RNA–Protein interactions for RNA: ENST00000618621.4

LPP-221, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

TSL 1 (best) BASIC

Gene LPP, Length 18,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-221ENST00000618621 APOBEC2Q9Y235 224 aaKnown RBP3.26□□□□□ -1.89
LPP-221ENST00000618621 NCF2P19878 526 aaPredicted RBP3.26□□□□□ -1.89
LPP-221ENST00000618621 OSBPP22059 807 aa3.26□□□□□ -1.89
LPP-221ENST00000618621 CRKLP46109 303 aaKnown RBP3.26□□□□□ -1.89
LPP-221ENST00000618621 SEC24CP53992 1094 aa3.26□□□□□ -1.89
LPP-221ENST00000618621 FAM160B2Q86V87 743 aa3.26□□□□□ -1.89
LPP-221ENST00000618621 PACS2Q86VP3 889 aa3.26□□□□□ -1.89
LPP-221ENST00000618621 ADGRF4Q8IZF3 695 aa3.26□□□□□ -1.89
LPP-221ENST00000618621 CNKSR1Q969H4 720 aa3.26□□□□□ -1.89
LPP-221ENST00000618621 FAM53CQ9NYF3 392 aa3.26□□□□□ -1.89
LPP-221ENST00000618621 IP6K2Q9UHH9 426 aa3.26□□□□□ -1.89
LPP-221ENST00000618621 SCINQ9Y6U3 715 aa3.26□□□□□ -1.89
LPP-221ENST00000618621 RTTNQ86VV8 2226 aa3.26□□□□□ -1.89
LPP-221ENST00000618621 DNMT1P26358 1616 aaKnown RBP3.26□□□□□ -1.89
LPP-221ENST00000618621 TBXAS1P24557 533 aaPredicted RBP3.26□□□□□ -1.89
LPP-221ENST00000618621 CCND2P30279 289 aa3.26□□□□□ -1.89
LPP-221ENST00000618621 SLC16A2P36021 539 aa3.26□□□□□ -1.89
LPP-221ENST00000618621 PPP2R5DQ14738 602 aa3.26□□□□□ -1.89
LPP-221ENST00000618621 MMEL1Q495T6 779 aa3.26□□□□□ -1.89
LPP-221ENST00000618621 SUGP1Q8IWZ8 645 aaKnown RBP3.26□□□□□ -1.89
LPP-221ENST00000618621 GJD4Q96KN9 370 aaPredicted RBP3.26□□□□□ -1.89
LPP-221ENST00000618621 SLC40A1Q9NP59 571 aa3.26□□□□□ -1.89
LPP-221ENST00000618621 HESX1Q9UBX0 185 aa3.26□□□□□ -1.89
LPP-221ENST00000618621 MINPP1Q9UNW1 487 aa3.26□□□□□ -1.89
LPP-221ENST00000618621 SOX5P35711 763 aa3.26□□□□□ -1.89
LPP-221ENST00000618621 BIRC2Q13490 618 aa3.26□□□□□ -1.89
LPP-221ENST00000618621 TEDDM1Q5T9Z0 273 aa3.26□□□□□ -1.89
LPP-221ENST00000618621 SRBD1Q8N5C6 995 aaKnown RBP3.26□□□□□ -1.89
LPP-221ENST00000618621 ALKBH8Q96BT7 664 aaKnown RBP3.26□□□□□ -1.89
LPP-221ENST00000618621 RNPC3Q96LT9 517 aaKnown RBP3.26□□□□□ -1.89
LPP-221ENST00000618621 CCDC138Q96M89 665 aa3.26□□□□□ -1.89
LPP-221ENST00000618621 AGPAT1Q99943 283 aa3.26□□□□□ -1.89
LPP-221ENST00000618621 GCNT4Q9P109 453 aa3.26□□□□□ -1.89
LPP-221ENST00000618621 MYMKA6NI61 221 aa3.26□□□□□ -1.89
LPP-221ENST00000618621 CAPN9O14815 690 aa3.26□□□□□ -1.89
LPP-221ENST00000618621 C21orf2O43822 256 aa3.26□□□□□ -1.89
LPP-221ENST00000618621 FAM107AO95990 144 aa3.26□□□□□ -1.89
LPP-221ENST00000618621 PSPC1Q8WXF1 523 aaKnown RBP3.26□□□□□ -1.89
LPP-221ENST00000618621 RPS6KC1Q96S38 1066 aa3.26□□□□□ -1.89
LPP-221ENST00000618621 CCDC68Q9H2F9 335 aa3.26□□□□□ -1.89
LPP-221ENST00000618621 GSG1L2A8MUP6 293 aa3.26□□□□□ -1.89
LPP-221ENST00000618621 ELF1P32519 619 aa3.26□□□□□ -1.89
LPP-221ENST00000618621 TMPRSS15P98073 1019 aa3.26□□□□□ -1.89
LPP-221ENST00000618621 STAT4Q14765 748 aa3.26□□□□□ -1.89
LPP-221ENST00000618621 TXNRD1Q16881 649 aa3.26□□□□□ -1.89
LPP-221ENST00000618621 C4orf46Q504U0 113 aa3.26□□□□□ -1.89
LPP-221ENST00000618621 GIMAP8Q8ND71 665 aaPredicted RBP3.26□□□□□ -1.89
LPP-221ENST00000618621 SMCR8Q8TEV9 937 aaPredicted RBP3.26□□□□□ -1.89
LPP-221ENST00000618621 CMTM5Q96DZ9 223 aa3.26□□□□□ -1.89
LPP-221ENST00000618621 SPC25Q9HBM1 224 aa3.26□□□□□ -1.89
LPP-221ENST00000618621 DDX39AO00148 427 aaKnown RBP3.25□□□□□ -1.89
LPP-221ENST00000618621 MCAMP43121 646 aa3.25□□□□□ -1.89
LPP-221ENST00000618621 BBS9Q3SYG4 887 aa3.25□□□□□ -1.89
LPP-221ENST00000618621 SGMS1Q86VZ5 419 aa3.25□□□□□ -1.89
LPP-221ENST00000618621 LONP2Q86WA8 852 aa3.25□□□□□ -1.89
LPP-221ENST00000618621 TTC30BQ8N4P2 665 aa3.25□□□□□ -1.89
LPP-221ENST00000618621 ADGRL3Q9HAR2 1447 aa3.25□□□□□ -1.89
LPP-221ENST00000618621 CFLARO15519 480 aa3.25□□□□□ -1.89
LPP-221ENST00000618621 OATP04181 439 aa3.25□□□□□ -1.89
LPP-221ENST00000618621 PHEXP78562 749 aa3.25□□□□□ -1.89
LPP-221ENST00000618621 PTPROQ16827 1216 aa3.25□□□□□ -1.89
LPP-221ENST00000618621 SUPT20HL1Q3ZLR7 823 aa3.25□□□□□ -1.89
LPP-221ENST00000618621 KLHL23Q8NBE8 558 aa3.25□□□□□ -1.89
LPP-221ENST00000618621 DTNBP1Q96EV8 351 aa3.25□□□□□ -1.89
LPP-221ENST00000618621 ZFYVE16Q7Z3T8 1539 aa3.25□□□□□ -1.89
LPP-221ENST00000618621 NBPF26B4DH59 902 aa3.25□□□□□ -1.89
LPP-221ENST00000618621 TRPA1O75762 1119 aa3.25□□□□□ -1.89
LPP-221ENST00000618621 TNFAIP1Q13829 316 aa3.25□□□□□ -1.89
LPP-221ENST00000618621 RCN2Q14257 317 aa3.25□□□□□ -1.89
LPP-221ENST00000618621 R3HDM1Q15032 1099 aaKnown RBP3.25□□□□□ -1.89
LPP-221ENST00000618621 DIXDC1Q155Q3 683 aa3.25□□□□□ -1.89
LPP-221ENST00000618621 NBPF15Q8N660 670 aa3.25□□□□□ -1.89
LPP-221ENST00000618621 GIPC2Q8TF65 315 aa3.25□□□□□ -1.89
LPP-221ENST00000618621 DYNLL2Q96FJ2 89 aa3.25□□□□□ -1.89
LPP-221ENST00000618621 CFAP36Q96G28 342 aa3.25□□□□□ -1.89
LPP-221ENST00000618621 TRIM9Q9C026 710 aa3.25□□□□□ -1.89
LPP-221ENST00000618621 ATP7AQ04656 1500 aa3.25□□□□□ -1.89
LPP-221ENST00000618621 CYP2D7A0A087X1C5 515 aa3.25□□□□□ -1.89
LPP-221ENST00000618621 GNGT2O14610 69 aa3.25□□□□□ -1.89
LPP-221ENST00000618621 PSMA4P25789 261 aaKnown RBP3.25□□□□□ -1.89
LPP-221ENST00000618621 PEX19P40855 299 aa3.25□□□□□ -1.89
LPP-221ENST00000618621 PRELPP51888 382 aa3.25□□□□□ -1.89
LPP-221ENST00000618621 KPNA2P52292 529 aaKnown RBP3.25□□□□□ -1.89
LPP-221ENST00000618621 TAP1Q03518 808 aa3.25□□□□□ -1.89
LPP-221ENST00000618621 C3orf62Q6ZUJ4 267 aa3.25□□□□□ -1.89
LPP-221ENST00000618621 ENOSF1Q7L5Y1 443 aa3.25□□□□□ -1.89
LPP-221ENST00000618621 RBM41Q96IZ5 413 aaKnown RBP3.25□□□□□ -1.89
LPP-221ENST00000618621 INTS2Q9H0H0 1204 aaKnown RBP3.25□□□□□ -1.89
LPP-221ENST00000618621 DMGDHQ9UI17 866 aaKnown RBP3.25□□□□□ -1.89
LPP-221ENST00000618621 ATP10DQ9P241 1426 aa3.25□□□□□ -1.89
LPP-221ENST00000618621 GSTA4O15217 222 aa3.25□□□□□ -1.89
LPP-221ENST00000618621 KRT38O76015 456 aa3.25□□□□□ -1.89
LPP-221ENST00000618621 BMP3P12645 472 aa3.25□□□□□ -1.89
LPP-221ENST00000618621 WDR93Q6P2C0 686 aa3.25□□□□□ -1.89
LPP-221ENST00000618621 RAPH1Q70E73 1250 aa3.25□□□□□ -1.89
LPP-221ENST00000618621 LRRC47Q8N1G4 583 aaKnown RBP3.25□□□□□ -1.89
LPP-221ENST00000618621 STAG2Q8N3U4 1231 aa3.25□□□□□ -1.89
LPP-221ENST00000618621 SH3RF3Q8TEJ3 882 aaPredicted RBP3.25□□□□□ -1.89
LPP-221ENST00000618621 MAML1Q92585 1016 aa3.25□□□□□ -1.89
LPP-221ENST00000618621 ARHGEF1Q92888 912 aaKnown RBP3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms