RNA–Protein interactions for RNA: ENST00000612839.1

CCL3L3-201, Transcript of C-C motif chemokine ligand 3 like 3, humanhuman

TSL 1 (best)

Gene CCL3L3, Length 1,458 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3L3-201ENST00000612839 MYOGP15173 224 aa12.55□□□□□ -0.4
CCL3L3-201ENST00000612839 PTENP60484 403 aa12.55□□□□□ -0.4
CCL3L3-201ENST00000612839 NUCB2P80303 420 aa12.55□□□□□ -0.4
CCL3L3-201ENST00000612839 POU5F1BQ06416 359 aa12.55□□□□□ -0.4
CCL3L3-201ENST00000612839 DSC3Q14574 896 aa12.55□□□□□ -0.4
CCL3L3-201ENST00000612839 AXDND1Q5T1B0 1012 aaPredicted RBP12.55□□□□□ -0.4
CCL3L3-201ENST00000612839 FAM43BQ6ZT52 329 aaPredicted RBP12.55□□□□□ -0.4
CCL3L3-201ENST00000612839 SRGAP1Q7Z6B7 1085 aa12.55□□□□□ -0.4
CCL3L3-201ENST00000612839 DAW1Q8N136 415 aa12.55□□□□□ -0.4
CCL3L3-201ENST00000612839 CRIPAKQ8N1N5 446 aa12.55□□□□□ -0.4
CCL3L3-201ENST00000612839 RASSF8Q8NHQ8 419 aa12.55□□□□□ -0.4
CCL3L3-201ENST00000612839 BSNDQ8WZ55 320 aa12.55□□□□□ -0.4
CCL3L3-201ENST00000612839 NFKBIZQ9BYH8 718 aa12.55□□□□□ -0.4
CCL3L3-201ENST00000612839 INO80BQ9C086 356 aaPredicted RBP12.55□□□□□ -0.4
CCL3L3-201ENST00000612839 RCOR1Q9UKL0 485 aa12.55□□□□□ -0.4
CCL3L3-201ENST00000612839 YBX2Q9Y2T7 364 aaKnown RBP12.55□□□□□ -0.4
CCL3L3-201ENST00000612839 MYH11P35749 1972 aa12.54□□□□□ -0.4
CCL3L3-201ENST00000612839 A0A087X0B3 334 aa12.54□□□□□ -0.4
CCL3L3-201ENST00000612839 CUTAO60888 179 aa12.54□□□□□ -0.4
CCL3L3-201ENST00000612839 UPP2O95045 317 aa12.54□□□□□ -0.4
CCL3L3-201ENST00000612839 SSBP05455 408 aaKnown RBP eCLIP12.54□□□□□ -0.4
CCL3L3-201ENST00000612839 SFPQP23246 707 aaKnown RBP eCLIP12.54□□□□□ -0.4
CCL3L3-201ENST00000612839 ANP32AP39687 249 aaKnown RBP12.54□□□□□ -0.4
CCL3L3-201ENST00000612839 PHKA2P46019 1235 aa12.54□□□□□ -0.4
CCL3L3-201ENST00000612839 KRT85P78386 507 aa12.54□□□□□ -0.4
CCL3L3-201ENST00000612839 MAPK7Q13164 816 aa12.54□□□□□ -0.4
CCL3L3-201ENST00000612839 TFDP1Q14186 410 aa12.54□□□□□ -0.4
CCL3L3-201ENST00000612839 NAALADL2Q58DX5 795 aa12.54□□□□□ -0.4
CCL3L3-201ENST00000612839 GPR153Q6NV75 609 aa12.54□□□□□ -0.4
CCL3L3-201ENST00000612839 FAM117BQ6P1L5 589 aa12.54□□□□□ -0.4
CCL3L3-201ENST00000612839 SHC4Q6S5L8 630 aa12.54□□□□□ -0.4
CCL3L3-201ENST00000612839 TMEM92Q6UXU6 159 aa12.54□□□□□ -0.4
CCL3L3-201ENST00000612839 RAD54LQ92698 747 aa12.54□□□□□ -0.4
CCL3L3-201ENST00000612839 ADAM2Q99965 735 aa12.54□□□□□ -0.4
CCL3L3-201ENST00000612839 RGS18Q9NS28 235 aa12.54□□□□□ -0.4
CCL3L3-201ENST00000612839 CCDC39Q9UFE4 941 aa12.54□□□□□ -0.4
CCL3L3-201ENST00000612839 PCDHA7Q9UN72 937 aa12.54□□□□□ -0.4
CCL3L3-201ENST00000612839 PCDHA11Q9Y5I1 949 aa12.54□□□□□ -0.4
CCL3L3-201ENST00000612839 ATP6V1DQ9Y5K8 247 aa12.54□□□□□ -0.4
CCL3L3-201ENST00000612839 COL4A6Q14031 1691 aa12.53□□□□□ -0.4
CCL3L3-201ENST00000612839 DENND3A2RUS2 1198 aa12.53□□□□□ -0.4
CCL3L3-201ENST00000612839 C9IYK1 514 aa12.53□□□□□ -0.4
CCL3L3-201ENST00000612839 TLL1O43897 1013 aa12.53□□□□□ -0.4
CCL3L3-201ENST00000612839 HIP1RO75146 1068 aa12.53□□□□□ -0.4
CCL3L3-201ENST00000612839 NCLP19338 710 aaKnown RBP12.53□□□□□ -0.4
CCL3L3-201ENST00000612839 GUCY2CP25092 1073 aa12.53□□□□□ -0.4
CCL3L3-201ENST00000612839 TXLNAP40222 546 aa12.53□□□□□ -0.4
CCL3L3-201ENST00000612839 HTRA4P83105 476 aaPredicted RBP12.53□□□□□ -0.4
CCL3L3-201ENST00000612839 MBTD1Q05BQ5 628 aa12.53□□□□□ -0.4
CCL3L3-201ENST00000612839 MCM6Q14566 821 aa12.53□□□□□ -0.4
CCL3L3-201ENST00000612839 RAB30Q15771 203 aa12.53□□□□□ -0.4
CCL3L3-201ENST00000612839 ARSHQ5FYA8 562 aa12.53□□□□□ -0.4
CCL3L3-201ENST00000612839 SLC24A5Q71RS6 500 aa12.53□□□□□ -0.4
CCL3L3-201ENST00000612839 LEO1Q8WVC0 666 aaPredicted RBP12.53□□□□□ -0.4
CCL3L3-201ENST00000612839 LARP4BQ92615 738 aaKnown RBP12.53□□□□□ -0.4
CCL3L3-201ENST00000612839 KIFAP3Q92845 792 aa12.53□□□□□ -0.4
CCL3L3-201ENST00000612839 TIFAQ96CG3 184 aa12.53□□□□□ -0.4
CCL3L3-201ENST00000612839 ZBED2Q9BTP6 218 aa12.53□□□□□ -0.4
CCL3L3-201ENST00000612839 KCND2Q9NZV8 630 aa12.53□□□□□ -0.4
CCL3L3-201ENST00000612839 MSRAQ9UJ68 235 aa12.53□□□□□ -0.4
CCL3L3-201ENST00000612839 NPHP3-ACAD11A0A0J9YXS1 232 aa12.53□□□□□ -0.4
CCL3L3-201ENST00000612839 LCHNA4D1U4 455 aa12.53□□□□□ -0.4
CCL3L3-201ENST00000612839 LRRIQ4A6NIV6 560 aa12.53□□□□□ -0.4
CCL3L3-201ENST00000612839 INO80B-WBP1J3KQ70 363 aa12.53□□□□□ -0.4
CCL3L3-201ENST00000612839 ARHGEF15O94989 841 aa12.53□□□□□ -0.4
CCL3L3-201ENST00000612839 CA3P07451 260 aa12.53□□□□□ -0.4
CCL3L3-201ENST00000612839 ZSCAN20P17040 1043 aaPredicted RBP12.53□□□□□ -0.4
CCL3L3-201ENST00000612839 NAMPTP43490 491 aa12.53□□□□□ -0.4
CCL3L3-201ENST00000612839 ME1P48163 572 aa12.53□□□□□ -0.4
CCL3L3-201ENST00000612839 SARSP49591 514 aaKnown RBP12.53□□□□□ -0.4
CCL3L3-201ENST00000612839 RAD51AP2Q09MP3 1159 aa12.53□□□□□ -0.4
CCL3L3-201ENST00000612839 DHX8Q14562 1220 aaKnown RBP12.53□□□□□ -0.4
CCL3L3-201ENST00000612839 RRAGBQ5VZM2 374 aa12.53□□□□□ -0.4
CCL3L3-201ENST00000612839 CDCA2Q69YH5 1023 aaPredicted RBP12.53□□□□□ -0.4
CCL3L3-201ENST00000612839 CATSPER4Q7RTX7 472 aa12.53□□□□□ -0.4
CCL3L3-201ENST00000612839 SPATA32Q96LK8 384 aa12.53□□□□□ -0.4
CCL3L3-201ENST00000612839 RAD9AQ99638 391 aa12.53□□□□□ -0.4
CCL3L3-201ENST00000612839 TIPINQ9BVW5 301 aa12.53□□□□□ -0.4
CCL3L3-201ENST00000612839 PANK2Q9BZ23 570 aa12.53□□□□□ -0.4
CCL3L3-201ENST00000612839 NKX2-4Q9H2Z4 354 aa12.53□□□□□ -0.4
CCL3L3-201ENST00000612839 TTYH1Q9H313 450 aaPredicted RBP12.53□□□□□ -0.4
CCL3L3-201ENST00000612839 CHST12Q9NRB3 414 aa12.53□□□□□ -0.4
CCL3L3-201ENST00000612839 C1orf112Q9NSG2 853 aa12.53□□□□□ -0.4
CCL3L3-201ENST00000612839 AGPAT5Q9NUQ2 364 aa12.53□□□□□ -0.4
CCL3L3-201ENST00000612839 STK17AQ9UEE5 414 aa12.53□□□□□ -0.4
CCL3L3-201ENST00000612839 ADGRA3Q8IWK6 1321 aa12.52□□□□□ -0.41
CCL3L3-201ENST00000612839 SFI1A8K8P3 1242 aa12.52□□□□□ -0.41
CCL3L3-201ENST00000612839 TSPAN1O60635 241 aa12.52□□□□□ -0.41
CCL3L3-201ENST00000612839 HOXA11P31270 313 aaPredicted RBP12.52□□□□□ -0.41
CCL3L3-201ENST00000612839 PEX3P56589 373 aa12.52□□□□□ -0.41
CCL3L3-201ENST00000612839 FAM189BP81408 668 aa12.52□□□□□ -0.41
CCL3L3-201ENST00000612839 PPP2R5AQ15172 486 aa12.52□□□□□ -0.41
CCL3L3-201ENST00000612839 PCBP1Q15365 356 aaKnown RBP eCLIP12.52□□□□□ -0.41
CCL3L3-201ENST00000612839 AMHR2Q16671 573 aa12.52□□□□□ -0.41
CCL3L3-201ENST00000612839 CCDC73Q6ZRK6 1079 aa12.52□□□□□ -0.41
CCL3L3-201ENST00000612839 Q7L0L9 218 aa12.52□□□□□ -0.41
CCL3L3-201ENST00000612839 GPBP1Q86WP2 473 aa12.52□□□□□ -0.41
CCL3L3-201ENST00000612839 NPAS4Q8IUM7 802 aa12.52□□□□□ -0.41
CCL3L3-201ENST00000612839 PDILTQ8N807 584 aa12.52□□□□□ -0.41
CCL3L3-201ENST00000612839 IFT74Q96LB3 600 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms