RNA–Protein interactions for RNA: ENST00000617310.4

SMARCA1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

TSL 2

Gene SMARCA1, Length 4,291 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-205ENST00000617310 URGCPQ8TCY9 931 aa10.89□□□□□ -0.67
SMARCA1-205ENST00000617310 TRPM4Q8TD43 1214 aa10.89□□□□□ -0.67
SMARCA1-205ENST00000617310 PDCD6IPQ8WUM4 868 aaKnown RBP10.89□□□□□ -0.67
SMARCA1-205ENST00000617310 DPF2Q92785 391 aa10.89□□□□□ -0.67
SMARCA1-205ENST00000617310 RNF25Q96BH1 459 aaPredicted RBP10.89□□□□□ -0.67
SMARCA1-205ENST00000617310 MOV10L1Q9BXT6 1211 aaKnown RBP10.89□□□□□ -0.67
SMARCA1-205ENST00000617310 CCDC68Q9H2F9 335 aa10.89□□□□□ -0.67
SMARCA1-205ENST00000617310 KIAA1586Q9HCI6 787 aa10.89□□□□□ -0.67
SMARCA1-205ENST00000617310 ERAP1Q9NZ08 941 aa10.89□□□□□ -0.67
SMARCA1-205ENST00000617310 NDUFAB1O14561 156 aa10.88□□□□□ -0.67
SMARCA1-205ENST00000617310 RGS16O15492 202 aaPredicted RBP10.88□□□□□ -0.67
SMARCA1-205ENST00000617310 FMR1Q06787 632 aaKnown RBP eCLIP10.88□□□□□ -0.67
SMARCA1-205ENST00000617310 ZNF211Q13398 564 aaPredicted RBP10.88□□□□□ -0.67
SMARCA1-205ENST00000617310 WHAMMP3Q1A5X7 153 aa10.88□□□□□ -0.67
SMARCA1-205ENST00000617310 DARS2Q6PI48 645 aaKnown RBP10.88□□□□□ -0.67
SMARCA1-205ENST00000617310 PLEKHH3Q7Z736 793 aa10.88□□□□□ -0.67
SMARCA1-205ENST00000617310 SPATC1LQ9H0A9 340 aa10.88□□□□□ -0.67
SMARCA1-205ENST00000617310 ALDH8A1Q9H2A2 487 aaPredicted RBP10.88□□□□□ -0.67
SMARCA1-205ENST00000617310 TCRBV5S4A2TA0A5A2 114 aa10.88□□□□□ -0.67
SMARCA1-205ENST00000617310 ABCD1P33897 745 aa10.88□□□□□ -0.67
SMARCA1-205ENST00000617310 RGS7P49802 495 aa10.88□□□□□ -0.67
SMARCA1-205ENST00000617310 FCGRTP55899 365 aa10.88□□□□□ -0.67
SMARCA1-205ENST00000617310 SOX10P56693 466 aa10.88□□□□□ -0.67
SMARCA1-205ENST00000617310 SEC23AQ15436 765 aa10.88□□□□□ -0.67
SMARCA1-205ENST00000617310 ANKS4BQ8N8V4 417 aa10.88□□□□□ -0.67
SMARCA1-205ENST00000617310 FBXL13Q8NEE6 735 aa10.88□□□□□ -0.67
SMARCA1-205ENST00000617310 GCNAQ96QF7 691 aa10.88□□□□□ -0.67
SMARCA1-205ENST00000617310 TUFT1Q9NNX1 390 aa10.88□□□□□ -0.67
SMARCA1-205ENST00000617310 ABCF3Q9NUQ8 709 aa10.88□□□□□ -0.67
SMARCA1-205ENST00000617310 HSPBP1Q9NZL4 362 aa10.88□□□□□ -0.67
SMARCA1-205ENST00000617310 PFASO15067 1338 aa10.88□□□□□ -0.67
SMARCA1-205ENST00000617310 PDS5AQ29RF7 1337 aaKnown RBP10.88□□□□□ -0.67
SMARCA1-205ENST00000617310 C2CD2LO14523 706 aa10.88□□□□□ -0.67
SMARCA1-205ENST00000617310 GNA15P30679 374 aa10.88□□□□□ -0.67
SMARCA1-205ENST00000617310 KCNJ6P48051 423 aa10.88□□□□□ -0.67
SMARCA1-205ENST00000617310 EPHB1P54762 984 aa10.88□□□□□ -0.67
SMARCA1-205ENST00000617310 TUBB2AQ13885 445 aa10.88□□□□□ -0.67
SMARCA1-205ENST00000617310 SEPT6Q14141 434 aa10.88□□□□□ -0.67
SMARCA1-205ENST00000617310 TKFCQ3LXA3 575 aa10.88□□□□□ -0.67
SMARCA1-205ENST00000617310 KCTD16Q68DU8 428 aa10.88□□□□□ -0.67
SMARCA1-205ENST00000617310 FAM83AQ86UY5 434 aa10.88□□□□□ -0.67
SMARCA1-205ENST00000617310 GDAP1Q8TB36 358 aa10.88□□□□□ -0.67
SMARCA1-205ENST00000617310 SPON2Q9BUD6 331 aa10.88□□□□□ -0.67
SMARCA1-205ENST00000617310 TUBB2BQ9BVA1 445 aa10.88□□□□□ -0.67
SMARCA1-205ENST00000617310 INTS2Q9H0H0 1204 aaKnown RBP10.88□□□□□ -0.67
SMARCA1-205ENST00000617310 UBE4BO95155 1302 aa10.88□□□□□ -0.67
SMARCA1-205ENST00000617310 PITPNM2Q9BZ72 1349 aa10.88□□□□□ -0.67
SMARCA1-205ENST00000617310 SDK1Q7Z5N4 2213 aa10.88□□□□□ -0.67
SMARCA1-205ENST00000617310 EBAG9O00559 213 aa10.87□□□□□ -0.67
SMARCA1-205ENST00000617310 IRF6O14896 467 aa10.87□□□□□ -0.67
SMARCA1-205ENST00000617310 MCF2LO15068 1137 aa10.87□□□□□ -0.67
SMARCA1-205ENST00000617310 CYP26A1O43174 497 aa10.87□□□□□ -0.67
SMARCA1-205ENST00000617310 CREB3O43889 395 aa10.87□□□□□ -0.67
SMARCA1-205ENST00000617310 HEXIM1O94992 359 aaKnown RBP10.87□□□□□ -0.67
SMARCA1-205ENST00000617310 TM4SF1P30408 202 aa10.87□□□□□ -0.67
SMARCA1-205ENST00000617310 THPOP40225 353 aa10.87□□□□□ -0.67
SMARCA1-205ENST00000617310 PSMC1P62191 440 aaKnown RBP10.87□□□□□ -0.67
SMARCA1-205ENST00000617310 SLC7A5Q01650 507 aa10.87□□□□□ -0.67
SMARCA1-205ENST00000617310 C2orf54Q08AI8 447 aa10.87□□□□□ -0.67
SMARCA1-205ENST00000617310 NME3Q13232 169 aa10.87□□□□□ -0.67
SMARCA1-205ENST00000617310 LGSNQ5TDP6 509 aa10.87□□□□□ -0.67
SMARCA1-205ENST00000617310 TRIM11Q96F44 468 aa10.87□□□□□ -0.67
SMARCA1-205ENST00000617310 EPB41L5Q9HCM4 733 aa10.87□□□□□ -0.67
SMARCA1-205ENST00000617310 FAM49BQ9NUQ9 324 aa10.87□□□□□ -0.67
SMARCA1-205ENST00000617310 HAUS2Q9NVX0 235 aa10.87□□□□□ -0.67
SMARCA1-205ENST00000617310 CDC23Q9UJX2 597 aa10.87□□□□□ -0.67
SMARCA1-205ENST00000617310 USP20Q9Y2K6 914 aa10.87□□□□□ -0.67
SMARCA1-205ENST00000617310 COL3A1P02461 1466 aaPredicted RBP10.87□□□□□ -0.67
SMARCA1-205ENST00000617310 EFNA5P52803 228 aa10.87□□□□□ -0.67
SMARCA1-205ENST00000617310 VGLL4Q14135 290 aa10.87□□□□□ -0.67
SMARCA1-205ENST00000617310 BBS9Q3SYG4 887 aa10.87□□□□□ -0.67
SMARCA1-205ENST00000617310 EPC2Q52LR7 807 aa10.87□□□□□ -0.67
SMARCA1-205ENST00000617310 C10orf76Q5T2E6 689 aa10.87□□□□□ -0.67
SMARCA1-205ENST00000617310 PROM2Q8N271 834 aa10.87□□□□□ -0.67
SMARCA1-205ENST00000617310 VGLL2Q8N8G2 317 aa10.87□□□□□ -0.67
SMARCA1-205ENST00000617310 CEP63Q96MT8 703 aa10.87□□□□□ -0.67
SMARCA1-205ENST00000617310 PI4K2AQ9BTU6 479 aa10.87□□□□□ -0.67
SMARCA1-205ENST00000617310 GPRC5DQ9NZD1 345 aa10.87□□□□□ -0.67
SMARCA1-205ENST00000617310 PACSIN2Q9UNF0 486 aaPredicted RBP10.87□□□□□ -0.67
SMARCA1-205ENST00000617310 DAAM1Q9Y4D1 1078 aa10.87□□□□□ -0.67
SMARCA1-205ENST00000617310 SRGAP2O75044 1071 aa10.87□□□□□ -0.67
SMARCA1-205ENST00000617310 SLCO1A2P46721 670 aa10.87□□□□□ -0.67
SMARCA1-205ENST00000617310 NUMBP49757 651 aa10.87□□□□□ -0.67
SMARCA1-205ENST00000617310 DGKDQ16760 1214 aa10.87□□□□□ -0.67
SMARCA1-205ENST00000617310 RUFY4Q6ZNE9 571 aa10.87□□□□□ -0.67
SMARCA1-205ENST00000617310 BBS5Q8N3I7 341 aa10.87□□□□□ -0.67
SMARCA1-205ENST00000617310 LBHD1Q9BQE6 289 aaPredicted RBP10.87□□□□□ -0.67
SMARCA1-205ENST00000617310 SYT17Q9BSW7 474 aa10.87□□□□□ -0.67
SMARCA1-205ENST00000617310 FAM198AQ9UFP1 575 aa10.87□□□□□ -0.67
SMARCA1-205ENST00000617310 ARHGEF28Q8N1W1 1705 aaKnown RBP10.87□□□□□ -0.67
SMARCA1-205ENST00000617310 PASKQ96RG2 1323 aa10.87□□□□□ -0.67
SMARCA1-205ENST00000617310 TMEM150BA6NC51 233 aa10.87□□□□□ -0.67
SMARCA1-205ENST00000617310 PGRMC1O00264 195 aaKnown RBP10.87□□□□□ -0.67
SMARCA1-205ENST00000617310 RPA1P27694 616 aa10.87□□□□□ -0.67
SMARCA1-205ENST00000617310 PSMD6Q15008 389 aa10.87□□□□□ -0.67
SMARCA1-205ENST00000617310 CCDC144BQ3MJ40 725 aa10.87□□□□□ -0.67
SMARCA1-205ENST00000617310 FAM102AQ5T9C2 384 aaPredicted RBP10.87□□□□□ -0.67
SMARCA1-205ENST00000617310 TOGARAM2Q6ZUX3 1019 aa10.87□□□□□ -0.67
SMARCA1-205ENST00000617310 NOP9Q86U38 636 aaKnown RBP10.87□□□□□ -0.67
SMARCA1-205ENST00000617310 SYTL5Q8TDW5 730 aaPredicted RBP10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms