RNA–Protein interactions for RNA: ENST00000619035.4

TNFAIP3-209, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 2,267 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-209ENST00000619035 PLEKP08567 350 aaPredicted RBP13.87□□□□□ -0.19
TNFAIP3-209ENST00000619035 TRIM49P0CI25 452 aa13.87□□□□□ -0.19
TNFAIP3-209ENST00000619035 TRIM49CP0CI26 452 aa13.87□□□□□ -0.19
TNFAIP3-209ENST00000619035 SLC26A2P50443 739 aa13.87□□□□□ -0.19
TNFAIP3-209ENST00000619035 POLR2FP61218 127 aaKnown RBP13.87□□□□□ -0.19
TNFAIP3-209ENST00000619035 ERCC6LQ2NKX8 1250 aa13.87□□□□□ -0.19
TNFAIP3-209ENST00000619035 ZNF569Q5MCW4 686 aa13.87□□□□□ -0.19
TNFAIP3-209ENST00000619035 TAPT1Q6NXT6 567 aa13.87□□□□□ -0.19
TNFAIP3-209ENST00000619035 MAP4K3Q8IVH8 894 aa13.87□□□□□ -0.19
TNFAIP3-209ENST00000619035 ASAP3Q8TDY4 903 aa13.87□□□□□ -0.19
TNFAIP3-209ENST00000619035 BICD1Q96G01 975 aa13.87□□□□□ -0.19
TNFAIP3-209ENST00000619035 BORCS6Q96GS4 357 aa13.87□□□□□ -0.19
TNFAIP3-209ENST00000619035 FAM167AQ96KS9 214 aa13.87□□□□□ -0.19
TNFAIP3-209ENST00000619035 CARD6Q9BX69 1037 aa13.87□□□□□ -0.19
TNFAIP3-209ENST00000619035 GPBP1L1Q9HC44 474 aaPredicted RBP13.87□□□□□ -0.19
TNFAIP3-209ENST00000619035 ABT1Q9ULW3 272 aaKnown RBP13.87□□□□□ -0.19
TNFAIP3-209ENST00000619035 TRPC6Q9Y210 931 aa13.87□□□□□ -0.19
TNFAIP3-209ENST00000619035 GOLGA8IPA6NC78 632 aa13.87□□□□□ -0.19
TNFAIP3-209ENST00000619035 GOLGA8JA6NMD2 632 aa13.87□□□□□ -0.19
TNFAIP3-209ENST00000619035 ANKRD63C9JTQ0 380 aa13.87□□□□□ -0.19
TNFAIP3-209ENST00000619035 SNAI1O95863 264 aaPredicted RBP13.87□□□□□ -0.19
TNFAIP3-209ENST00000619035 ACTN1P12814 892 aa13.87□□□□□ -0.19
TNFAIP3-209ENST00000619035 SLC9A1P19634 815 aa13.87□□□□□ -0.19
TNFAIP3-209ENST00000619035 ARHGAP25P42331 645 aa13.87□□□□□ -0.19
TNFAIP3-209ENST00000619035 EXOC3L4Q17RC7 722 aa13.87□□□□□ -0.19
TNFAIP3-209ENST00000619035 SLC9A9Q8IVB4 645 aa13.87□□□□□ -0.19
TNFAIP3-209ENST00000619035 EXOC8Q8IYI6 725 aa13.87□□□□□ -0.19
TNFAIP3-209ENST00000619035 XXYLT1Q8NBI6 393 aa13.87□□□□□ -0.19
TNFAIP3-209ENST00000619035 ZSWIM2Q8NEG5 633 aa13.87□□□□□ -0.19
TNFAIP3-209ENST00000619035 HVCN1Q96D96 273 aa13.87□□□□□ -0.19
TNFAIP3-209ENST00000619035 ERO1AQ96HE7 468 aa13.87□□□□□ -0.19
TNFAIP3-209ENST00000619035 NTPCRQ9BSD7 190 aaKnown RBP13.87□□□□□ -0.19
TNFAIP3-209ENST00000619035 ZHX1Q9UKY1 873 aaPredicted RBP13.87□□□□□ -0.19
TNFAIP3-209ENST00000619035 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.86□□□□□ -0.19
TNFAIP3-209ENST00000619035 HNRNPDLO14979 420 aaKnown RBP13.86□□□□□ -0.19
TNFAIP3-209ENST00000619035 LGR5O75473 907 aa13.86□□□□□ -0.19
TNFAIP3-209ENST00000619035 NOL4O94818 638 aa13.86□□□□□ -0.19
TNFAIP3-209ENST00000619035 TFRCP02786 760 aaKnown RBP13.86□□□□□ -0.19
TNFAIP3-209ENST00000619035 TUBB4AP04350 444 aa13.86□□□□□ -0.19
TNFAIP3-209ENST00000619035 KRT13P13646 458 aa13.86□□□□□ -0.19
TNFAIP3-209ENST00000619035 RFC5P40937 340 aa13.86□□□□□ -0.19
TNFAIP3-209ENST00000619035 ARHGAP1Q07960 439 aa13.86□□□□□ -0.19
TNFAIP3-209ENST00000619035 TARBP2Q15633 366 aaKnown RBP13.86□□□□□ -0.19
TNFAIP3-209ENST00000619035 MEA1Q16626 185 aa13.86□□□□□ -0.19
TNFAIP3-209ENST00000619035 ARHGAP29Q52LW3 1261 aa13.86□□□□□ -0.19
TNFAIP3-209ENST00000619035 PLPPR4Q7Z2D5 763 aa13.86□□□□□ -0.19
TNFAIP3-209ENST00000619035 IFNL1Q8IU54 200 aa13.86□□□□□ -0.19
TNFAIP3-209ENST00000619035 NPLOC4Q8TAT6 608 aa13.86□□□□□ -0.19
TNFAIP3-209ENST00000619035 DEPTORQ8TB45 409 aa13.86□□□□□ -0.19
TNFAIP3-209ENST00000619035 BBXQ8WY36 941 aaPredicted RBP13.86□□□□□ -0.19
TNFAIP3-209ENST00000619035 KCNN1Q92952 543 aa13.86□□□□□ -0.19
TNFAIP3-209ENST00000619035 SAAL1Q96ER3 474 aa13.86□□□□□ -0.19
TNFAIP3-209ENST00000619035 CEP89Q96ST8 783 aa13.86□□□□□ -0.19
TNFAIP3-209ENST00000619035 SUGCTQ9HAC7 445 aa13.86□□□□□ -0.19
TNFAIP3-209ENST00000619035 GCNT4Q9P109 453 aa13.86□□□□□ -0.19
TNFAIP3-209ENST00000619035 CEP72Q9P209 647 aa13.86□□□□□ -0.19
TNFAIP3-209ENST00000619035 EMSYQ7Z589 1322 aa13.85□□□□□ -0.19
TNFAIP3-209ENST00000619035 H0YCG3 227 aa13.85□□□□□ -0.19
TNFAIP3-209ENST00000619035 RRP9O43818 475 aaKnown RBP13.85□□□□□ -0.19
TNFAIP3-209ENST00000619035 GH1P01241 217 aa13.85□□□□□ -0.19
TNFAIP3-209ENST00000619035 GLRA2P23416 452 aa13.85□□□□□ -0.19
TNFAIP3-209ENST00000619035 CNGA1P29973 690 aa13.85□□□□□ -0.19
TNFAIP3-209ENST00000619035 BFSP1Q12934 665 aa13.85□□□□□ -0.19
TNFAIP3-209ENST00000619035 PLCB4Q15147 1175 aa13.85□□□□□ -0.19
TNFAIP3-209ENST00000619035 GBP6Q6ZN66 633 aa13.85□□□□□ -0.19
TNFAIP3-209ENST00000619035 PAXIP1Q6ZW49 1069 aaPredicted RBP13.85□□□□□ -0.19
TNFAIP3-209ENST00000619035 SLC35F6Q8N357 371 aa13.85□□□□□ -0.19
TNFAIP3-209ENST00000619035 PDCL2Q8N4E4 241 aa13.85□□□□□ -0.19
TNFAIP3-209ENST00000619035 ATP8B4Q8TF62 1192 aa13.85□□□□□ -0.19
TNFAIP3-209ENST00000619035 BAP1Q92560 729 aa13.85□□□□□ -0.19
TNFAIP3-209ENST00000619035 TINF2Q9BSI4 451 aa13.85□□□□□ -0.19
TNFAIP3-209ENST00000619035 SMARCAD1Q9H4L7 1026 aa13.85□□□□□ -0.19
TNFAIP3-209ENST00000619035 USP20Q9Y2K6 914 aa13.85□□□□□ -0.19
TNFAIP3-209ENST00000619035 KIF5CO60282 957 aa13.85□□□□□ -0.19
TNFAIP3-209ENST00000619035 TLR2O60603 784 aa13.85□□□□□ -0.19
TNFAIP3-209ENST00000619035 ADSSP30520 456 aa13.85□□□□□ -0.19
TNFAIP3-209ENST00000619035 CYP27A1Q02318 531 aa13.85□□□□□ -0.19
TNFAIP3-209ENST00000619035 DRP2Q13474 957 aa13.85□□□□□ -0.19
TNFAIP3-209ENST00000619035 LAMC2Q13753 1193 aa13.85□□□□□ -0.19
TNFAIP3-209ENST00000619035 PDXDC1Q6P996 788 aa13.85□□□□□ -0.19
TNFAIP3-209ENST00000619035 LRRC71Q8N4P6 559 aa13.85□□□□□ -0.19
TNFAIP3-209ENST00000619035 TRAPPC12Q8WVT3 735 aa13.85□□□□□ -0.19
TNFAIP3-209ENST00000619035 POMGNT1Q8WZA1 660 aa13.85□□□□□ -0.19
TNFAIP3-209ENST00000619035 EMID1Q96A84 441 aaPredicted RBP13.85□□□□□ -0.19
TNFAIP3-209ENST00000619035 NHEJ1Q9H9Q4 299 aaPredicted RBP13.85□□□□□ -0.19
TNFAIP3-209ENST00000619035 ARHGAP28Q9P2N2 729 aa13.85□□□□□ -0.19
TNFAIP3-209ENST00000619035 PLAGL2Q9UPG8 496 aa13.85□□□□□ -0.19
TNFAIP3-209ENST00000619035 FAM155AB1AL88 458 aaPredicted RBP13.84□□□□□ -0.19
TNFAIP3-209ENST00000619035 PON1P27169 355 aa13.84□□□□□ -0.19
TNFAIP3-209ENST00000619035 ARL2P36404 184 aa13.84□□□□□ -0.19
TNFAIP3-209ENST00000619035 NAMPTP43490 491 aa13.84□□□□□ -0.19
TNFAIP3-209ENST00000619035 TM4SF4P48230 202 aa13.84□□□□□ -0.19
TNFAIP3-209ENST00000619035 FMO5P49326 533 aa13.84□□□□□ -0.19
TNFAIP3-209ENST00000619035 DLG4P78352 724 aa13.84□□□□□ -0.19
TNFAIP3-209ENST00000619035 STRN3Q13033 797 aa13.84□□□□□ -0.19
TNFAIP3-209ENST00000619035 RAPGEF1Q13905 1077 aa13.84□□□□□ -0.19
TNFAIP3-209ENST00000619035 PPP2R5AQ15172 486 aa13.84□□□□□ -0.19
TNFAIP3-209ENST00000619035 C17orf99Q6UX52 265 aa13.84□□□□□ -0.19
TNFAIP3-209ENST00000619035 TAS1R3Q7RTX0 852 aa13.84□□□□□ -0.19
TNFAIP3-209ENST00000619035 C12orf56Q8IXR9 622 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms