RNA–Protein interactions for RNA: ENST00000617596.4

SNAP47-213, Transcript of synaptosome associated protein 47, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SNAP47, Length 1,905 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAP47-213ENST00000617596 CLIC2O15247 247 aa17.87■□□□□ 0.45
SNAP47-213ENST00000617596 EIF3DO15371 548 aaKnown RBP eCLIP17.87■□□□□ 0.45
SNAP47-213ENST00000617596 KPNA6O60684 536 aa17.87■□□□□ 0.45
SNAP47-213ENST00000617596 PPP1R2P41236 205 aa17.87■□□□□ 0.45
SNAP47-213ENST00000617596 GTF2BQ00403 316 aa17.87■□□□□ 0.45
SNAP47-213ENST00000617596 TMEM62Q0P6H9 643 aa17.87■□□□□ 0.45
SNAP47-213ENST00000617596 BMT2Q1RMZ1 405 aa17.87■□□□□ 0.45
SNAP47-213ENST00000617596 ZCWPW2Q504Y3 356 aa17.87■□□□□ 0.45
SNAP47-213ENST00000617596 FAM47CQ5HY64 1035 aa17.87■□□□□ 0.45
SNAP47-213ENST00000617596 RUFY4Q6ZNE9 571 aa17.87■□□□□ 0.45
SNAP47-213ENST00000617596 CTU1Q7Z7A3 348 aaKnown RBP17.87■□□□□ 0.45
SNAP47-213ENST00000617596 LINC01465Q8N7H1 131 aa17.87■□□□□ 0.45
SNAP47-213ENST00000617596 RNF149Q8NC42 400 aa17.87■□□□□ 0.45
SNAP47-213ENST00000617596 TCP11Q8WWU5 503 aa17.87■□□□□ 0.45
SNAP47-213ENST00000617596 VTI1AQ96AJ9 217 aa17.87■□□□□ 0.45
SNAP47-213ENST00000617596 FAM49AQ9H0Q0 323 aaPredicted RBP17.87■□□□□ 0.45
SNAP47-213ENST00000617596 RNF208Q9H0X6 261 aa17.87■□□□□ 0.45
SNAP47-213ENST00000617596 AKT3Q9Y243 479 aa17.87■□□□□ 0.45
SNAP47-213ENST00000617596 BICDL2A1A5D9 508 aa17.86■□□□□ 0.45
SNAP47-213ENST00000617596 MAGEB2O15479 319 aa17.86■□□□□ 0.45
SNAP47-213ENST00000617596 TGFB1I1O43294 461 aa17.86■□□□□ 0.45
SNAP47-213ENST00000617596 MSCO60682 206 aa17.86■□□□□ 0.45
SNAP47-213ENST00000617596 MAPTP10636 758 aaKnown RBP17.86■□□□□ 0.45
SNAP47-213ENST00000617596 CCL5P13501 91 aa17.86■□□□□ 0.45
SNAP47-213ENST00000617596 CST5P28325 142 aaPredicted RBP17.86■□□□□ 0.45
SNAP47-213ENST00000617596 NAMPTP43490 491 aa17.86■□□□□ 0.45
SNAP47-213ENST00000617596 TAS1R3Q7RTX0 852 aa17.86■□□□□ 0.45
SNAP47-213ENST00000617596 EXOC8Q8IYI6 725 aa17.86■□□□□ 0.45
SNAP47-213ENST00000617596 SYCP3Q8IZU3 236 aa17.86■□□□□ 0.45
SNAP47-213ENST00000617596 DEPTORQ8TB45 409 aa17.86■□□□□ 0.45
SNAP47-213ENST00000617596 JPH2Q9BR39 696 aaPredicted RBP17.86■□□□□ 0.45
SNAP47-213ENST00000617596 GRIN2DO15399 1336 aa17.86■□□□□ 0.45
SNAP47-213ENST00000617596 C17orf102A2RUQ5 167 aa17.86■□□□□ 0.45
SNAP47-213ENST00000617596 RRN3P2A6NIE6 340 aa17.86■□□□□ 0.45
SNAP47-213ENST00000617596 CSDE1O75534 798 aaKnown RBP17.86■□□□□ 0.45
SNAP47-213ENST00000617596 ZNF18P17022 549 aa17.86■□□□□ 0.45
SNAP47-213ENST00000617596 DNM2P50570 870 aa17.86■□□□□ 0.45
SNAP47-213ENST00000617596 ACLYP53396 1101 aa17.86■□□□□ 0.45
SNAP47-213ENST00000617596 KIAA0319LQ8IZA0 1049 aa17.86■□□□□ 0.45
SNAP47-213ENST00000617596 PCSK9Q8NBP7 692 aaKnown RBP17.86■□□□□ 0.45
SNAP47-213ENST00000617596 ARHGAP28Q9P2N2 729 aa17.86■□□□□ 0.45
SNAP47-213ENST00000617596 TBX20Q9UMR3 447 aa17.86■□□□□ 0.45
SNAP47-213ENST00000617596 GAS2O43903 313 aaKnown RBP17.85■□□□□ 0.45
SNAP47-213ENST00000617596 CTCFP49711 727 aaPredicted RBP17.85■□□□□ 0.45
SNAP47-213ENST00000617596 ADAM17P78536 824 aa17.85■□□□□ 0.45
SNAP47-213ENST00000617596 SLC20A2Q08357 652 aa17.85■□□□□ 0.45
SNAP47-213ENST00000617596 STXBP4Q6ZWJ1 553 aa17.85■□□□□ 0.45
SNAP47-213ENST00000617596 IRF2BP1Q8IU81 584 aa17.85■□□□□ 0.45
SNAP47-213ENST00000617596 TSG101Q99816 390 aa17.85■□□□□ 0.45
SNAP47-213ENST00000617596 ST6GALNAC4Q9H4F1 302 aa17.85■□□□□ 0.45
SNAP47-213ENST00000617596 PAK6Q9NQU5 681 aaPredicted RBP17.85■□□□□ 0.45
SNAP47-213ENST00000617596 CGNQ9P2M7 1197 aaKnown RBP17.85■□□□□ 0.45
SNAP47-213ENST00000617596 EVPLQ92817 2033 aa17.84■□□□□ 0.45
SNAP47-213ENST00000617596 RIOK3O14730 519 aaKnown RBP17.84■□□□□ 0.45
SNAP47-213ENST00000617596 EDN1P05305 212 aa17.84■□□□□ 0.45
SNAP47-213ENST00000617596 CYP2C9P11712 490 aa17.84■□□□□ 0.45
SNAP47-213ENST00000617596 CDK11BP21127 795 aaKnown RBP17.84■□□□□ 0.45
SNAP47-213ENST00000617596 TMOD1P28289 359 aa17.84■□□□□ 0.45
SNAP47-213ENST00000617596 TPM4P67936 248 aa17.84■□□□□ 0.45
SNAP47-213ENST00000617596 LRRC63Q05C16 580 aa17.84■□□□□ 0.45
SNAP47-213ENST00000617596 MXD4Q14582 209 aaPredicted RBP17.84■□□□□ 0.45
SNAP47-213ENST00000617596 PPP2R5AQ15172 486 aa17.84■□□□□ 0.45
SNAP47-213ENST00000617596 GDF6Q6KF10 455 aaPredicted RBP17.84■□□□□ 0.45
SNAP47-213ENST00000617596 ACCSQ96QU6 501 aa17.84■□□□□ 0.45
SNAP47-213ENST00000617596 ARID3AQ99856 593 aa17.84■□□□□ 0.45
SNAP47-213ENST00000617596 GINS2Q9Y248 185 aa17.84■□□□□ 0.45
SNAP47-213ENST00000617596 MKI67P46013 3256 aaKnown RBP17.84■□□□□ 0.45
SNAP47-213ENST00000617596 MBLAC1A4D2B0 266 aaPredicted RBP17.84■□□□□ 0.45
SNAP47-213ENST00000617596 PTPN21Q16825 1174 aa17.84■□□□□ 0.45
SNAP47-213ENST00000617596 CDKAL1Q5VV42 579 aa17.84■□□□□ 0.45
SNAP47-213ENST00000617596 LRRC55Q6ZSA7 311 aa17.84■□□□□ 0.45
SNAP47-213ENST00000617596 DNAJB3Q8WWF6 145 aa17.84■□□□□ 0.45
SNAP47-213ENST00000617596 GBP3Q9H0R5 595 aa17.84■□□□□ 0.45
SNAP47-213ENST00000617596 TYW1Q9NV66 732 aaKnown RBP17.84■□□□□ 0.45
SNAP47-213ENST00000617596 GTF2IRD1Q9UHL9 959 aa17.84■□□□□ 0.45
SNAP47-213ENST00000617596 TRAF3IP3Q9Y228 551 aa17.84■□□□□ 0.45
SNAP47-213ENST00000617596 A0A087WZ62 844 aa17.83■□□□□ 0.44
SNAP47-213ENST00000617596 TTLL13PA6NNM8 815 aa17.83■□□□□ 0.44
SNAP47-213ENST00000617596 ANKRD63C9JTQ0 380 aa17.83■□□□□ 0.44
SNAP47-213ENST00000617596 PDXKO00764 312 aa17.83■□□□□ 0.44
SNAP47-213ENST00000617596 ADAM9Q13443 819 aa17.83■□□□□ 0.44
SNAP47-213ENST00000617596 KIZQ2M2Z5 673 aa17.83■□□□□ 0.44
SNAP47-213ENST00000617596 MAP4K3Q8IVH8 894 aa17.83■□□□□ 0.44
SNAP47-213ENST00000617596 FDXACB1Q9BRP7 624 aaPredicted RBP17.83■□□□□ 0.44
SNAP47-213ENST00000617596 MINDY3Q9H8M7 445 aa17.83■□□□□ 0.44
SNAP47-213ENST00000617596 AGPAT3Q9NRZ7 376 aa17.83■□□□□ 0.44
SNAP47-213ENST00000617596 CCDC66A2RUB6 948 aa17.82■□□□□ 0.44
SNAP47-213ENST00000617596 K7ERI5 159 aa17.82■□□□□ 0.44
SNAP47-213ENST00000617596 NR2F2P24468 414 aa17.82■□□□□ 0.44
SNAP47-213ENST00000617596 HOXC8P31273 242 aa17.82■□□□□ 0.44
SNAP47-213ENST00000617596 NLRP11P59045 1033 aaKnown RBP17.82■□□□□ 0.44
SNAP47-213ENST00000617596 ITGA7Q13683 1181 aa17.82■□□□□ 0.44
SNAP47-213ENST00000617596 ALCAMQ13740 583 aa17.82■□□□□ 0.44
SNAP47-213ENST00000617596 FBXO46Q6PJ61 603 aaPredicted RBP17.82■□□□□ 0.44
SNAP47-213ENST00000617596 ZSWIM2Q8NEG5 633 aa17.82■□□□□ 0.44
SNAP47-213ENST00000617596 TRIM5Q9C035 493 aa17.82■□□□□ 0.44
SNAP47-213ENST00000617596 PCIF1Q9H4Z3 704 aa17.82■□□□□ 0.44
SNAP47-213ENST00000617596 IFT122Q9HBG6 1241 aa17.82■□□□□ 0.44
SNAP47-213ENST00000617596 SCN10AQ9Y5Y9 1956 aa17.82■□□□□ 0.44
SNAP47-213ENST00000617596 UBE4BO95155 1302 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms