RNA–Protein interactions for RNA: ENST00000617641.4

PCDHGC3-205, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGC3, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-205ENST00000617641 FAM228BP0C875 321 aa18.9■□□□□ 0.62
PCDHGC3-205ENST00000617641 POLGP54098 1239 aaPredicted RBP18.9■□□□□ 0.62
PCDHGC3-205ENST00000617641 SNRPFP62306 86 aaKnown RBP18.9■□□□□ 0.62
PCDHGC3-205ENST00000617641 ERVK-9P63128 1117 aa18.9■□□□□ 0.62
PCDHGC3-205ENST00000617641 PTK2Q05397 1052 aa18.9■□□□□ 0.62
PCDHGC3-205ENST00000617641 NEDD9Q14511 834 aa18.9■□□□□ 0.62
PCDHGC3-205ENST00000617641 PLEKHO2Q8TD55 490 aa18.9■□□□□ 0.62
PCDHGC3-205ENST00000617641 HDAC6Q9UBN7 1215 aa18.9■□□□□ 0.62
PCDHGC3-205ENST00000617641 ADAMTS1Q9UHI8 967 aa18.9■□□□□ 0.62
PCDHGC3-205ENST00000617641 PUF60Q9UHX1 559 aaKnown RBP18.9■□□□□ 0.62
PCDHGC3-205ENST00000617641 EMSYQ7Z589 1322 aa18.9■□□□□ 0.62
PCDHGC3-205ENST00000617641 DNAJC25-GNG10A0A024R161 153 aa18.89■□□□□ 0.61
PCDHGC3-205ENST00000617641 ARIH2O95376 493 aa18.89■□□□□ 0.61
PCDHGC3-205ENST00000617641 ADRB2P07550 413 aa18.89■□□□□ 0.61
PCDHGC3-205ENST00000617641 CNGA1P29973 690 aa18.89■□□□□ 0.61
PCDHGC3-205ENST00000617641 TUBB2AQ13885 445 aa18.89■□□□□ 0.61
PCDHGC3-205ENST00000617641 SLC18A3Q16572 532 aa18.89■□□□□ 0.61
PCDHGC3-205ENST00000617641 MTERF4Q7Z6M4 381 aaKnown RBP18.89■□□□□ 0.61
PCDHGC3-205ENST00000617641 ANKRD13CQ8N6S4 541 aa18.89■□□□□ 0.61
PCDHGC3-205ENST00000617641 TMEM143Q96AN5 459 aa18.89■□□□□ 0.61
PCDHGC3-205ENST00000617641 TUBB2BQ9BVA1 445 aa18.89■□□□□ 0.61
PCDHGC3-205ENST00000617641 PJA2O43164 708 aa18.89■□□□□ 0.61
PCDHGC3-205ENST00000617641 MOCS3O95396 460 aa18.89■□□□□ 0.61
PCDHGC3-205ENST00000617641 TGFB3P10600 412 aa18.89■□□□□ 0.61
PCDHGC3-205ENST00000617641 RTP1P59025 263 aa18.89■□□□□ 0.61
PCDHGC3-205ENST00000617641 PPP3CAQ08209 521 aa18.89■□□□□ 0.61
PCDHGC3-205ENST00000617641 MKRN3Q13064 507 aaKnown RBP18.89■□□□□ 0.61
PCDHGC3-205ENST00000617641 C1orf220Q5T0J3 134 aa18.89■□□□□ 0.61
PCDHGC3-205ENST00000617641 SLC39A4Q6P5W5 647 aa18.89■□□□□ 0.61
PCDHGC3-205ENST00000617641 ZNF571Q7Z3V5 609 aaPredicted RBP18.89■□□□□ 0.61
PCDHGC3-205ENST00000617641 SAAL1Q96ER3 474 aa18.89■□□□□ 0.61
PCDHGC3-205ENST00000617641 IFT74Q96LB3 600 aa18.89■□□□□ 0.61
PCDHGC3-205ENST00000617641 PORCNQ9H237 461 aa18.89■□□□□ 0.61
PCDHGC3-205ENST00000617641 SALL4Q9UJQ4 1053 aa18.89■□□□□ 0.61
PCDHGC3-205ENST00000617641 CAPN6Q9Y6Q1 641 aa18.89■□□□□ 0.61
PCDHGC3-205ENST00000617641 TEX35Q5T0J7 233 aa18.88■□□□□ 0.61
PCDHGC3-205ENST00000617641 TAS1R3Q7RTX0 852 aa18.88■□□□□ 0.61
PCDHGC3-205ENST00000617641 SRGAP1Q7Z6B7 1085 aa18.88■□□□□ 0.61
PCDHGC3-205ENST00000617641 CBWD2Q8IUF1 395 aa18.88■□□□□ 0.61
PCDHGC3-205ENST00000617641 MAP7D2Q96T17 732 aa18.88■□□□□ 0.61
PCDHGC3-205ENST00000617641 DNAJC12Q9UKB3 198 aa18.88■□□□□ 0.61
PCDHGC3-205ENST00000617641 TCF7P36402 384 aaPredicted RBP18.88■□□□□ 0.61
PCDHGC3-205ENST00000617641 GCLMP48507 274 aa18.88■□□□□ 0.61
PCDHGC3-205ENST00000617641 METTL7BQ6UX53 244 aa18.88■□□□□ 0.61
PCDHGC3-205ENST00000617641 RSRC2Q7L4I2 434 aaKnown RBP18.88■□□□□ 0.61
PCDHGC3-205ENST00000617641 TRAPPC11Q7Z392 1133 aa18.88■□□□□ 0.61
PCDHGC3-205ENST00000617641 MPHOSPH6Q99547 160 aaKnown RBP18.88■□□□□ 0.61
PCDHGC3-205ENST00000617641 MROH8Q9H579 483 aa18.88■□□□□ 0.61
PCDHGC3-205ENST00000617641 DHX33Q9H6R0 707 aaKnown RBP18.88■□□□□ 0.61
PCDHGC3-205ENST00000617641 EFCC1Q9HA90 598 aa18.88■□□□□ 0.61
PCDHGC3-205ENST00000617641 TULP1O00294 542 aaPredicted RBP18.87■□□□□ 0.61
PCDHGC3-205ENST00000617641 MAPK13O15264 365 aa18.87■□□□□ 0.61
PCDHGC3-205ENST00000617641 GRIN3BO60391 1043 aa18.87■□□□□ 0.61
PCDHGC3-205ENST00000617641 SNRNP35Q16560 246 aaKnown RBP18.87■□□□□ 0.61
PCDHGC3-205ENST00000617641 FBXO38Q6PIJ6 1188 aa18.87■□□□□ 0.61
PCDHGC3-205ENST00000617641 FBXO16Q8IX29 292 aaPredicted RBP18.87■□□□□ 0.61
PCDHGC3-205ENST00000617641 LMO3Q8TAP4 145 aa18.87■□□□□ 0.61
PCDHGC3-205ENST00000617641 CEP89Q96ST8 783 aa18.87■□□□□ 0.61
PCDHGC3-205ENST00000617641 NIFKQ9BYG3 293 aaKnown RBP18.87■□□□□ 0.61
PCDHGC3-205ENST00000617641 EPC1Q9H2F5 836 aa18.87■□□□□ 0.61
PCDHGC3-205ENST00000617641 ARHGAP28Q9P2N2 729 aa18.87■□□□□ 0.61
PCDHGC3-205ENST00000617641 DDX41Q9UJV9 622 aaKnown RBP18.87■□□□□ 0.61
PCDHGC3-205ENST00000617641 MCM3APO60318 1980 aa18.87■□□□□ 0.61
PCDHGC3-205ENST00000617641 ZNFX1Q9P2E3 1918 aaKnown RBP18.87■□□□□ 0.61
PCDHGC3-205ENST00000617641 TACC1O75410 805 aa18.86■□□□□ 0.61
PCDHGC3-205ENST00000617641 GFPT2O94808 682 aa18.86■□□□□ 0.61
PCDHGC3-205ENST00000617641 PRKCIP41743 596 aa18.86■□□□□ 0.61
PCDHGC3-205ENST00000617641 STAT5BP51692 787 aa18.86■□□□□ 0.61
PCDHGC3-205ENST00000617641 CHMP4BP1P59074 171 aa18.86■□□□□ 0.61
PCDHGC3-205ENST00000617641 PDE4CQ08493 712 aa18.86■□□□□ 0.61
PCDHGC3-205ENST00000617641 DRAP1Q14919 205 aaPredicted RBP18.86■□□□□ 0.61
PCDHGC3-205ENST00000617641 WHAMMP3Q1A5X7 153 aa18.86■□□□□ 0.61
PCDHGC3-205ENST00000617641 CEP112Q8N8E3 955 aa18.86■□□□□ 0.61
PCDHGC3-205ENST00000617641 ASAP3Q8TDY4 903 aa18.86■□□□□ 0.61
PCDHGC3-205ENST00000617641 SEPT1Q8WYJ6 367 aa18.86■□□□□ 0.61
PCDHGC3-205ENST00000617641 APEX2Q9UBZ4 518 aa18.86■□□□□ 0.61
PCDHGC3-205ENST00000617641 BZW2Q9Y6E2 419 aaKnown RBP18.86■□□□□ 0.61
PCDHGC3-205ENST00000617641 F8VZ95 297 aa18.86■□□□□ 0.61
PCDHGC3-205ENST00000617641 HNRNPDLO14979 420 aaKnown RBP18.86■□□□□ 0.61
PCDHGC3-205ENST00000617641 LRRN2O75325 713 aa18.86■□□□□ 0.61
PCDHGC3-205ENST00000617641 STAT1P42224 750 aa18.86■□□□□ 0.61
PCDHGC3-205ENST00000617641 HSP90AA2PQ14568 343 aaPredicted RBP18.86■□□□□ 0.61
PCDHGC3-205ENST00000617641 FAM160B1Q5W0V3 765 aa18.86■□□□□ 0.61
PCDHGC3-205ENST00000617641 PAPD7Q5XG87 772 aaKnown RBP18.86■□□□□ 0.61
PCDHGC3-205ENST00000617641 TRIM58Q8NG06 486 aa18.86■□□□□ 0.61
PCDHGC3-205ENST00000617641 POMGNT1Q8WZA1 660 aa18.86■□□□□ 0.61
PCDHGC3-205ENST00000617641 PACSIN1Q9BY11 444 aa18.86■□□□□ 0.61
PCDHGC3-205ENST00000617641 STK33Q9BYT3 514 aa18.86■□□□□ 0.61
PCDHGC3-205ENST00000617641 PNMA3Q9UL41 463 aa18.86■□□□□ 0.61
PCDHGC3-205ENST00000617641 RRP9O43818 475 aaKnown RBP18.85■□□□□ 0.61
PCDHGC3-205ENST00000617641 SRGAP2O75044 1071 aa18.85■□□□□ 0.61
PCDHGC3-205ENST00000617641 PHLDB3Q6NSJ2 640 aa18.85■□□□□ 0.61
PCDHGC3-205ENST00000617641 TXLNBQ8N3L3 684 aa18.85■□□□□ 0.61
PCDHGC3-205ENST00000617641 SLC7A3Q8WY07 619 aa18.85■□□□□ 0.61
PCDHGC3-205ENST00000617641 GOLGA1Q92805 767 aa18.85■□□□□ 0.61
PCDHGC3-205ENST00000617641 BICD1Q96G01 975 aa18.85■□□□□ 0.61
PCDHGC3-205ENST00000617641 ARID3AQ99856 593 aa18.85■□□□□ 0.61
PCDHGC3-205ENST00000617641 PDHXO00330 501 aa18.85■□□□□ 0.61
PCDHGC3-205ENST00000617641 BUB1O43683 1085 aa18.85■□□□□ 0.61
PCDHGC3-205ENST00000617641 N4BP1O75113 896 aaKnown RBP18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms