RNA–Protein interactions for RNA: ENST00000612946.4

TTC28-208, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TTC28, Length 11,274 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-208ENST00000612946 SNTNA6NMZ2 147 aa9.31□□□□□ -0.92
TTC28-208ENST00000612946 CACNA2D1P54289 1103 aa9.31□□□□□ -0.92
TTC28-208ENST00000612946 ILF2Q12905 390 aaKnown RBP9.31□□□□□ -0.92
TTC28-208ENST00000612946 RTL3Q8N8U3 475 aaKnown RBP9.31□□□□□ -0.92
TTC28-208ENST00000612946 PRMT1Q99873 361 aaKnown RBP9.31□□□□□ -0.92
TTC28-208ENST00000612946 ENOPH1Q9UHY7 261 aa9.31□□□□□ -0.92
TTC28-208ENST00000612946 SUPT3HO75486 399 aa9.31□□□□□ -0.92
TTC28-208ENST00000612946 ATP6V1G2O95670 118 aa9.31□□□□□ -0.92
TTC28-208ENST00000612946 ITGA9Q13797 1035 aa9.31□□□□□ -0.92
TTC28-208ENST00000612946 AKNAD1Q5T1N1 836 aa9.31□□□□□ -0.92
TTC28-208ENST00000612946 MB21D1Q8N884 522 aa9.31□□□□□ -0.92
TTC28-208ENST00000612946 LARP4BQ92615 738 aaKnown RBP9.31□□□□□ -0.92
TTC28-208ENST00000612946 SNRKQ9NRH2 765 aa9.31□□□□□ -0.92
TTC28-208ENST00000612946 ADA2Q9NZK5 511 aa9.31□□□□□ -0.92
TTC28-208ENST00000612946 CDC42BPAQ5VT25 1732 aa9.31□□□□□ -0.92
TTC28-208ENST00000612946 ABCA9Q8IUA7 1624 aa9.3□□□□□ -0.92
TTC28-208ENST00000612946 H3BNX3 289 aa9.3□□□□□ -0.92
TTC28-208ENST00000612946 ZBTB22O15209 634 aa9.3□□□□□ -0.92
TTC28-208ENST00000612946 CAND2O75155 1236 aa9.3□□□□□ -0.92
TTC28-208ENST00000612946 PRDM1O75626 825 aa9.3□□□□□ -0.92
TTC28-208ENST00000612946 WFS1O76024 890 aa9.3□□□□□ -0.92
TTC28-208ENST00000612946 TOMM70O94826 608 aa9.3□□□□□ -0.92
TTC28-208ENST00000612946 SRGAP2CP0DJJ0 459 aa9.3□□□□□ -0.92
TTC28-208ENST00000612946 AKAP4Q5JQC9 854 aa9.3□□□□□ -0.92
TTC28-208ENST00000612946 EIF1ADQ8N9N8 165 aaKnown RBP9.3□□□□□ -0.92
TTC28-208ENST00000612946 SSH3Q8TE77 659 aa9.3□□□□□ -0.92
TTC28-208ENST00000612946 TINF2Q9BSI4 451 aa9.3□□□□□ -0.92
TTC28-208ENST00000612946 MTA3Q9BTC8 594 aa9.3□□□□□ -0.92
TTC28-208ENST00000612946 DDX56Q9NY93 547 aaKnown RBP9.3□□□□□ -0.92
TTC28-208ENST00000612946 SQORQ9Y6N5 450 aa9.3□□□□□ -0.92
TTC28-208ENST00000612946 NOP56O00567 594 aaKnown RBP9.3□□□□□ -0.92
TTC28-208ENST00000612946 TAP1Q03518 808 aa9.3□□□□□ -0.92
TTC28-208ENST00000612946 TRMT2AQ8IZ69 625 aaKnown RBP9.3□□□□□ -0.92
TTC28-208ENST00000612946 S100ZQ8WXG8 99 aa9.3□□□□□ -0.92
TTC28-208ENST00000612946 GPR101Q96P66 508 aaPredicted RBP9.3□□□□□ -0.92
TTC28-208ENST00000612946 NDST4Q9H3R1 872 aa9.3□□□□□ -0.92
TTC28-208ENST00000612946 MROH5Q6ZUA9 1318 aa9.3□□□□□ -0.92
TTC28-208ENST00000612946 CROCCQ5TZA2 2017 aa9.3□□□□□ -0.92
TTC28-208ENST00000612946 NPR1P16066 1061 aa9.3□□□□□ -0.92
TTC28-208ENST00000612946 JAK1P23458 1154 aa9.3□□□□□ -0.92
TTC28-208ENST00000612946 SERPINB9P50453 376 aa9.3□□□□□ -0.92
TTC28-208ENST00000612946 COPAP53621 1224 aa9.3□□□□□ -0.92
TTC28-208ENST00000612946 DHX40Q8IX18 779 aaKnown RBP9.3□□□□□ -0.92
TTC28-208ENST00000612946 IFNL2Q8IZJ0 200 aa9.3□□□□□ -0.92
TTC28-208ENST00000612946 NCLNQ969V3 563 aa9.3□□□□□ -0.92
TTC28-208ENST00000612946 ATP6V1HQ9UI12 483 aa9.3□□□□□ -0.92
TTC28-208ENST00000612946 PARP3Q9Y6F1 533 aa9.3□□□□□ -0.92
TTC28-208ENST00000612946 H7C0C1 242 aa9.3□□□□□ -0.92
TTC28-208ENST00000612946 RAP1GAPP47736 663 aa9.3□□□□□ -0.92
TTC28-208ENST00000612946 ATP5OP48047 213 aa9.3□□□□□ -0.92
TTC28-208ENST00000612946 SLC7A5Q01650 507 aa9.3□□□□□ -0.92
TTC28-208ENST00000612946 RGS21Q2M5E4 152 aa9.3□□□□□ -0.92
TTC28-208ENST00000612946 BLZF1Q9H2G9 400 aa9.3□□□□□ -0.92
TTC28-208ENST00000612946 CD248Q9HCU0 757 aa9.3□□□□□ -0.92
TTC28-208ENST00000612946 ACADVLP49748 655 aa9.3□□□□□ -0.92
TTC28-208ENST00000612946 TFCP2Q12800 502 aa9.3□□□□□ -0.92
TTC28-208ENST00000612946 TRIM72Q6ZMU5 477 aa9.3□□□□□ -0.92
TTC28-208ENST00000612946 KRT73Q86Y46 540 aa9.3□□□□□ -0.92
TTC28-208ENST00000612946 FUT8Q9BYC5 575 aa9.3□□□□□ -0.92
TTC28-208ENST00000612946 TMEM206Q9H813 350 aa9.3□□□□□ -0.92
TTC28-208ENST00000612946 SAYSD1Q9NPB0 183 aa9.3□□□□□ -0.92
TTC28-208ENST00000612946 TUBGCP4Q9UGJ1 667 aa9.3□□□□□ -0.92
TTC28-208ENST00000612946 DTNAQ9Y4J8 743 aa9.3□□□□□ -0.92
TTC28-208ENST00000612946 HOXB6P17509 224 aaKnown RBP9.3□□□□□ -0.92
TTC28-208ENST00000612946 ATP4AP20648 1035 aa9.3□□□□□ -0.92
TTC28-208ENST00000612946 TRIM71Q2Q1W2 868 aaKnown RBP9.3□□□□□ -0.92
TTC28-208ENST00000612946 EFL1Q7Z2Z2 1120 aaKnown RBP9.3□□□□□ -0.92
TTC28-208ENST00000612946 ZNF554Q86TJ5 538 aa9.3□□□□□ -0.92
TTC28-208ENST00000612946 ARHGEF5Q12774 1597 aa9.3□□□□□ -0.92
TTC28-208ENST00000612946 BCL10O95999 233 aa9.3□□□□□ -0.92
TTC28-208ENST00000612946 NR2F2P24468 414 aa9.3□□□□□ -0.92
TTC28-208ENST00000612946 KRT72Q14CN4 511 aa9.3□□□□□ -0.92
TTC28-208ENST00000612946 SPATA5Q8NB90 893 aa9.3□□□□□ -0.92
TTC28-208ENST00000612946 ISCUQ9H1K1 167 aa9.3□□□□□ -0.92
TTC28-208ENST00000612946 KCNA2P16389 499 aa9.3□□□□□ -0.92
TTC28-208ENST00000612946 LRRC31Q6UY01 552 aa9.3□□□□□ -0.92
TTC28-208ENST00000612946 OTUD5Q96G74 571 aa9.3□□□□□ -0.92
TTC28-208ENST00000612946 ADNPQ9H2P0 1102 aa9.3□□□□□ -0.92
TTC28-208ENST00000612946 PRG3Q9Y2Y8 225 aaPredicted RBP9.3□□□□□ -0.92
TTC28-208ENST00000612946 CASP2P42575 452 aa9.3□□□□□ -0.92
TTC28-208ENST00000612946 RESTQ13127 1097 aa9.3□□□□□ -0.92
TTC28-208ENST00000612946 OTULINQ96BN8 352 aa9.3□□□□□ -0.92
TTC28-208ENST00000612946 WDR24Q96S15 920 aa9.3□□□□□ -0.92
TTC28-208ENST00000612946 PDS5AQ29RF7 1337 aaKnown RBP9.29□□□□□ -0.92
TTC28-208ENST00000612946 GPATCH8Q9UKJ3 1502 aaKnown RBP9.29□□□□□ -0.92
TTC28-208ENST00000612946 EXOC8Q8IYI6 725 aa9.29□□□□□ -0.92
TTC28-208ENST00000612946 BBS5Q8N3I7 341 aa9.29□□□□□ -0.92
TTC28-208ENST00000612946 MCM8Q9UJA3 840 aa9.29□□□□□ -0.92
TTC28-208ENST00000612946 DMPKQ09013 629 aa9.29□□□□□ -0.92
TTC28-208ENST00000612946 PRR23CQ6ZRP0 262 aa9.29□□□□□ -0.92
TTC28-208ENST00000612946 PLEKHM3Q6ZWE6 761 aa9.29□□□□□ -0.92
TTC28-208ENST00000612946 MOV10Q9HCE1 1003 aaKnown RBP9.29□□□□□ -0.92
TTC28-208ENST00000612946 NBPF26B4DH59 902 aa9.29□□□□□ -0.92
TTC28-208ENST00000612946 EYA2O00167 538 aa9.29□□□□□ -0.92
TTC28-208ENST00000612946 DNALI1O14645 258 aaPredicted RBP9.29□□□□□ -0.92
TTC28-208ENST00000612946 TPD52L2O43399 206 aaKnown RBP9.29□□□□□ -0.92
TTC28-208ENST00000612946 KRT1P04264 644 aa9.29□□□□□ -0.92
TTC28-208ENST00000612946 MESDQ14696 234 aa9.29□□□□□ -0.92
TTC28-208ENST00000612946 ZNF654Q8IZM8 581 aa9.29□□□□□ -0.92
TTC28-208ENST00000612946 NBPF15Q8N660 670 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms