RNA–Protein interactions for RNA: ENST00000618534.4

NEK3-208, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene NEK3, Length 2,414 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-208ENST00000618534 ZKSCAN4Q969J2 545 aaPredicted RBP22.05■■□□□ 1.12
NEK3-208ENST00000618534 MYCBPQ99417 103 aaPredicted RBP22.05■■□□□ 1.12
NEK3-208ENST00000618534 A1CFQ9NQ94 594 aaKnown RBP22.05■■□□□ 1.12
NEK3-208ENST00000618534 SMIM23A6NLE4 172 aa22.05■■□□□ 1.12
NEK3-208ENST00000618534 FOXN3O00409 490 aaPredicted RBP22.05■■□□□ 1.12
NEK3-208ENST00000618534 CHUKO15111 745 aa22.05■■□□□ 1.12
NEK3-208ENST00000618534 CYP3A4P08684 503 aa22.05■■□□□ 1.12
NEK3-208ENST00000618534 CCDC172P0C7W6 258 aa22.05■■□□□ 1.12
NEK3-208ENST00000618534 SCTRP47872 440 aa22.05■■□□□ 1.12
NEK3-208ENST00000618534 MARCKSL1P49006 195 aa22.05■■□□□ 1.12
NEK3-208ENST00000618534 GSCP56915 257 aaPredicted RBP22.05■■□□□ 1.12
NEK3-208ENST00000618534 KIF22Q14807 665 aa22.05■■□□□ 1.12
NEK3-208ENST00000618534 UBAP2Q5T6F2 1119 aaKnown RBP22.05■■□□□ 1.12
NEK3-208ENST00000618534 OTOP1Q7RTM1 612 aa22.05■■□□□ 1.12
NEK3-208ENST00000618534 FAM178BQ8IXR5 827 aa22.05■■□□□ 1.12
NEK3-208ENST00000618534 KRT35Q92764 455 aa22.05■■□□□ 1.12
NEK3-208ENST00000618534 SELENOSQ9BQE4 189 aa22.05■■□□□ 1.12
NEK3-208ENST00000618534 TUFT1Q9NNX1 390 aa22.05■■□□□ 1.12
NEK3-208ENST00000618534 BCS1LQ9Y276 419 aa22.05■■□□□ 1.12
NEK3-208ENST00000618534 ALG6Q9Y672 507 aa22.05■■□□□ 1.12
NEK3-208ENST00000618534 TLDC2A0PJX2 215 aa22.04■■□□□ 1.12
NEK3-208ENST00000618534 CHN1P15882 459 aa22.04■■□□□ 1.12
NEK3-208ENST00000618534 SH3BP5LQ7L8J4 393 aa22.04■■□□□ 1.12
NEK3-208ENST00000618534 CENPTQ96BT3 561 aa22.04■■□□□ 1.12
NEK3-208ENST00000618534 AGPAT1Q99943 283 aa22.04■■□□□ 1.12
NEK3-208ENST00000618534 GRHL1Q9NZI5 618 aa22.04■■□□□ 1.12
NEK3-208ENST00000618534 RPTORQ8N122 1335 aa22.04■■□□□ 1.12
NEK3-208ENST00000618534 SMCHD1A6NHR9 2005 aa22.04■■□□□ 1.12
NEK3-208ENST00000618534 PTGIRP43119 386 aa22.04■■□□□ 1.12
NEK3-208ENST00000618534 PPP2R5AQ15172 486 aa22.04■■□□□ 1.12
NEK3-208ENST00000618534 LACTB2Q53H82 288 aaPredicted RBP22.04■■□□□ 1.12
NEK3-208ENST00000618534 LRCH2Q5VUJ6 765 aa22.04■■□□□ 1.12
NEK3-208ENST00000618534 CYB5D1Q6P9G0 228 aa22.04■■□□□ 1.12
NEK3-208ENST00000618534 FUKQ8N0W3 1084 aa22.04■■□□□ 1.12
NEK3-208ENST00000618534 RDH13Q8NBN7 331 aa22.04■■□□□ 1.12
NEK3-208ENST00000618534 CCT6BQ92526 530 aa22.04■■□□□ 1.12
NEK3-208ENST00000618534 ADAM7Q9H2U9 754 aa22.04■■□□□ 1.12
NEK3-208ENST00000618534 TMEM110-MUSTN1A8MSY1 372 aa22.03■■□□□ 1.12
NEK3-208ENST00000618534 PHF2O75151 1096 aa22.03■■□□□ 1.12
NEK3-208ENST00000618534 GPATCH11Q8N954 259 aa22.03■■□□□ 1.12
NEK3-208ENST00000618534 BANK1Q8NDB2 785 aa22.03■■□□□ 1.12
NEK3-208ENST00000618534 GMCL1Q96IK5 515 aa22.03■■□□□ 1.12
NEK3-208ENST00000618534 AZI2Q9H6S1 392 aa22.03■■□□□ 1.12
NEK3-208ENST00000618534 PI4KBQ9UBF8 816 aa22.03■■□□□ 1.12
NEK3-208ENST00000618534 RASAL2Q9UJF2 1139 aa22.03■■□□□ 1.12
NEK3-208ENST00000618534 MMEP08473 750 aa22.02■■□□□ 1.12
NEK3-208ENST00000618534 RPL21P46778 160 aaKnown RBP22.02■■□□□ 1.12
NEK3-208ENST00000618534 BFSP1Q12934 665 aa22.02■■□□□ 1.12
NEK3-208ENST00000618534 SLC29A2Q14542 456 aa22.02■■□□□ 1.12
NEK3-208ENST00000618534 KCTD17Q8N5Z5 321 aa22.02■■□□□ 1.12
NEK3-208ENST00000618534 PRELID2Q8N945 189 aa22.02■■□□□ 1.12
NEK3-208ENST00000618534 GMCL1P1Q8NEA9 526 aa22.02■■□□□ 1.12
NEK3-208ENST00000618534 HVCN1Q96D96 273 aa22.02■■□□□ 1.12
NEK3-208ENST00000618534 HOOK2Q96ED9 719 aa22.02■■□□□ 1.12
NEK3-208ENST00000618534 PGM2Q96G03 612 aa22.02■■□□□ 1.12
NEK3-208ENST00000618534 ZNF317Q96PQ6 595 aaPredicted RBP22.02■■□□□ 1.12
NEK3-208ENST00000618534 CTTNBP2NLQ9P2B4 639 aa22.02■■□□□ 1.12
NEK3-208ENST00000618534 WRAP73Q9P2S5 460 aaPredicted RBP22.02■■□□□ 1.12
NEK3-208ENST00000618534 FAM198AQ9UFP1 575 aa22.02■■□□□ 1.12
NEK3-208ENST00000618534 UBR3Q6ZT12 1888 aa22.02■■□□□ 1.12
NEK3-208ENST00000618534 UBE4BO95155 1302 aa22.02■■□□□ 1.12
NEK3-208ENST00000618534 SYNGAP1Q96PV0 1343 aa22.02■■□□□ 1.12
NEK3-208ENST00000618534 PSMD10O75832 226 aa22.02■■□□□ 1.12
NEK3-208ENST00000618534 MAP2K2P36507 400 aa22.02■■□□□ 1.12
NEK3-208ENST00000618534 MMP13P45452 471 aa22.02■■□□□ 1.12
NEK3-208ENST00000618534 ZNF131P52739 623 aa22.02■■□□□ 1.12
NEK3-208ENST00000618534 DRG2P55039 364 aaKnown RBP22.02■■□□□ 1.12
NEK3-208ENST00000618534 ODR4Q5SWX8 454 aa22.02■■□□□ 1.12
NEK3-208ENST00000618534 TMEM179Q6ZVK1 233 aa22.02■■□□□ 1.12
NEK3-208ENST00000618534 FMNL3Q8IVF7 1028 aa22.02■■□□□ 1.12
NEK3-208ENST00000618534 RHOT2Q8IXI1 618 aa22.02■■□□□ 1.12
NEK3-208ENST00000618534 LMO3Q8TAP4 145 aa22.02■■□□□ 1.12
NEK3-208ENST00000618534 ATXN2LQ8WWM7 1075 aaKnown RBP22.02■■□□□ 1.12
NEK3-208ENST00000618534 SLTMQ9NWH9 1034 aaKnown RBP eCLIP22.02■■□□□ 1.12
NEK3-208ENST00000618534 EXOC3O60645 756 aa22.01■■□□□ 1.11
NEK3-208ENST00000618534 IFI35P80217 286 aaPredicted RBP22.01■■□□□ 1.11
NEK3-208ENST00000618534 TATDN1Q6P1N9 297 aa22.01■■□□□ 1.11
NEK3-208ENST00000618534 TTC27Q6P3X3 843 aa22.01■■□□□ 1.11
NEK3-208ENST00000618534 ZDHHC14Q8IZN3 488 aa22.01■■□□□ 1.11
NEK3-208ENST00000618534 UHMK1Q8TAS1 419 aaKnown RBP22.01■■□□□ 1.11
NEK3-208ENST00000618534 SEMA4AQ9H3S1 761 aa22.01■■□□□ 1.11
NEK3-208ENST00000618534 SEL1LQ9UBV2 794 aa22.01■■□□□ 1.11
NEK3-208ENST00000618534 CHORDC1Q9UHD1 332 aaPredicted RBP22.01■■□□□ 1.11
NEK3-208ENST00000618534 KLRG2A4D1S0 409 aaPredicted RBP22.01■■□□□ 1.11
NEK3-208ENST00000618534 CCDC169A6NNP5 214 aa22.01■■□□□ 1.11
NEK3-208ENST00000618534 FTLP02792 175 aaPredicted RBP22.01■■□□□ 1.11
NEK3-208ENST00000618534 BMP3P12645 472 aa22.01■■□□□ 1.11
NEK3-208ENST00000618534 HADHBP55084 474 aaKnown RBP22.01■■□□□ 1.11
NEK3-208ENST00000618534 CLUL1Q15846 466 aa22.01■■□□□ 1.11
NEK3-208ENST00000618534 C11orf63Q6NUN7 778 aa22.01■■□□□ 1.11
NEK3-208ENST00000618534 PARP9Q8IXQ6 854 aa22.01■■□□□ 1.11
NEK3-208ENST00000618534 ZDHHC15Q96MV8 337 aa22.01■■□□□ 1.11
NEK3-208ENST00000618534 ZSWIM1Q9BR11 485 aa22.01■■□□□ 1.11
NEK3-208ENST00000618534 KCNQ5Q9NR82 932 aa22.01■■□□□ 1.11
NEK3-208ENST00000618534 RBBP6Q7Z6E9 1792 aaKnown RBP22.01■■□□□ 1.11
NEK3-208ENST00000618534 POLRMTO00411 1230 aaKnown RBP22■■□□□ 1.11
NEK3-208ENST00000618534 RGS16O15492 202 aaPredicted RBP22■■□□□ 1.11
NEK3-208ENST00000618534 CHRNA3P32297 505 aa22■■□□□ 1.11
NEK3-208ENST00000618534 DLG4P78352 724 aa22■■□□□ 1.11
NEK3-208ENST00000618534 SF3A3Q12874 501 aaKnown RBP eCLIP22■■□□□ 1.112e-6■■□□□ 13.9
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms