RNA–Protein interactions for RNA: ENST00000618081.4

CCDC144B-208, Transcript of coiled-coil domain containing 144B (pseudogene), humanhuman

TSL 1 (best) BASIC

Gene CCDC144B, Length 8,688 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144B-208ENST00000618081 TAGAPQ8N103 731 aa11.88□□□□□ -0.51
CCDC144B-208ENST00000618081 SYT2Q8N9I0 419 aaPredicted RBP11.88□□□□□ -0.51
CCDC144B-208ENST00000618081 AP3B1O00203 1094 aa11.88□□□□□ -0.51
CCDC144B-208ENST00000618081 PER1O15534 1290 aaPredicted RBP11.88□□□□□ -0.51
CCDC144B-208ENST00000618081 SNRNP48Q6IEG0 339 aaKnown RBP11.88□□□□□ -0.51
CCDC144B-208ENST00000618081 CLEC4GQ6UXB4 293 aa11.88□□□□□ -0.51
CCDC144B-208ENST00000618081 MB21D1Q8N884 522 aa11.88□□□□□ -0.51
CCDC144B-208ENST00000618081 SEC31BQ9NQW1 1179 aa11.88□□□□□ -0.51
CCDC144B-208ENST00000618081 NDFIP2Q9NV92 336 aa11.88□□□□□ -0.51
CCDC144B-208ENST00000618081 E9PMD0 336 aa11.87□□□□□ -0.51
CCDC144B-208ENST00000618081 DCAF4L1Q3SXM0 396 aa11.87□□□□□ -0.51
CCDC144B-208ENST00000618081 C16orf87Q6PH81 154 aa11.87□□□□□ -0.51
CCDC144B-208ENST00000618081 PASD1Q8IV76 773 aa11.87□□□□□ -0.51
CCDC144B-208ENST00000618081 NSUN7Q8NE18 718 aaKnown RBP11.87□□□□□ -0.51
CCDC144B-208ENST00000618081 TDRD7Q8NHU6 1098 aaKnown RBP11.87□□□□□ -0.51
CCDC144B-208ENST00000618081 TTC17Q96AE7 1141 aa11.87□□□□□ -0.51
CCDC144B-208ENST00000618081 DACH2Q96NX9 599 aa11.87□□□□□ -0.51
CCDC144B-208ENST00000618081 KIF2CQ99661 725 aa11.87□□□□□ -0.51
CCDC144B-208ENST00000618081 IP6K2Q9UHH9 426 aa11.87□□□□□ -0.51
CCDC144B-208ENST00000618081 GOLGA8MH3BSY2 632 aa11.87□□□□□ -0.51
CCDC144B-208ENST00000618081 KRT4P19013 534 aa11.87□□□□□ -0.51
CCDC144B-208ENST00000618081 GPC5P78333 572 aa11.87□□□□□ -0.51
CCDC144B-208ENST00000618081 CYP27A1Q02318 531 aa11.87□□□□□ -0.51
CCDC144B-208ENST00000618081 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.87□□□□□ -0.51
CCDC144B-208ENST00000618081 NPHP4O75161 1426 aaPredicted RBP11.87□□□□□ -0.51
CCDC144B-208ENST00000618081 USP17L5A8MUK1 530 aa11.87□□□□□ -0.51
CCDC144B-208ENST00000618081 KRT8P05787 483 aa11.87□□□□□ -0.51
CCDC144B-208ENST00000618081 FAM83BQ5T0W9 1011 aa11.87□□□□□ -0.51
CCDC144B-208ENST00000618081 UNC13DQ70J99 1090 aa11.87□□□□□ -0.51
CCDC144B-208ENST00000618081 PAGE5Q96GU1 130 aa11.87□□□□□ -0.51
CCDC144B-208ENST00000618081 PUS3Q9BZE2 481 aaKnown RBP11.87□□□□□ -0.51
CCDC144B-208ENST00000618081 YY1AP1Q9H869 796 aa11.87□□□□□ -0.51
CCDC144B-208ENST00000618081 PCDHA6Q9UN73 950 aa11.87□□□□□ -0.51
CCDC144B-208ENST00000618081 ZBTB1Q9Y2K1 713 aa11.87□□□□□ -0.51
CCDC144B-208ENST00000618081 PCDHA8Q9Y5H6 950 aa11.87□□□□□ -0.51
CCDC144B-208ENST00000618081 AATKQ6ZMQ8 1374 aa11.87□□□□□ -0.51
CCDC144B-208ENST00000618081 TRAPPC3O43617 180 aa11.87□□□□□ -0.51
CCDC144B-208ENST00000618081 SDC4P31431 198 aa11.87□□□□□ -0.51
CCDC144B-208ENST00000618081 CRKP46108 304 aa11.87□□□□□ -0.51
CCDC144B-208ENST00000618081 NME3Q13232 169 aa11.87□□□□□ -0.51
CCDC144B-208ENST00000618081 GTF2H3Q13889 308 aa11.87□□□□□ -0.51
CCDC144B-208ENST00000618081 EMBQ6PCB8 327 aa11.87□□□□□ -0.51
CCDC144B-208ENST00000618081 SPATA33Q96N06 139 aa11.87□□□□□ -0.51
CCDC144B-208ENST00000618081 MYCBPQ99417 103 aaPredicted RBP11.87□□□□□ -0.51
CCDC144B-208ENST00000618081 NCAPD2Q15021 1401 aa11.87□□□□□ -0.51
CCDC144B-208ENST00000618081 ZSCAN9O15535 394 aaPredicted RBP11.87□□□□□ -0.51
CCDC144B-208ENST00000618081 OPTNQ96CV9 577 aa11.87□□□□□ -0.51
CCDC144B-208ENST00000618081 CEP72Q9P209 647 aa11.87□□□□□ -0.51
CCDC144B-208ENST00000618081 HSPA1AP0DMV8 641 aaKnown RBP11.87□□□□□ -0.51
CCDC144B-208ENST00000618081 HSPA1BP0DMV9 641 aaKnown RBP11.87□□□□□ -0.51
CCDC144B-208ENST00000618081 GNA15P30679 374 aa11.87□□□□□ -0.51
CCDC144B-208ENST00000618081 KCNJ6P48051 423 aa11.87□□□□□ -0.51
CCDC144B-208ENST00000618081 G3BP2Q9UN86 482 aaKnown RBP11.87□□□□□ -0.51
CCDC144B-208ENST00000618081 CDK12Q9NYV4 1490 aaPredicted RBP11.87□□□□□ -0.51
CCDC144B-208ENST00000618081 ABCB11O95342 1321 aa11.87□□□□□ -0.51
CCDC144B-208ENST00000618081 CYBBP04839 570 aa11.87□□□□□ -0.51
CCDC144B-208ENST00000618081 SLC7A5Q01650 507 aa11.87□□□□□ -0.51
CCDC144B-208ENST00000618081 PRKCQQ04759 706 aa11.87□□□□□ -0.51
CCDC144B-208ENST00000618081 TBC1D1Q86TI0 1168 aaPredicted RBP11.87□□□□□ -0.51
CCDC144B-208ENST00000618081 ZMAT2Q96NC0 199 aaKnown RBP11.87□□□□□ -0.51
CCDC144B-208ENST00000618081 MMP10P09238 476 aa11.86□□□□□ -0.51
CCDC144B-208ENST00000618081 ATICP31939 592 aa11.86□□□□□ -0.51
CCDC144B-208ENST00000618081 HDAC4P56524 1084 aa11.86□□□□□ -0.51
CCDC144B-208ENST00000618081 ROR1Q01973 937 aa11.86□□□□□ -0.51
CCDC144B-208ENST00000618081 ALKBH5Q6P6C2 394 aaKnown RBP11.86□□□□□ -0.51
CCDC144B-208ENST00000618081 SPTLC3Q9NUV7 552 aa11.86□□□□□ -0.51
CCDC144B-208ENST00000618081 PPARGC1AQ9UBK2 798 aaKnown RBP11.86□□□□□ -0.51
CCDC144B-208ENST00000618081 FRMD3A2A2Y4 597 aa11.86□□□□□ -0.51
CCDC144B-208ENST00000618081 TADA3O75528 432 aa11.86□□□□□ -0.51
CCDC144B-208ENST00000618081 POU5F1BQ06416 359 aa11.86□□□□□ -0.51
CCDC144B-208ENST00000618081 ENOSF1Q7L5Y1 443 aa11.86□□□□□ -0.51
CCDC144B-208ENST00000618081 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.86□□□□□ -0.51
CCDC144B-208ENST00000618081 MTIF3Q9H2K0 278 aaKnown RBP11.86□□□□□ -0.51
CCDC144B-208ENST00000618081 PALLDQ8WX93 1383 aa11.86□□□□□ -0.51
CCDC144B-208ENST00000618081 A0A0G2JND7 137 aa11.86□□□□□ -0.51
CCDC144B-208ENST00000618081 CDC42EP1Q00587 391 aa11.86□□□□□ -0.51
CCDC144B-208ENST00000618081 AARS2Q5JTZ9 985 aaKnown RBP11.86□□□□□ -0.51
CCDC144B-208ENST00000618081 THNSL1Q8IYQ7 743 aa11.86□□□□□ -0.51
CCDC144B-208ENST00000618081 TMEM94Q12767 1356 aa11.86□□□□□ -0.51
CCDC144B-208ENST00000618081 ARHGEF9O43307 516 aa11.86□□□□□ -0.51
CCDC144B-208ENST00000618081 RAET1EQ8TD07 263 aa11.86□□□□□ -0.51
CCDC144B-208ENST00000618081 NUP85Q9BW27 656 aa11.86□□□□□ -0.51
CCDC144B-208ENST00000618081 SMYD3Q9H7B4 428 aa11.86□□□□□ -0.51
CCDC144B-208ENST00000618081 NR3C1P04150 777 aa11.86□□□□□ -0.51
CCDC144B-208ENST00000618081 AP2B1P63010 937 aa11.86□□□□□ -0.51
CCDC144B-208ENST00000618081 DYNLL2Q96FJ2 89 aa11.86□□□□□ -0.51
CCDC144B-208ENST00000618081 CNOT8Q9UFF9 292 aaKnown RBP11.86□□□□□ -0.51
CCDC144B-208ENST00000618081 ARHGAP26Q9UNA1 814 aa11.86□□□□□ -0.51
CCDC144B-208ENST00000618081 ATF5Q9Y2D1 282 aaPredicted RBP11.86□□□□□ -0.51
CCDC144B-208ENST00000618081 ZNF197O14709 1029 aa11.86□□□□□ -0.51
CCDC144B-208ENST00000618081 KIF23Q02241 960 aaPredicted RBP11.86□□□□□ -0.51
CCDC144B-208ENST00000618081 ZNF235Q14590 738 aa11.86□□□□□ -0.51
CCDC144B-208ENST00000618081 KRT72Q14CN4 511 aa11.86□□□□□ -0.51
CCDC144B-208ENST00000618081 ZNF589Q86UQ0 364 aaPredicted RBP11.86□□□□□ -0.51
CCDC144B-208ENST00000618081 GRAMD1CQ8IYS0 662 aa11.86□□□□□ -0.51
CCDC144B-208ENST00000618081 DFFAO00273 331 aa11.85□□□□□ -0.51
CCDC144B-208ENST00000618081 DIAPH2O60879 1101 aa11.85□□□□□ -0.51
CCDC144B-208ENST00000618081 FAM20AQ96MK3 541 aa11.85□□□□□ -0.51
CCDC144B-208ENST00000618081 HSD17B4P51659 736 aa11.85□□□□□ -0.51
CCDC144B-208ENST00000618081 LAMB3Q13751 1172 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms