RNA–Protein interactions for RNA: ENST00000615843.4

SPAST-203, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,212 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-203ENST00000615843 DOK7Q18PE1 504 aa20.07■□□□□ 0.8
SPAST-203ENST00000615843 KLC3Q6P597 504 aa20.07■□□□□ 0.8
SPAST-203ENST00000615843 SCARA5Q6ZMJ2 495 aa20.07■□□□□ 0.8
SPAST-203ENST00000615843 POTEB3A0JP26 581 aa20.07■□□□□ 0.8
SPAST-203ENST00000615843 POTECB2RU33 542 aa20.07■□□□□ 0.8
SPAST-203ENST00000615843 H3BQF6 201 aa20.07■□□□□ 0.8
SPAST-203ENST00000615843 TMTC4Q5T4D3 741 aa20.07■□□□□ 0.8
SPAST-203ENST00000615843 POTEBQ6S5H4 581 aa20.07■□□□□ 0.8
SPAST-203ENST00000615843 ADA2Q9NZK5 511 aa20.07■□□□□ 0.8
SPAST-203ENST00000615843 KDSRQ06136 332 aa20.06■□□□□ 0.8
SPAST-203ENST00000615843 PASD1Q8IV76 773 aa20.06■□□□□ 0.8
SPAST-203ENST00000615843 ISCUQ9H1K1 167 aa20.06■□□□□ 0.8
SPAST-203ENST00000615843 ALG13Q9NP73 1137 aaKnown RBP20.06■□□□□ 0.8
SPAST-203ENST00000615843 HEG1Q9ULI3 1381 aa20.06■□□□□ 0.8
SPAST-203ENST00000615843 PEX3P56589 373 aa20.06■□□□□ 0.8
SPAST-203ENST00000615843 CDO1Q16878 200 aa20.06■□□□□ 0.8
SPAST-203ENST00000615843 PRPF31Q8WWY3 499 aaKnown RBP20.06■□□□□ 0.8
SPAST-203ENST00000615843 SLC13A1Q9BZW2 595 aa20.06■□□□□ 0.8
SPAST-203ENST00000615843 LRRIQ3A6PVS8 624 aaPredicted RBP20.06■□□□□ 0.8
SPAST-203ENST00000615843 H0YIN7 160 aa20.06■□□□□ 0.8
SPAST-203ENST00000615843 INO80B-WBP1J3KQ70 363 aa20.06■□□□□ 0.8
SPAST-203ENST00000615843 MORF4L2Q15014 288 aa20.06■□□□□ 0.8
SPAST-203ENST00000615843 MYCBPAPQ8TBZ2 947 aa20.06■□□□□ 0.8
SPAST-203ENST00000615843 INO80BQ9C086 356 aaPredicted RBP20.06■□□□□ 0.8
SPAST-203ENST00000615843 DLGAP2Q9P1A6 1054 aa20.06■□□□□ 0.8
SPAST-203ENST00000615843 TRPM1Q7Z4N2 1603 aa20.06■□□□□ 0.8
SPAST-203ENST00000615843 PHF2O75151 1096 aa20.06■□□□□ 0.8
SPAST-203ENST00000615843 ENO1P06733 434 aaKnown RBP20.06■□□□□ 0.8
SPAST-203ENST00000615843 AP3B2Q13367 1082 aa20.06■□□□□ 0.8
SPAST-203ENST00000615843 CATSPER1Q8NEC5 780 aa20.06■□□□□ 0.8
SPAST-203ENST00000615843 SCHIP1Q9P0W5 487 aaPredicted RBP20.06■□□□□ 0.8
SPAST-203ENST00000615843 LCMT1Q9UIC8 334 aa20.06■□□□□ 0.8
SPAST-203ENST00000615843 SYCE1LA8MT33 242 aa20.05■□□□□ 0.8
SPAST-203ENST00000615843 M0QZ92 97 aa20.05■□□□□ 0.8
SPAST-203ENST00000615843 CYP2D6P10635 497 aa20.05■□□□□ 0.8
SPAST-203ENST00000615843 HOXA13P31271 388 aaPredicted RBP20.05■□□□□ 0.8
SPAST-203ENST00000615843 RHOT1Q8IXI2 618 aa20.05■□□□□ 0.8
SPAST-203ENST00000615843 TMEM35BQ8NCS4 154 aa20.05■□□□□ 0.8
SPAST-203ENST00000615843 NPHS2Q9NP85 383 aa20.05■□□□□ 0.8
SPAST-203ENST00000615843 PAIP2BQ9ULR5 123 aaKnown RBP20.05■□□□□ 0.8
SPAST-203ENST00000615843 TAC1P20366 129 aa20.05■□□□□ 0.8
SPAST-203ENST00000615843 SERPINB4P48594 390 aa20.05■□□□□ 0.8
SPAST-203ENST00000615843 USPL1Q5W0Q7 1092 aa20.05■□□□□ 0.8
SPAST-203ENST00000615843 TMEM47Q9BQJ4 181 aa20.05■□□□□ 0.8
SPAST-203ENST00000615843 TRIM9Q9C026 710 aa20.05■□□□□ 0.8
SPAST-203ENST00000615843 CPVLQ9H3G5 476 aa20.05■□□□□ 0.8
SPAST-203ENST00000615843 NGRNQ9NPE2 291 aaKnown RBP20.05■□□□□ 0.8
SPAST-203ENST00000615843 NMT2O60551 498 aa20.05■□□□□ 0.8
SPAST-203ENST00000615843 MARK3P27448 753 aa20.05■□□□□ 0.8
SPAST-203ENST00000615843 ATICP31939 592 aa20.05■□□□□ 0.8
SPAST-203ENST00000615843 RNF169Q8NCN4 708 aa20.05■□□□□ 0.8
SPAST-203ENST00000615843 PLA2R1Q13018 1463 aa20.05■□□□□ 0.8
SPAST-203ENST00000615843 RFX1P22670 979 aa20.05■□□□□ 0.8
SPAST-203ENST00000615843 BZW1Q7L1Q6 419 aaKnown RBP20.05■□□□□ 0.8
SPAST-203ENST00000615843 CHEK2O96017 543 aa20.04■□□□□ 0.8
SPAST-203ENST00000615843 CYTH1Q15438 398 aa20.04■□□□□ 0.8
SPAST-203ENST00000615843 AS3MTQ9HBK9 375 aa20.04■□□□□ 0.8
SPAST-203ENST00000615843 SUN2Q9UH99 717 aa20.04■□□□□ 0.8
SPAST-203ENST00000615843 PPME1Q9Y570 386 aa20.04■□□□□ 0.8
SPAST-203ENST00000615843 CDHR2Q9BYE9 1310 aa20.04■□□□□ 0.8
SPAST-203ENST00000615843 CNGA3Q16281 694 aa20.04■□□□□ 0.8
SPAST-203ENST00000615843 DDX42Q86XP3 938 aaKnown RBP eCLIP20.04■□□□□ 0.8
SPAST-203ENST00000615843 L3MBTL1Q9Y468 752 aa20.04■□□□□ 0.8
SPAST-203ENST00000615843 TMEM120BA0PK00 339 aa20.04■□□□□ 0.8
SPAST-203ENST00000615843 FOXP2O15409 715 aa20.04■□□□□ 0.8
SPAST-203ENST00000615843 CALB1P05937 261 aa20.04■□□□□ 0.8
SPAST-203ENST00000615843 FRMD5Q7Z6J6 570 aa20.04■□□□□ 0.8
SPAST-203ENST00000615843 ZBTB33Q86T24 672 aa20.04■□□□□ 0.8
SPAST-203ENST00000615843 C7orf31Q8N865 590 aa20.04■□□□□ 0.8
SPAST-203ENST00000615843 C3orf20Q8ND61 904 aa20.04■□□□□ 0.8
SPAST-203ENST00000615843 ATL2Q8NHH9 583 aa20.04■□□□□ 0.8
SPAST-203ENST00000615843 ARL8AQ96BM9 186 aa20.04■□□□□ 0.8
SPAST-203ENST00000615843 FUCA2Q9BTY2 467 aa20.04■□□□□ 0.8
SPAST-203ENST00000615843 RANBP17Q9H2T7 1088 aaKnown RBP20.04■□□□□ 0.8
SPAST-203ENST00000615843 UBN1Q9NPG3 1134 aa20.04■□□□□ 0.8
SPAST-203ENST00000615843 LTKP29376 864 aa20.04■□□□□ 0.8
SPAST-203ENST00000615843 CRKLP46109 303 aaKnown RBP20.04■□□□□ 0.8
SPAST-203ENST00000615843 LRRC36Q1X8D7 754 aa20.04■□□□□ 0.8
SPAST-203ENST00000615843 PPP6R3Q5H9R7 873 aaPredicted RBP20.04■□□□□ 0.8
SPAST-203ENST00000615843 RYBPQ8N488 228 aaPredicted RBP20.04■□□□□ 0.8
SPAST-203ENST00000615843 USP38Q8NB14 1042 aa20.04■□□□□ 0.8
SPAST-203ENST00000615843 VCPKMTQ9H867 229 aa20.04■□□□□ 0.8
SPAST-203ENST00000615843 BARHL2Q9NY43 387 aa20.04■□□□□ 0.8
SPAST-203ENST00000615843 FAM47DPA6NHR8 397 aa20.03■□□□□ 0.8
SPAST-203ENST00000615843 PRKG1Q13976 671 aa20.03■□□□□ 0.8
SPAST-203ENST00000615843 NBPF20Q3BBV1 942 aa20.03■□□□□ 0.8
SPAST-203ENST00000615843 DNAL1Q4LDG9 190 aa20.03■□□□□ 0.8
SPAST-203ENST00000615843 SKA2Q8WVK7 121 aaPredicted RBP20.03■□□□□ 0.8
SPAST-203ENST00000615843 HEXIM2Q96MH2 286 aaKnown RBP20.03■□□□□ 0.8
SPAST-203ENST00000615843 GTSE1Q9NYZ3 720 aa20.03■□□□□ 0.8
SPAST-203ENST00000615843 INPP5FQ9Y2H2 1132 aa20.03■□□□□ 0.8
SPAST-203ENST00000615843 CPDO75976 1380 aa20.03■□□□□ 0.8
SPAST-203ENST00000615843 AP5Z1O43299 807 aa20.03■□□□□ 0.8
SPAST-203ENST00000615843 GDF11O95390 407 aa20.03■□□□□ 0.8
SPAST-203ENST00000615843 SYDE1Q6ZW31 735 aaPredicted RBP20.03■□□□□ 0.8
SPAST-203ENST00000615843 VPS39Q96JC1 886 aa20.03■□□□□ 0.8
SPAST-203ENST00000615843 TMEM260Q9NX78 707 aa20.03■□□□□ 0.8
SPAST-203ENST00000615843 PRR36Q9H6K5 1346 aa20.03■□□□□ 0.8
SPAST-203ENST00000615843 VAMP7P51809 220 aa20.03■□□□□ 0.8
SPAST-203ENST00000615843 ALDH18A1P54886 795 aaKnown RBP20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms