RNA–Protein interactions for RNA: ENST00000616825.4

ATXN2-227, Transcript of ataxin 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene ATXN2, Length 4,575 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN2-227ENST00000616825 ATP2C1P98194 919 aaPredicted RBP18.88■□□□□ 0.61
ATXN2-227ENST00000616825 SYT2Q8N9I0 419 aaPredicted RBP18.88■□□□□ 0.61
ATXN2-227ENST00000616825 GIPC2Q8TF65 315 aa18.88■□□□□ 0.61
ATXN2-227ENST00000616825 ELAC2Q9BQ52 826 aaKnown RBP18.88■□□□□ 0.61
ATXN2-227ENST00000616825 MRPL46Q9H2W6 279 aaKnown RBP18.88■□□□□ 0.61
ATXN2-227ENST00000616825 OLA1Q9NTK5 396 aaKnown RBP18.88■□□□□ 0.61
ATXN2-227ENST00000616825 RBAKQ9NYW8 714 aaPredicted RBP18.88■□□□□ 0.61
ATXN2-227ENST00000616825 ARHGAP31Q2M1Z3 1444 aa18.88■□□□□ 0.61
ATXN2-227ENST00000616825 NBPF26B4DH59 902 aa18.88■□□□□ 0.61
ATXN2-227ENST00000616825 GNA15P30679 374 aa18.88■□□□□ 0.61
ATXN2-227ENST00000616825 GFPT1Q06210 699 aaPredicted RBP18.88■□□□□ 0.61
ATXN2-227ENST00000616825 SCARF1Q14162 830 aa18.88■□□□□ 0.61
ATXN2-227ENST00000616825 ZNF746Q6NUN9 644 aaPredicted RBP18.88■□□□□ 0.61
ATXN2-227ENST00000616825 NBPF10Q6P3W6 841 aaKnown RBP18.88■□□□□ 0.61
ATXN2-227ENST00000616825 NBPF15Q8N660 670 aa18.88■□□□□ 0.61
ATXN2-227ENST00000616825 PDCD6IPQ8WUM4 868 aaKnown RBP18.88■□□□□ 0.61
ATXN2-227ENST00000616825 ALKBH8Q96BT7 664 aaKnown RBP18.88■□□□□ 0.61
ATXN2-227ENST00000616825 EIF2AK1Q9BQI3 630 aaKnown RBP18.88■□□□□ 0.61
ATXN2-227ENST00000616825 IRAK4Q9NWZ3 460 aa18.88■□□□□ 0.61
ATXN2-227ENST00000616825 RNF181Q9P0P0 153 aa18.88■□□□□ 0.61
ATXN2-227ENST00000616825 PPARGC1AQ9UBK2 798 aaKnown RBP18.88■□□□□ 0.61
ATXN2-227ENST00000616825 TTC7AQ9ULT0 858 aaPredicted RBP18.88■□□□□ 0.61
ATXN2-227ENST00000616825 M0QYV0 167 aa18.88■□□□□ 0.61
ATXN2-227ENST00000616825 TSGA10IPQ3SY00 556 aa18.88■□□□□ 0.61
ATXN2-227ENST00000616825 SAAL1Q96ER3 474 aa18.88■□□□□ 0.61
ATXN2-227ENST00000616825 KDM5CP41229 1560 aa18.88■□□□□ 0.61
ATXN2-227ENST00000616825 NNMTP40261 264 aa18.88■□□□□ 0.61
ATXN2-227ENST00000616825 SPATA33Q96N06 139 aa18.88■□□□□ 0.61
ATXN2-227ENST00000616825 POLR3FQ9H1D9 316 aaPredicted RBP18.88■□□□□ 0.61
ATXN2-227ENST00000616825 SLC9A2Q9UBY0 812 aa18.88■□□□□ 0.61
ATXN2-227ENST00000616825 AGO2Q9UKV8 859 aaKnown RBP18.88■□□□□ 0.61
ATXN2-227ENST00000616825 KCNQ2O43526 872 aa18.87■□□□□ 0.61
ATXN2-227ENST00000616825 EFNA5P52803 228 aa18.87■□□□□ 0.61
ATXN2-227ENST00000616825 TRAIPQ9BWF2 469 aa18.87■□□□□ 0.61
ATXN2-227ENST00000616825 GOLPH3LQ9H4A5 285 aa18.87■□□□□ 0.61
ATXN2-227ENST00000616825 KPNA7A9QM74 516 aa18.87■□□□□ 0.61
ATXN2-227ENST00000616825 SRGAP2O75044 1071 aa18.87■□□□□ 0.61
ATXN2-227ENST00000616825 APOEP02649 317 aa18.87■□□□□ 0.61
ATXN2-227ENST00000616825 RPSAP08865 295 aaKnown RBP18.87■□□□□ 0.61
ATXN2-227ENST00000616825 TRIM49P0CI25 452 aa18.87■□□□□ 0.61
ATXN2-227ENST00000616825 TRIM49CP0CI26 452 aa18.87■□□□□ 0.61
ATXN2-227ENST00000616825 PDIA5Q14554 519 aa18.87■□□□□ 0.61
ATXN2-227ENST00000616825 RHOT1Q8IXI2 618 aa18.87■□□□□ 0.61
ATXN2-227ENST00000616825 RNF217Q8TC41 542 aa18.87■□□□□ 0.61
ATXN2-227ENST00000616825 ZNF668Q96K58 619 aaPredicted RBP18.87■□□□□ 0.61
ATXN2-227ENST00000616825 INTS2Q9H0H0 1204 aaKnown RBP18.87■□□□□ 0.61
ATXN2-227ENST00000616825 ADGRG1Q9Y653 693 aa18.87■□□□□ 0.61
ATXN2-227ENST00000616825 DCTN3O75935 186 aa18.87■□□□□ 0.61
ATXN2-227ENST00000616825 SMARCA1P28370 1054 aa18.87■□□□□ 0.61
ATXN2-227ENST00000616825 KLHL38Q2WGJ6 581 aa18.87■□□□□ 0.61
ATXN2-227ENST00000616825 HEATR6Q6AI08 1181 aaKnown RBP18.87■□□□□ 0.61
ATXN2-227ENST00000616825 TRIM59Q8IWR1 403 aa18.87■□□□□ 0.61
ATXN2-227ENST00000616825 NUP85Q9BW27 656 aa18.87■□□□□ 0.61
ATXN2-227ENST00000616825 VPS11Q9H270 941 aa18.87■□□□□ 0.61
ATXN2-227ENST00000616825 FAM96AQ9H5X1 160 aa18.87■□□□□ 0.61
ATXN2-227ENST00000616825 FAM217BQ9NTX9 383 aaPredicted RBP18.87■□□□□ 0.61
ATXN2-227ENST00000616825 OVOS2A0A0G2JMS6 1433 aa18.87■□□□□ 0.61
ATXN2-227ENST00000616825 OVOS2A0A0J9YW53 1432 aa18.87■□□□□ 0.61
ATXN2-227ENST00000616825 OVOS2Q6IE36 1432 aa18.87■□□□□ 0.61
ATXN2-227ENST00000616825 A0A0G2JND7 137 aa18.86■□□□□ 0.61
ATXN2-227ENST00000616825 NEMP1O14524 444 aa18.86■□□□□ 0.61
ATXN2-227ENST00000616825 AP3M2P53677 418 aa18.86■□□□□ 0.61
ATXN2-227ENST00000616825 KIAA1755Q5JYT7 1200 aa18.86■□□□□ 0.61
ATXN2-227ENST00000616825 IP6K2Q9UHH9 426 aa18.86■□□□□ 0.61
ATXN2-227ENST00000616825 MYO5CQ9NQX4 1742 aa18.86■□□□□ 0.61
ATXN2-227ENST00000616825 PFASO15067 1338 aa18.86■□□□□ 0.61
ATXN2-227ENST00000616825 SAMD9LQ8IVG5 1584 aa18.86■□□□□ 0.61
ATXN2-227ENST00000616825 ASB14A6NK59 587 aa18.86■□□□□ 0.61
ATXN2-227ENST00000616825 A8MXQ7 604 aa18.86■□□□□ 0.61
ATXN2-227ENST00000616825 PI4K2BG5E9Z4 385 aa18.86■□□□□ 0.61
ATXN2-227ENST00000616825 EYA4O95677 639 aa18.86■□□□□ 0.61
ATXN2-227ENST00000616825 MMEP08473 750 aa18.86■□□□□ 0.61
ATXN2-227ENST00000616825 EEF1B2P24534 225 aaKnown RBP18.86■□□□□ 0.61
ATXN2-227ENST00000616825 IFNA8P32881 189 aa18.86■□□□□ 0.61
ATXN2-227ENST00000616825 GLYCTKQ8IVS8 523 aa18.86■□□□□ 0.61
ATXN2-227ENST00000616825 MORC4Q8TE76 937 aa18.86■□□□□ 0.61
ATXN2-227ENST00000616825 TRPA1O75762 1119 aa18.86■□□□□ 0.61
ATXN2-227ENST00000616825 GUCY2CP25092 1073 aa18.86■□□□□ 0.61
ATXN2-227ENST00000616825 HOXD10P28358 340 aa18.86■□□□□ 0.61
ATXN2-227ENST00000616825 CHRNA3P32297 505 aa18.86■□□□□ 0.61
ATXN2-227ENST00000616825 ZNF211Q13398 564 aaPredicted RBP18.86■□□□□ 0.61
ATXN2-227ENST00000616825 URGCPQ8TCY9 931 aa18.86■□□□□ 0.61
ATXN2-227ENST00000616825 IFT43Q96FT9 208 aa18.86■□□□□ 0.61
ATXN2-227ENST00000616825 DDX47Q9H0S4 455 aaKnown RBP18.86■□□□□ 0.61
ATXN2-227ENST00000616825 ALDH8A1Q9H2A2 487 aaPredicted RBP18.86■□□□□ 0.61
ATXN2-227ENST00000616825 XAB2Q9HCS7 855 aaKnown RBP18.86■□□□□ 0.61
ATXN2-227ENST00000616825 APOBEC2Q9Y235 224 aaKnown RBP18.86■□□□□ 0.61
ATXN2-227ENST00000616825 ADGBQ8N7X0 1667 aa18.86■□□□□ 0.61
ATXN2-227ENST00000616825 A0A1W2PQC6 194 aa18.86■□□□□ 0.61
ATXN2-227ENST00000616825 TEX33O43247 280 aa18.86■□□□□ 0.61
ATXN2-227ENST00000616825 CREB3O43889 395 aa18.86■□□□□ 0.61
ATXN2-227ENST00000616825 DRP2Q13474 957 aa18.86■□□□□ 0.61
ATXN2-227ENST00000616825 PDCD2Q16342 344 aaPredicted RBP18.86■□□□□ 0.61
ATXN2-227ENST00000616825 FASTKD5Q7L8L6 764 aaKnown RBP18.86■□□□□ 0.61
ATXN2-227ENST00000616825 PPM1NQ8N819 430 aa18.86■□□□□ 0.61
ATXN2-227ENST00000616825 SPON2Q9BUD6 331 aa18.86■□□□□ 0.61
ATXN2-227ENST00000616825 CCSER1Q9C0I3 900 aa18.86■□□□□ 0.61
ATXN2-227ENST00000616825 TMEM247A6NEH6 219 aa18.85■□□□□ 0.61
ATXN2-227ENST00000616825 FOXO4P98177 505 aa18.85■□□□□ 0.61
ATXN2-227ENST00000616825 KCNB1Q14721 858 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms