RNA–Protein interactions for RNA: ENST00000618375.1

SMC5-204, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 5

Gene SMC5, Length 223 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-204ENST00000618375 USP6NLQ92738 828 aa3.81□□□□□ -1.8
SMC5-204ENST00000618375 CDKL2Q92772 493 aa3.81□□□□□ -1.8
SMC5-204ENST00000618375 HPS3Q969F9 1004 aa3.81□□□□□ -1.8
SMC5-204ENST00000618375 DHX58Q96C10 678 aa3.81□□□□□ -1.8
SMC5-204ENST00000618375 IQCDQ96DY2 449 aa3.81□□□□□ -1.8
SMC5-204ENST00000618375 CLMNQ96JQ2 1002 aa3.81□□□□□ -1.8
SMC5-204ENST00000618375 CCDC42Q96M95 316 aa3.81□□□□□ -1.8
SMC5-204ENST00000618375 OLFM3Q96PB7 478 aa3.81□□□□□ -1.8
SMC5-204ENST00000618375 LRRC27Q9C0I9 530 aa3.81□□□□□ -1.8
SMC5-204ENST00000618375 DRC3Q9H069 523 aa3.81□□□□□ -1.8
SMC5-204ENST00000618375 LRRC4CQ9HCJ2 640 aa3.81□□□□□ -1.8
SMC5-204ENST00000618375 KCNMB3Q9NPA1 279 aa3.81□□□□□ -1.8
SMC5-204ENST00000618375 IL1RAPL1Q9NZN1 696 aa3.81□□□□□ -1.8
SMC5-204ENST00000618375 CHPF2Q9P2E5 772 aa3.81□□□□□ -1.8
SMC5-204ENST00000618375 LARSQ9P2J5 1176 aaKnown RBP3.81□□□□□ -1.8
SMC5-204ENST00000618375 STK39Q9UEW8 545 aa3.81□□□□□ -1.8
SMC5-204ENST00000618375 SAP30BPQ9UHR5 308 aaKnown RBP3.81□□□□□ -1.8
SMC5-204ENST00000618375 CCPG1Q9ULG6 757 aa3.81□□□□□ -1.8
SMC5-204ENST00000618375 SLC12A4Q9UP95 1085 aa3.81□□□□□ -1.8
SMC5-204ENST00000618375 LZTS1Q9Y250 596 aa3.81□□□□□ -1.8
SMC5-204ENST00000618375 CNPY2Q9Y2B0 182 aa3.81□□□□□ -1.8
SMC5-204ENST00000618375 FAM32AQ9Y421 112 aaKnown RBP3.81□□□□□ -1.8
SMC5-204ENST00000618375 RNF114Q9Y508 228 aa3.81□□□□□ -1.8
SMC5-204ENST00000618375 SAMM50Q9Y512 469 aa3.81□□□□□ -1.8
SMC5-204ENST00000618375 LRRC42Q9Y546 428 aa3.81□□□□□ -1.8
SMC5-204ENST00000618375 NUMBLQ9Y6R0 609 aa3.81□□□□□ -1.8
SMC5-204ENST00000618375 SCINQ9Y6U3 715 aa3.81□□□□□ -1.8
SMC5-204ENST00000618375 NESP48681 1621 aa3.81□□□□□ -1.8
SMC5-204ENST00000618375 CARMIL2Q6F5E8 1435 aa3.8□□□□□ -1.8
SMC5-204ENST00000618375 CARMIL1Q5VZK9 1371 aa3.8□□□□□ -1.8
SMC5-204ENST00000618375 ABCC12Q96J65 1359 aa3.8□□□□□ -1.8
SMC5-204ENST00000618375 JCADQ9P266 1359 aa3.8□□□□□ -1.8
SMC5-204ENST00000618375 KRTAP9-6A0A140TA67 174 aa3.8□□□□□ -1.8
SMC5-204ENST00000618375 CCDC194A0A1B0GVG4 234 aa3.8□□□□□ -1.8
SMC5-204ENST00000618375 A0A1W2PP55 124 aa3.8□□□□□ -1.8
SMC5-204ENST00000618375 KANSL1LA0AUZ9 987 aa3.8□□□□□ -1.8
SMC5-204ENST00000618375 CTAGE15A4D2H0 777 aa3.8□□□□□ -1.8
SMC5-204ENST00000618375 E9PMD0 336 aa3.8□□□□□ -1.8
SMC5-204ENST00000618375 SPECC1L-ADORA2AF8WAN1 911 aa3.8□□□□□ -1.8
SMC5-204ENST00000618375 GOLGA8TH3BQL2 631 aa3.8□□□□□ -1.8
SMC5-204ENST00000618375 AGPSO00116 658 aa3.8□□□□□ -1.8
SMC5-204ENST00000618375 MATN2O00339 956 aa3.8□□□□□ -1.8
SMC5-204ENST00000618375 KMOO15229 486 aa3.8□□□□□ -1.8
SMC5-204ENST00000618375 TEX28O15482 410 aa3.8□□□□□ -1.8
SMC5-204ENST00000618375 DIAPH1O60610 1272 aaKnown RBP3.8□□□□□ -1.8
SMC5-204ENST00000618375 ICMTO60725 284 aa3.8□□□□□ -1.8
SMC5-204ENST00000618375 CBFA2T3O75081 653 aa3.8□□□□□ -1.8
SMC5-204ENST00000618375 SUPT3HO75486 399 aa3.8□□□□□ -1.8
SMC5-204ENST00000618375 TIAF1O95411 115 aa3.8□□□□□ -1.8
SMC5-204ENST00000618375 DLGAP3O95886 979 aa3.8□□□□□ -1.8
SMC5-204ENST00000618375 KRT14P02533 472 aa3.8□□□□□ -1.8
SMC5-204ENST00000618375 ASLP04424 464 aa3.8□□□□□ -1.8
SMC5-204ENST00000618375 F13BP05160 661 aa3.8□□□□□ -1.8
SMC5-204ENST00000618375 ITGA2BP08514 1039 aa3.8□□□□□ -1.8
SMC5-204ENST00000618375 CTAGE8P0CG41 777 aa3.8□□□□□ -1.8
SMC5-204ENST00000618375 GOLGA8HP0CJ92 632 aa3.8□□□□□ -1.8
SMC5-204ENST00000618375 ADH5P11766 374 aa3.8□□□□□ -1.8
SMC5-204ENST00000618375 KRT4P19013 534 aa3.8□□□□□ -1.8
SMC5-204ENST00000618375 CALB2P22676 271 aa3.8□□□□□ -1.8
SMC5-204ENST00000618375 MAN1A1P33908 653 aa3.8□□□□□ -1.8
SMC5-204ENST00000618375 ETV3P41162 512 aa3.8□□□□□ -1.8
SMC5-204ENST00000618375 HALP42357 657 aa3.8□□□□□ -1.8
SMC5-204ENST00000618375 GRIA4P48058 902 aa3.8□□□□□ -1.8
SMC5-204ENST00000618375 SERPINB4P48594 390 aa3.8□□□□□ -1.8
SMC5-204ENST00000618375 POLE2P56282 527 aa3.8□□□□□ -1.8
SMC5-204ENST00000618375 KRT85P78386 507 aa3.8□□□□□ -1.8
SMC5-204ENST00000618375 DR1Q01658 176 aa3.8□□□□□ -1.8
SMC5-204ENST00000618375 DPYSQ14117 519 aa3.8□□□□□ -1.8
SMC5-204ENST00000618375 DDB1Q16531 1140 aa3.8□□□□□ -1.8
SMC5-204ENST00000618375 CPSF6Q16630 551 aaKnown RBP eCLIP3.8□□□□□ -1.8
SMC5-204ENST00000618375 GSTA3Q16772 222 aa3.8□□□□□ -1.8
SMC5-204ENST00000618375 SPRED3Q2MJR0 410 aa3.8□□□□□ -1.8
SMC5-204ENST00000618375 RABL6Q3YEC7 729 aaPredicted RBP3.8□□□□□ -1.8
SMC5-204ENST00000618375 GLE1Q53GS7 698 aaKnown RBP3.8□□□□□ -1.8
SMC5-204ENST00000618375 SYCP2LQ5T4T6 812 aa3.8□□□□□ -1.8
SMC5-204ENST00000618375 TTC22Q5TAA0 569 aa3.8□□□□□ -1.8
SMC5-204ENST00000618375 DEPDC1Q5TB30 811 aa3.8□□□□□ -1.8
SMC5-204ENST00000618375 NDUFAF5Q5TEU4 345 aa3.8□□□□□ -1.8
SMC5-204ENST00000618375 SYDE2Q5VT97 1194 aa3.8□□□□□ -1.8
SMC5-204ENST00000618375 OR52E8Q6IFG1 317 aa3.8□□□□□ -1.8
SMC5-204ENST00000618375 CDPF1Q6NVV7 123 aa3.8□□□□□ -1.8
SMC5-204ENST00000618375 CCDC174Q6PII3 467 aa3.8□□□□□ -1.8
SMC5-204ENST00000618375 LVRNQ6Q4G3 990 aa3.8□□□□□ -1.8
SMC5-204ENST00000618375 CTAGE6Q86UF2 777 aa3.8□□□□□ -1.8
SMC5-204ENST00000618375 NLRP14Q86W24 1093 aa3.8□□□□□ -1.8
SMC5-204ENST00000618375 GRAMD2AQ8IUY3 354 aa3.8□□□□□ -1.8
SMC5-204ENST00000618375 CCNJLQ8IV13 435 aa3.8□□□□□ -1.8
SMC5-204ENST00000618375 PASD1Q8IV76 773 aa3.8□□□□□ -1.8
SMC5-204ENST00000618375 CTAGE4Q8IX94 777 aa3.8□□□□□ -1.8
SMC5-204ENST00000618375 RHOT2Q8IXI1 618 aa3.8□□□□□ -1.8
SMC5-204ENST00000618375 GALNT12Q8IXK2 581 aa3.8□□□□□ -1.8
SMC5-204ENST00000618375 DCLK2Q8N568 766 aa3.8□□□□□ -1.8
SMC5-204ENST00000618375 ARFGAP2Q8N6H7 521 aa3.8□□□□□ -1.8
SMC5-204ENST00000618375 LINC00469Q8N7U9 141 aa3.8□□□□□ -1.8
SMC5-204ENST00000618375 RETREG2Q8NC44 543 aa3.8□□□□□ -1.8
SMC5-204ENST00000618375 NOA1Q8NC60 698 aaKnown RBP3.8□□□□□ -1.8
SMC5-204ENST00000618375 C2CD4AQ8NCU7 369 aaPredicted RBP3.8□□□□□ -1.8
SMC5-204ENST00000618375 CCDC148Q8NFR7 591 aa3.8□□□□□ -1.8
SMC5-204ENST00000618375 LILRB1Q8NHL6 650 aaPredicted RBP3.8□□□□□ -1.8
SMC5-204ENST00000618375 AGAP11Q8TF27 550 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms