ 2.8
KHSRP-213	ENST00000619396	CTNNA1	P35221	906 aa	Known RBP	32.53	■■■□□ 2.8
KHSRP-213	ENST00000619396	KCTD19	Q17RG1	926 aa	Predicted RBP	32.53	■■■□□ 2.8
KHSRP-213	ENST00000619396	DALRD3	Q5D0E6	543 aa	Known RBP	32.53	■■■□□ 2.8
KHSRP-213	ENST00000619396	B3GNT9	Q6UX72	402 aa		32.53	■■■□□ 2.8
KHSRP-213	ENST00000619396	SLC9A9	Q8IVB4	645 aa		32.53	■■■□□ 2.8
KHSRP-213	ENST00000619396	CTNNBL1	Q8WYA6	563 aa	Predicted RBP	32.53	■■■□□ 2.8
KHSRP-213	ENST00000619396	ARHGEF26	Q96DR7	871 aa		32.53	■■■□□ 2.8
KHSRP-213	ENST00000619396	LXN	Q9BS40	222 aa		32.53	■■■□□ 2.8
KHSRP-213	ENST00000619396	TEKT3	Q9BXF9	490 aa		32.53	■■■□□ 2.8
KHSRP-213	ENST00000619396	CELF4	Q9BZC1	486 aa	Known RBP	32.53	■■■□□ 2.8
KHSRP-213	ENST00000619396	FGG	P02679	453 aa		32.53	■■■□□ 2.8
KHSRP-213	ENST00000619396	ODR4	Q5SWX8	454 aa		32.53	■■■□□ 2.8
KHSRP-213	ENST00000619396	NAA35	Q5VZE5	725 aa		32.53	■■■□□ 2.8
KHSRP-213	ENST00000619396	LMO3	Q8TAP4	145 aa		32.53	■■■□□ 2.8
KHSRP-213	ENST00000619396	SLC16A10	Q8TF71	515 aa		32.53	■■■□□ 2.8
KHSRP-213	ENST00000619396	EFCC1	Q9HA90	598 aa		32.53	■■■□□ 2.8
KHSRP-213	ENST00000619396	DAAM1	Q9Y4D1	1078 aa		32.53	■■■□□ 2.8
KHSRP-213	ENST00000619396	MYO1F	O00160	1098 aa		32.52	■■■□□ 2.8
KHSRP-213	ENST00000619396	MICALL1	Q8N3F8	863 aa		32.52	■■■□□ 2.8
KHSRP-213	ENST00000619396	PRPF38A	Q8NAV1	312 aa	Known RBP	32.52	■■■□□ 2.8
KHSRP-213	ENST00000619396	TAS2R14	Q9NYV8	317 aa		32.52	■■■□□ 2.8
KHSRP-213	ENST00000619396	CCDC172	P0C7W6	258 aa		32.51	■■■□□ 2.8
KHSRP-213	ENST00000619396	ABCB4	P21439	1286 aa		32.51	■■■□□ 2.8
KHSRP-213	ENST00000619396	MYL7	Q01449	175 aa		32.51	■■■□□ 2.8
KHSRP-213	ENST00000619396	MTMR3	Q13615	1198 aa		32.51	■■■□□ 2.8
KHSRP-213	ENST00000619396	KIF22	Q14807	665 aa		32.51	■■■□□ 2.8
KHSRP-213	ENST00000619396	PHLDB3	Q6NSJ2	640 aa		32.51	■■■□□ 2.8
KHSRP-213	ENST00000619396	TMC3	Q7Z5M5	1100 aa		32.51	■■■□□ 2.8
KHSRP-213	ENST00000619396	FAM114A2	Q9NRY5	505 aa		32.51	■■■□□ 2.8
KHSRP-213	ENST00000619396	GUCY2C	P25092	1073 aa		32.51	■■■□□ 2.79
KHSRP-213	ENST00000619396	SET	Q01105	290 aa	Predicted RBP	32.51	■■■□□ 2.79
KHSRP-213	ENST00000619396	MAPK7	Q13164	816 aa		32.51	■■■□□ 2.79
KHSRP-213	ENST00000619396	SPATS2	Q86XZ4	545 aa	Known RBP	32.51	■■■□□ 2.79
KHSRP-213	ENST00000619396	FMNL3	Q8IVF7	1028 aa		32.51	■■■□□ 2.79
KHSRP-213	ENST00000619396	KCNH7	Q9NS40	1196 aa		32.51	■■■□□ 2.79
KHSRP-213	ENST00000619396	TNFAIP3	P21580	790 aa		32.5	■■■□□ 2.79
KHSRP-213	ENST00000619396	LIG3	P49916	1009 aa		32.5	■■■□□ 2.79
KHSRP-213	ENST00000619396	BFSP1	Q12934	665 aa		32.5	■■■□□ 2.79
KHSRP-213	ENST00000619396	TBC1D10B	Q4KMP7	808 aa	Predicted RBP	32.5	■■■□□ 2.79
KHSRP-213	ENST00000619396	PALB2	Q86YC2	1186 aa		32.5	■■■□□ 2.79
KHSRP-213	ENST00000619396	ZNF473	Q8WTR7	871 aa	Known RBP	32.5	■■■□□ 2.79
KHSRP-213	ENST00000619396	SEC24C	P53992	1094 aa		32.5	■■■□□ 2.79
KHSRP-213	ENST00000619396	BIRC3	Q13489	604 aa		32.5	■■■□□ 2.79
KHSRP-213	ENST00000619396	DAW1	Q8N136	415 aa		32.5	■■■□□ 2.79
KHSRP-213	ENST00000619396	ARFGAP2	Q8N6H7	521 aa		32.5	■■■□□ 2.79
KHSRP-213	ENST00000619396	CCT8L2	Q96SF2	557 aa		32.5	■■■□□ 2.79
KHSRP-213	ENST00000619396	THAP2	Q9H0W7	228 aa		32.5	■■■□□ 2.79
KHSRP-213	ENST00000619396	CARD9	Q9H257	536 aa		32.5	■■■□□ 2.79
KHSRP-213	ENST00000619396	MYH11	P35749	1972 aa		32.49	■■■□□ 2.79
KHSRP-213	ENST00000619396	ANKRD62	A6NC57	917 aa		32.49	■■■□□ 2.79

Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms