RNA–Protein interactions for RNA: ENST00000613424.4

IRF1-211, Transcript of interferon regulatory factor 1, humanhuman

TSL 1 (best) BASIC

Gene IRF1, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-211ENST00000613424 FAM117BQ6P1L5 589 aa18.36■□□□□ 0.53
IRF1-211ENST00000613424 IQUBQ8NA54 791 aa18.36■□□□□ 0.53
IRF1-211ENST00000613424 DEPTORQ8TB45 409 aa18.36■□□□□ 0.53
IRF1-211ENST00000613424 DHX58Q96C10 678 aa18.36■□□□□ 0.53
IRF1-211ENST00000613424 REEP2Q9BRK0 252 aa18.36■□□□□ 0.53
IRF1-211ENST00000613424 PBX4Q9BYU1 374 aa18.36■□□□□ 0.53
IRF1-211ENST00000613424 C2orf40Q9H1Z8 148 aa18.36■□□□□ 0.53
IRF1-211ENST00000613424 C17orf75Q9HAS0 396 aa18.36■□□□□ 0.53
IRF1-211ENST00000613424 KCNH3Q9ULD8 1083 aa18.36■□□□□ 0.53
IRF1-211ENST00000613424 ODF2LQ9ULJ1 636 aa18.36■□□□□ 0.53
IRF1-211ENST00000613424 A0A1B0GVL5 298 aa18.35■□□□□ 0.53
IRF1-211ENST00000613424 MYMKA6NI61 221 aa18.35■□□□□ 0.53
IRF1-211ENST00000613424 CCDC169A6NNP5 214 aa18.35■□□□□ 0.53
IRF1-211ENST00000613424 C9IYK1 514 aa18.35■□□□□ 0.53
IRF1-211ENST00000613424 GJB5O95377 273 aa18.35■□□□□ 0.53
IRF1-211ENST00000613424 PLS3P13797 630 aa18.35■□□□□ 0.53
IRF1-211ENST00000613424 MYOGP15173 224 aa18.35■□□□□ 0.53
IRF1-211ENST00000613424 HOXA11P31270 313 aaPredicted RBP18.35■□□□□ 0.53
IRF1-211ENST00000613424 NPTX2P47972 431 aa18.35■□□□□ 0.53
IRF1-211ENST00000613424 FAM189BP81408 668 aa18.35■□□□□ 0.53
IRF1-211ENST00000613424 DMP1Q13316 513 aaPredicted RBP18.35■□□□□ 0.53
IRF1-211ENST00000613424 PCBP1Q15365 356 aaKnown RBP eCLIP18.35■□□□□ 0.53
IRF1-211ENST00000613424 AMHR2Q16671 573 aa18.35■□□□□ 0.53
IRF1-211ENST00000613424 TPRNQ4KMQ1 711 aa18.35■□□□□ 0.53
IRF1-211ENST00000613424 SLC24A5Q71RS6 500 aa18.35■□□□□ 0.53
IRF1-211ENST00000613424 ZBTB8OSQ8IWT0 167 aa18.35■□□□□ 0.53
IRF1-211ENST00000613424 CRIPAKQ8N1N5 446 aa18.35■□□□□ 0.53
IRF1-211ENST00000613424 ZBED2Q9BTP6 218 aa18.35■□□□□ 0.53
IRF1-211ENST00000613424 KIFC3Q9BVG8 833 aa18.35■□□□□ 0.53
IRF1-211ENST00000613424 FZD8Q9H461 694 aa18.35■□□□□ 0.53
IRF1-211ENST00000613424 CUEDC2Q9H467 287 aa18.35■□□□□ 0.53
IRF1-211ENST00000613424 C1orf112Q9NSG2 853 aa18.35■□□□□ 0.53
IRF1-211ENST00000613424 AGPAT5Q9NUQ2 364 aa18.35■□□□□ 0.53
IRF1-211ENST00000613424 PIN4Q9Y237 131 aaKnown RBP18.35■□□□□ 0.53
IRF1-211ENST00000613424 TTC3P53804 2025 aa18.34■□□□□ 0.53
IRF1-211ENST00000613424 ADGRA3Q8IWK6 1321 aa18.34■□□□□ 0.53
IRF1-211ENST00000613424 A0A1W2PQ27 194 aa18.34■□□□□ 0.53
IRF1-211ENST00000613424 A0A1W2PQ64 194 aa18.34■□□□□ 0.53
IRF1-211ENST00000613424 A0A1W2PQD8 194 aa18.34■□□□□ 0.53
IRF1-211ENST00000613424 TLL1O43897 1013 aa18.34■□□□□ 0.53
IRF1-211ENST00000613424 TSPAN1O60635 241 aa18.34■□□□□ 0.53
IRF1-211ENST00000613424 ERLIN2O94905 339 aa18.34■□□□□ 0.53
IRF1-211ENST00000613424 PFKFB1P16118 471 aa18.34■□□□□ 0.53
IRF1-211ENST00000613424 SARSP49591 514 aaKnown RBP18.34■□□□□ 0.53
IRF1-211ENST00000613424 FXR1P51114 621 aaKnown RBP eCLIP18.34■□□□□ 0.53
IRF1-211ENST00000613424 DYMQ7RTS9 669 aa18.34■□□□□ 0.53
IRF1-211ENST00000613424 DDX12PQ92771 950 aa18.34■□□□□ 0.53
IRF1-211ENST00000613424 STAMQ92783 540 aa18.34■□□□□ 0.53
IRF1-211ENST00000613424 NTPCRQ9BSD7 190 aaKnown RBP18.34■□□□□ 0.53
IRF1-211ENST00000613424 KMT5AQ9NQR1 393 aa18.34■□□□□ 0.53
IRF1-211ENST00000613424 DACT1Q9NYF0 836 aa18.34■□□□□ 0.53
IRF1-211ENST00000613424 MSRAQ9UJ68 235 aa18.34■□□□□ 0.53
IRF1-211ENST00000613424 HPSEQ9Y251 543 aa18.34■□□□□ 0.53
IRF1-211ENST00000613424 YBX2Q9Y2T7 364 aaKnown RBP18.34■□□□□ 0.53
IRF1-211ENST00000613424 PCDHA11Q9Y5I1 949 aa18.34■□□□□ 0.53
IRF1-211ENST00000613424 FAM237AA0A1B0GTK4 181 aa18.33■□□□□ 0.52
IRF1-211ENST00000613424 FAM13AO94988 1023 aa18.33■□□□□ 0.52
IRF1-211ENST00000613424 IBSPP21815 317 aaPredicted RBP18.33■□□□□ 0.52
IRF1-211ENST00000613424 DNAJB2P25686 324 aa18.33■□□□□ 0.52
IRF1-211ENST00000613424 AXLP30530 894 aa18.33■□□□□ 0.52
IRF1-211ENST00000613424 ZNF131P52739 623 aa18.33■□□□□ 0.52
IRF1-211ENST00000613424 EFNA5P52803 228 aa18.33■□□□□ 0.52
IRF1-211ENST00000613424 NCBP1Q09161 790 aaKnown RBP18.33■□□□□ 0.52
IRF1-211ENST00000613424 RAB30Q15771 203 aa18.33■□□□□ 0.52
IRF1-211ENST00000613424 FAM187BQ17R55 369 aa18.33■□□□□ 0.52
IRF1-211ENST00000613424 TWF2Q6IBS0 349 aaKnown RBP18.33■□□□□ 0.52
IRF1-211ENST00000613424 NPAS4Q8IUM7 802 aa18.33■□□□□ 0.52
IRF1-211ENST00000613424 MYCT1Q8N699 235 aa18.33■□□□□ 0.52
IRF1-211ENST00000613424 SPIRE2Q8WWL2 714 aa18.33■□□□□ 0.52
IRF1-211ENST00000613424 DNAJC19Q96DA6 116 aa18.33■□□□□ 0.52
IRF1-211ENST00000613424 CPB2Q96IY4 423 aa18.33■□□□□ 0.52
IRF1-211ENST00000613424 RAD9AQ99638 391 aa18.33■□□□□ 0.52
IRF1-211ENST00000613424 PYM1Q9BRP8 204 aaKnown RBP18.33■□□□□ 0.52
IRF1-211ENST00000613424 CCDC113Q9H0I3 377 aa18.33■□□□□ 0.52
IRF1-211ENST00000613424 PARVGQ9HBI0 331 aa18.33■□□□□ 0.52
IRF1-211ENST00000613424 PRMT7Q9NVM4 692 aaPredicted RBP18.33■□□□□ 0.52
IRF1-211ENST00000613424 KBTBD4Q9NVX7 518 aa18.33■□□□□ 0.52
IRF1-211ENST00000613424 LARSQ9P2J5 1176 aaKnown RBP18.33■□□□□ 0.52
IRF1-211ENST00000613424 KCNG1Q9UIX4 513 aa18.33■□□□□ 0.52
IRF1-211ENST00000613424 PCDHB7Q9Y5E2 793 aa18.33■□□□□ 0.52
IRF1-211ENST00000613424 MYH11P35749 1972 aa18.33■□□□□ 0.52
IRF1-211ENST00000613424 SZT2Q5T011 3432 aa18.33■□□□□ 0.52
IRF1-211ENST00000613424 A0A0U1RQF3 1178 aa18.32■□□□□ 0.52
IRF1-211ENST00000613424 K7ERI5 159 aa18.32■□□□□ 0.52
IRF1-211ENST00000613424 SLC16A4O15374 487 aa18.32■□□□□ 0.52
IRF1-211ENST00000613424 B4GALT5O43286 388 aa18.32■□□□□ 0.52
IRF1-211ENST00000613424 PRKCBP05771 671 aa18.32■□□□□ 0.52
IRF1-211ENST00000613424 STAG3L1P0CL83 205 aa18.32■□□□□ 0.52
IRF1-211ENST00000613424 ARF4P18085 180 aaPredicted RBP18.32■□□□□ 0.52
IRF1-211ENST00000613424 LIG1P18858 919 aa18.32■□□□□ 0.52
IRF1-211ENST00000613424 NDUFA8P51970 172 aa18.32■□□□□ 0.52
IRF1-211ENST00000613424 SMTNP53814 917 aa18.32■□□□□ 0.52
IRF1-211ENST00000613424 HTRA4P83105 476 aaPredicted RBP18.32■□□□□ 0.52
IRF1-211ENST00000613424 MAPK6Q16659 721 aa18.32■□□□□ 0.52
IRF1-211ENST00000613424 PPP4R3CPQ6ZMV5 832 aa18.32■□□□□ 0.52
IRF1-211ENST00000613424 FSIP1Q8NA03 581 aa18.32■□□□□ 0.52
IRF1-211ENST00000613424 PRIMPOLQ96LW4 560 aa18.32■□□□□ 0.52
IRF1-211ENST00000613424 TRAIPQ9BWF2 469 aa18.32■□□□□ 0.52
IRF1-211ENST00000613424 TNMDQ9H2S6 317 aa18.32■□□□□ 0.52
IRF1-211ENST00000613424 ZHX3Q9H4I2 956 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms