RNA–Protein interactions for RNA: ENST00000614931.1

PCDH9-205, Transcript of protocadherin 9, humanhuman

TSL 1 (best)

Gene PCDH9, Length 461 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-205ENST00000614931 STX17P56962 302 aa8.87□□□□□ -0.99
PCDH9-205ENST00000614931 KCNA1Q09470 495 aa8.87□□□□□ -0.99
PCDH9-205ENST00000614931 CAPSQ13938 189 aa8.87□□□□□ -0.99
PCDH9-205ENST00000614931 NCAPHQ15003 741 aa8.87□□□□□ -0.99
PCDH9-205ENST00000614931 IQCB1Q15051 598 aa8.87□□□□□ -0.99
PCDH9-205ENST00000614931 ZC2HC1CQ53FD0 456 aaPredicted RBP8.87□□□□□ -0.99
PCDH9-205ENST00000614931 COBLL1Q53SF7 1204 aa8.87□□□□□ -0.99
PCDH9-205ENST00000614931 ODR4Q5SWX8 454 aa8.87□□□□□ -0.99
PCDH9-205ENST00000614931 KLHL10Q6JEL2 608 aa8.87□□□□□ -0.99
PCDH9-205ENST00000614931 EFCAB12Q6NXP0 572 aa8.87□□□□□ -0.99
PCDH9-205ENST00000614931 TAS1R3Q7RTX0 852 aa8.87□□□□□ -0.99
PCDH9-205ENST00000614931 RPUSD2Q8IZ73 545 aaKnown RBP8.87□□□□□ -0.99
PCDH9-205ENST00000614931 RNF214Q8ND24 703 aa8.87□□□□□ -0.99
PCDH9-205ENST00000614931 SCFD1Q8WVM8 642 aa8.87□□□□□ -0.99
PCDH9-205ENST00000614931 WNT8BQ93098 351 aa8.87□□□□□ -0.99
PCDH9-205ENST00000614931 SCLYQ96I15 445 aa8.87□□□□□ -0.99
PCDH9-205ENST00000614931 ZNF668Q96K58 619 aaPredicted RBP8.87□□□□□ -0.99
PCDH9-205ENST00000614931 DRC1Q96MC2 740 aa8.87□□□□□ -0.99
PCDH9-205ENST00000614931 FAM161BQ96MY7 647 aa8.87□□□□□ -0.99
PCDH9-205ENST00000614931 CTAGE1Q96RT6 745 aa8.87□□□□□ -0.99
PCDH9-205ENST00000614931 TIPINQ9BVW5 301 aa8.87□□□□□ -0.99
PCDH9-205ENST00000614931 OLFML3Q9NRN5 406 aa8.87□□□□□ -0.99
PCDH9-205ENST00000614931 RMND1Q9NWS8 449 aa8.87□□□□□ -0.99
PCDH9-205ENST00000614931 CXXC1Q9P0U4 656 aaPredicted RBP8.87□□□□□ -0.99
PCDH9-205ENST00000614931 PPME1Q9Y570 386 aa8.87□□□□□ -0.99
PCDH9-205ENST00000614931 LAMA2P24043 3122 aaKnown RBP8.87□□□□□ -0.99
PCDH9-205ENST00000614931 TRIP11Q15643 1979 aa8.86□□□□□ -0.99
PCDH9-205ENST00000614931 TANC1Q9C0D5 1861 aa8.86□□□□□ -0.99
PCDH9-205ENST00000614931 FSD2A1L4K1 749 aa8.86□□□□□ -0.99
PCDH9-205ENST00000614931 K7ENM7 598 aa8.86□□□□□ -0.99
PCDH9-205ENST00000614931 TREHO43280 583 aa8.86□□□□□ -0.99
PCDH9-205ENST00000614931 EDN1P05305 212 aa8.86□□□□□ -0.99
PCDH9-205ENST00000614931 PFKMP08237 780 aa8.86□□□□□ -0.99
PCDH9-205ENST00000614931 DNAJB2P25686 324 aa8.86□□□□□ -0.99
PCDH9-205ENST00000614931 RFC2P35250 354 aa8.86□□□□□ -0.99
PCDH9-205ENST00000614931 NPTX2P47972 431 aa8.86□□□□□ -0.99
PCDH9-205ENST00000614931 PSMD2Q13200 908 aa8.86□□□□□ -0.99
PCDH9-205ENST00000614931 BFSP2Q13515 415 aa8.86□□□□□ -0.99
PCDH9-205ENST00000614931 PTGISQ16647 500 aa8.86□□□□□ -0.99
PCDH9-205ENST00000614931 GDF6Q6KF10 455 aaPredicted RBP8.86□□□□□ -0.99
PCDH9-205ENST00000614931 LUZP1Q86V48 1076 aa8.86□□□□□ -0.99
PCDH9-205ENST00000614931 DHX40Q8IX18 779 aaKnown RBP8.86□□□□□ -0.99
PCDH9-205ENST00000614931 NELFCDQ8IXH7 590 aa8.86□□□□□ -0.99
PCDH9-205ENST00000614931 KIAA0319LQ8IZA0 1049 aa8.86□□□□□ -0.99
PCDH9-205ENST00000614931 GUF1Q8N442 669 aaKnown RBP8.86□□□□□ -0.99
PCDH9-205ENST00000614931 AOPEPQ8N6M6 819 aa8.86□□□□□ -0.99
PCDH9-205ENST00000614931 MLKLQ8NB16 471 aa8.86□□□□□ -0.99
PCDH9-205ENST00000614931 TMEM161BQ8NDZ6 487 aa8.86□□□□□ -0.99
PCDH9-205ENST00000614931 SLC7A3Q8WY07 619 aa8.86□□□□□ -0.99
PCDH9-205ENST00000614931 KIFAP3Q92845 792 aa8.86□□□□□ -0.99
PCDH9-205ENST00000614931 CCDC47Q96A33 483 aaKnown RBP8.86□□□□□ -0.99
PCDH9-205ENST00000614931 PPP1R16BQ96T49 567 aa8.86□□□□□ -0.99
PCDH9-205ENST00000614931 CDX2Q99626 313 aaPredicted RBP8.86□□□□□ -0.99
PCDH9-205ENST00000614931 DUSP9Q99956 384 aaKnown RBP8.86□□□□□ -0.99
PCDH9-205ENST00000614931 KATNAL1Q9BW62 490 aa8.86□□□□□ -0.99
PCDH9-205ENST00000614931 HSD3B7Q9H2F3 369 aa8.86□□□□□ -0.99
PCDH9-205ENST00000614931 MTIF3Q9H2K0 278 aaKnown RBP8.86□□□□□ -0.99
PCDH9-205ENST00000614931 MRPL44Q9H9J2 332 aaKnown RBP8.86□□□□□ -0.99
PCDH9-205ENST00000614931 SUGCTQ9HAC7 445 aa8.86□□□□□ -0.99
PCDH9-205ENST00000614931 ARHGAP28Q9P2N2 729 aa8.86□□□□□ -0.99
PCDH9-205ENST00000614931 SEL1LQ9UBV2 794 aa8.86□□□□□ -0.99
PCDH9-205ENST00000614931 GTF2IRD1Q9UHL9 959 aa8.86□□□□□ -0.99
PCDH9-205ENST00000614931 SCN5AQ14524 2016 aa8.86□□□□□ -0.99
PCDH9-205ENST00000614931 NRCAMQ92823 1304 aa8.85□□□□□ -0.99
PCDH9-205ENST00000614931 C17orf102A2RUQ5 167 aa8.85□□□□□ -0.99
PCDH9-205ENST00000614931 RRN3P2A6NIE6 340 aa8.85□□□□□ -0.99
PCDH9-205ENST00000614931 GRXCR1A8MXD5 290 aa8.85□□□□□ -0.99
PCDH9-205ENST00000614931 EIF3DO15371 548 aaKnown RBP eCLIP8.85□□□□□ -0.99
PCDH9-205ENST00000614931 MAGEB2O15479 319 aa8.85□□□□□ -0.99
PCDH9-205ENST00000614931 GAS2O43903 313 aaKnown RBP8.85□□□□□ -0.99
PCDH9-205ENST00000614931 GCNT3O95395 438 aa8.85□□□□□ -0.99
PCDH9-205ENST00000614931 VTNP04004 478 aa8.85□□□□□ -0.99
PCDH9-205ENST00000614931 IQCF3P0C7M6 154 aa8.85□□□□□ -0.99
PCDH9-205ENST00000614931 MAPTP10636 758 aaKnown RBP8.85□□□□□ -0.99
PCDH9-205ENST00000614931 PBX2P40425 430 aa8.85□□□□□ -0.99
PCDH9-205ENST00000614931 ZNF165P49910 485 aa8.85□□□□□ -0.99
PCDH9-205ENST00000614931 RBL2Q08999 1139 aa8.85□□□□□ -0.99
PCDH9-205ENST00000614931 LAMTOR4Q0VGL1 99 aa8.85□□□□□ -0.99
PCDH9-205ENST00000614931 PAK1Q13153 545 aa8.85□□□□□ -0.99
PCDH9-205ENST00000614931 BMT2Q1RMZ1 405 aa8.85□□□□□ -0.99
PCDH9-205ENST00000614931 ZCWPW2Q504Y3 356 aa8.85□□□□□ -0.99
PCDH9-205ENST00000614931 IER5Q5VY09 327 aa8.85□□□□□ -0.99
PCDH9-205ENST00000614931 TTI2Q6NXR4 508 aa8.85□□□□□ -0.99
PCDH9-205ENST00000614931 OTOP2Q7RTS6 562 aa8.85□□□□□ -0.99
PCDH9-205ENST00000614931 ZNF720Q7Z2F6 126 aa8.85□□□□□ -0.99
PCDH9-205ENST00000614931 HAUS6Q7Z4H7 955 aa8.85□□□□□ -0.99
PCDH9-205ENST00000614931 FAM178BQ8IXR5 827 aa8.85□□□□□ -0.99
PCDH9-205ENST00000614931 MYOCDQ8IZQ8 938 aa8.85□□□□□ -0.99
PCDH9-205ENST00000614931 METTL13Q8N6R0 699 aa8.85□□□□□ -0.99
PCDH9-205ENST00000614931 C7orf31Q8N865 590 aa8.85□□□□□ -0.99
PCDH9-205ENST00000614931 RETREG2Q8NC44 543 aa8.85□□□□□ -0.99
PCDH9-205ENST00000614931 ZNF507Q8TCN5 953 aa8.85□□□□□ -0.99
PCDH9-205ENST00000614931 FAM200AQ8TCP9 573 aa8.85□□□□□ -0.99
PCDH9-205ENST00000614931 SPIRE2Q8WWL2 714 aa8.85□□□□□ -0.99
PCDH9-205ENST00000614931 PRPF31Q8WWY3 499 aaKnown RBP8.85□□□□□ -0.99
PCDH9-205ENST00000614931 NELFBQ8WX92 580 aa8.85□□□□□ -0.99
PCDH9-205ENST00000614931 DHX38Q92620 1227 aaKnown RBP8.85□□□□□ -0.99
PCDH9-205ENST00000614931 BPIFA3Q9BQP9 254 aa8.85□□□□□ -0.99
PCDH9-205ENST00000614931 ANP32EQ9BTT0 268 aa8.85□□□□□ -0.99
PCDH9-205ENST00000614931 PBX4Q9BYU1 374 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms